RNA–Protein interactions for RNA: ENST00000397642.3

AL390728.1-201, humanhuman

BASIC

Gene AL390728.1, Length 1,941 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.1-201ENST00000397642 RFC4P35249 363 aa14.03□□□□□ -0.16
AL390728.1-201ENST00000397642 LMOD3Q0VAK6 560 aa14.03□□□□□ -0.16
AL390728.1-201ENST00000397642 GOLGB1Q14789 3259 aaKnown RBP14.02□□□□□ -0.16
AL390728.1-201ENST00000397642 UTRNP46939 3433 aa14.02□□□□□ -0.16
AL390728.1-201ENST00000397642 PNISRQ8TF01 805 aaKnown RBP14.02□□□□□ -0.16
AL390728.1-201ENST00000397642 TJP1Q07157 1748 aa14.02□□□□□ -0.16
AL390728.1-201ENST00000397642 UBR2Q8IWV8 1755 aa14.02□□□□□ -0.17
AL390728.1-201ENST00000397642 FHDC1Q9C0D6 1143 aaPredicted RBP14.02□□□□□ -0.17
AL390728.1-201ENST00000397642 APAF1O14727 1248 aa14.01□□□□□ -0.17
AL390728.1-201ENST00000397642 ZBTB1Q9Y2K1 713 aa14.01□□□□□ -0.17
AL390728.1-201ENST00000397642 SNRPA1P09661 255 aaKnown RBP14□□□□□ -0.17
AL390728.1-201ENST00000397642 CANXP27824 592 aaKnown RBP14□□□□□ -0.17
AL390728.1-201ENST00000397642 SYT17Q9BSW7 474 aa14□□□□□ -0.17
AL390728.1-201ENST00000397642 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
AL390728.1-201ENST00000397642 USP16Q9Y5T5 823 aa14□□□□□ -0.17
AL390728.1-201ENST00000397642 CICQ96RK0 1608 aaPredicted RBP14□□□□□ -0.17
AL390728.1-201ENST00000397642 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
AL390728.1-201ENST00000397642 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
AL390728.1-201ENST00000397642 A1BGP04217 495 aa13.99□□□□□ -0.17
AL390728.1-201ENST00000397642 KLHL34Q8N239 644 aa13.99□□□□□ -0.17
AL390728.1-201ENST00000397642 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
AL390728.1-201ENST00000397642 GYS1P13807 737 aa13.98□□□□□ -0.17
AL390728.1-201ENST00000397642 SRP68Q9UHB9 627 aaKnown RBP13.98□□□□□ -0.17
AL390728.1-201ENST00000397642 TSPYL4Q9UJ04 414 aa13.98□□□□□ -0.17
AL390728.1-201ENST00000397642 ZPR1O75312 459 aa13.98□□□□□ -0.17
AL390728.1-201ENST00000397642 EIF4A1P60842 406 aaKnown RBP13.98□□□□□ -0.17
AL390728.1-201ENST00000397642 EIF5P55010 431 aaKnown RBP13.97□□□□□ -0.17
AL390728.1-201ENST00000397642 ZNF330Q9Y3S2 320 aaPredicted RBP13.97□□□□□ -0.17
AL390728.1-201ENST00000397642 COL24A1Q17RW2 1714 aa13.97□□□□□ -0.17
AL390728.1-201ENST00000397642 USP42Q9H9J4 1324 aaKnown RBP13.96□□□□□ -0.17
AL390728.1-201ENST00000397642 GIGYF1O75420 1035 aaPredicted RBP13.96□□□□□ -0.17
AL390728.1-201ENST00000397642 MMP10P09238 476 aa13.96□□□□□ -0.17
AL390728.1-201ENST00000397642 NPM2Q86SE8 214 aaKnown RBP13.96□□□□□ -0.17
AL390728.1-201ENST00000397642 BABAM1Q9NWV8 329 aa13.96□□□□□ -0.17
AL390728.1-201ENST00000397642 LAS1LQ9Y4W2 734 aaKnown RBP13.96□□□□□ -0.17
AL390728.1-201ENST00000397642 COL15A1P39059 1388 aa13.96□□□□□ -0.17
AL390728.1-201ENST00000397642 SENP3-EIF4A1A0A087X0R7 540 aa13.96□□□□□ -0.18
AL390728.1-201ENST00000397642 PIP4K2AP48426 406 aaPredicted RBP13.96□□□□□ -0.18
AL390728.1-201ENST00000397642 IL6STP40189 918 aaPredicted RBP13.95□□□□□ -0.18
AL390728.1-201ENST00000397642 FKBP8Q14318 412 aa13.95□□□□□ -0.18
AL390728.1-201ENST00000397642 USPL1Q5W0Q7 1092 aa13.95□□□□□ -0.18
AL390728.1-201ENST00000397642 NARFQ9UHQ1 456 aa13.95□□□□□ -0.18
AL390728.1-201ENST00000397642 CHL1O00533 1208 aa13.94□□□□□ -0.18
AL390728.1-201ENST00000397642 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
AL390728.1-201ENST00000397642 A0A087WZG4 1122 aa13.94□□□□□ -0.18
AL390728.1-201ENST00000397642 TBC1D2BQ9UPU7 963 aa13.94□□□□□ -0.18
AL390728.1-201ENST00000397642 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
AL390728.1-201ENST00000397642 C4AP0C0L4 1744 aa13.93□□□□□ -0.18
AL390728.1-201ENST00000397642 KDM3BQ7LBC6 1761 aa13.93□□□□□ -0.18
AL390728.1-201ENST00000397642 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
AL390728.1-201ENST00000397642 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
AL390728.1-201ENST00000397642 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
AL390728.1-201ENST00000397642 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
AL390728.1-201ENST00000397642 NLGN2Q8NFZ4 835 aa13.92□□□□□ -0.18
AL390728.1-201ENST00000397642 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
AL390728.1-201ENST00000397642 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
AL390728.1-201ENST00000397642 TM4SF1P30408 202 aa13.91□□□□□ -0.18
AL390728.1-201ENST00000397642 CALD1Q05682 793 aaKnown RBP13.91□□□□□ -0.18
AL390728.1-201ENST00000397642 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
AL390728.1-201ENST00000397642 EIF2S2P20042 333 aaKnown RBP13.9□□□□□ -0.18
AL390728.1-201ENST00000397642 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.18
AL390728.1-201ENST00000397642 DDR1Q08345 913 aa13.9□□□□□ -0.18
AL390728.1-201ENST00000397642 NFIXQ14938 502 aa13.9□□□□□ -0.18
AL390728.1-201ENST00000397642 KRT24Q2M2I5 525 aa13.9□□□□□ -0.18
AL390728.1-201ENST00000397642 ZNF853P0CG23 659 aa13.89□□□□□ -0.19
AL390728.1-201ENST00000397642 GNAI1P63096 354 aa13.89□□□□□ -0.19
AL390728.1-201ENST00000397642 CCDC27Q2M243 656 aa13.89□□□□□ -0.19
AL390728.1-201ENST00000397642 WWC1Q8IX03 1113 aa13.89□□□□□ -0.19
AL390728.1-201ENST00000397642 NGEFQ8N5V2 710 aa13.89□□□□□ -0.19
AL390728.1-201ENST00000397642 MBIPQ9NS73 344 aa13.89□□□□□ -0.19
AL390728.1-201ENST00000397642 IFT57Q9NWB7 429 aa13.89□□□□□ -0.19
AL390728.1-201ENST00000397642 SALL2Q9Y467 1007 aaPredicted RBP13.89□□□□□ -0.19
AL390728.1-201ENST00000397642 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
AL390728.1-201ENST00000397642 CAMTA2O94983 1202 aa13.88□□□□□ -0.19
AL390728.1-201ENST00000397642 MYL6BP14649 208 aa13.88□□□□□ -0.19
AL390728.1-201ENST00000397642 BICDL1Q6ZP65 573 aa13.88□□□□□ -0.19
AL390728.1-201ENST00000397642 NECTIN2Q92692 538 aa13.88□□□□□ -0.19
AL390728.1-201ENST00000397642 GPR162Q16538 588 aa13.87□□□□□ -0.19
AL390728.1-201ENST00000397642 TBC1D9BQ66K14 1250 aa13.87□□□□□ -0.19
AL390728.1-201ENST00000397642 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
AL390728.1-201ENST00000397642 SERPINB2P05120 415 aa13.86□□□□□ -0.19
AL390728.1-201ENST00000397642 CLEC4GQ6UXB4 293 aa13.86□□□□□ -0.19
AL390728.1-201ENST00000397642 ERBB4Q15303 1308 aa13.86□□□□□ -0.19
AL390728.1-201ENST00000397642 CCER2I3L3R5 266 aa13.85□□□□□ -0.19
AL390728.1-201ENST00000397642 TGFB2P61812 414 aa13.85□□□□□ -0.19
AL390728.1-201ENST00000397642 PDIA6Q15084 440 aa13.85□□□□□ -0.19
AL390728.1-201ENST00000397642 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
AL390728.1-201ENST00000397642 SETDB2Q96T68 719 aa13.85□□□□□ -0.19
AL390728.1-201ENST00000397642 ZNF652Q9Y2D9 606 aa13.85□□□□□ -0.19
AL390728.1-201ENST00000397642 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
AL390728.1-201ENST00000397642 ELL2O00472 640 aaPredicted RBP13.84□□□□□ -0.19
AL390728.1-201ENST00000397642 ANXA1P04083 346 aa13.84□□□□□ -0.19
AL390728.1-201ENST00000397642 HOXB7P09629 217 aa13.84□□□□□ -0.19
AL390728.1-201ENST00000397642 PROSER3Q2NL68 480 aa13.84□□□□□ -0.19
AL390728.1-201ENST00000397642 WWC3Q9ULE0 1092 aa13.84□□□□□ -0.19
AL390728.1-201ENST00000397642 A0A0G2JLW4 131 aa13.84□□□□□ -0.19
AL390728.1-201ENST00000397642 HDGFL1Q5TGJ6 251 aa13.84□□□□□ -0.19
AL390728.1-201ENST00000397642 TTLL7Q6ZT98 887 aa13.84□□□□□ -0.19
AL390728.1-201ENST00000397642 C10orf71Q711Q0 1435 aa13.83□□□□□ -0.2
AL390728.1-201ENST00000397642 HLFQ16534 295 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms