RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 AMIGO3Q86WK7 504 aa38.28■■■■□ 3.72
CHCHD4-202ENST00000396914 IFT57Q9NWB7 429 aa38.28■■■■□ 3.72
CHCHD4-202ENST00000396914 UBR3Q6ZT12 1888 aa38.28■■■■□ 3.72
CHCHD4-202ENST00000396914 ZBTB7AO95365 584 aa38.27■■■■□ 3.72
CHCHD4-202ENST00000396914 SSFA2P28290 1259 aa38.27■■■■□ 3.72
CHCHD4-202ENST00000396914 INTS5Q6P9B9 1019 aaKnown RBP38.27■■■■□ 3.72
CHCHD4-202ENST00000396914 CASZ1Q86V15 1759 aa38.26■■■■□ 3.72
CHCHD4-202ENST00000396914 RPS6KA4O75676 772 aa38.26■■■■□ 3.72
CHCHD4-202ENST00000396914 USP16Q9Y5T5 823 aa38.26■■■■□ 3.72
CHCHD4-202ENST00000396914 TRAPPC3LQ5T215 181 aa38.25■■■■□ 3.71
CHCHD4-202ENST00000396914 MYH14Q7Z406 1995 aaKnown RBP38.25■■■■□ 3.71
CHCHD4-202ENST00000396914 CANXP27824 592 aaKnown RBP38.24■■■■□ 3.71
CHCHD4-202ENST00000396914 NGEFQ8N5V2 710 aa38.24■■■■□ 3.71
CHCHD4-202ENST00000396914 MBIPQ9NS73 344 aa38.23■■■■□ 3.71
CHCHD4-202ENST00000396914 ZBTB1Q9Y2K1 713 aa38.23■■■■□ 3.71
CHCHD4-202ENST00000396914 GIGYF1O75420 1035 aaPredicted RBP38.22■■■■□ 3.71
CHCHD4-202ENST00000396914 ATF5Q9Y2D1 282 aaPredicted RBP38.21■■■■□ 3.71
CHCHD4-202ENST00000396914 ZNF853P0CG23 659 aa38.21■■■■□ 3.71
CHCHD4-202ENST00000396914 ZNF330Q9Y3S2 320 aaPredicted RBP38.21■■■■□ 3.71
CHCHD4-202ENST00000396914 A1BGP04217 495 aa38.2■■■■□ 3.71
CHCHD4-202ENST00000396914 RFC4P35249 363 aa38.19■■■■□ 3.7
CHCHD4-202ENST00000396914 ADRA2BP18089 450 aa38.18■■■■□ 3.7
CHCHD4-202ENST00000396914 NPM2Q86SE8 214 aaKnown RBP38.18■■■■□ 3.7
CHCHD4-202ENST00000396914 WDR63Q8IWG1 891 aa38.18■■■■□ 3.7
CHCHD4-202ENST00000396914 SLC16A10Q8TF71 515 aa38.18■■■■□ 3.7
CHCHD4-202ENST00000396914 ARHGEF1Q92888 912 aaKnown RBP38.18■■■■□ 3.7
CHCHD4-202ENST00000396914 MTFR1LQ9H019 292 aa38.18■■■■□ 3.7
CHCHD4-202ENST00000396914 SPON1Q9HCB6 807 aa38.18■■■■□ 3.7
CHCHD4-202ENST00000396914 KRT24Q2M2I5 525 aa38.16■■■■□ 3.7
CHCHD4-202ENST00000396914 IL16Q14005 1332 aa38.16■■■■□ 3.7
CHCHD4-202ENST00000396914 PIP4K2AP48426 406 aaPredicted RBP38.15■■■■□ 3.7
CHCHD4-202ENST00000396914 TSR2Q969E8 191 aaKnown RBP38.15■■■■□ 3.7
CHCHD4-202ENST00000396914 SOS1Q07889 1333 aaPredicted RBP38.15■■■■□ 3.7
CHCHD4-202ENST00000396914 LAMB4A4D0S4 1761 aa38.14■■■■□ 3.7
CHCHD4-202ENST00000396914 EIF2S2P20042 333 aaKnown RBP38.14■■■■□ 3.7
CHCHD4-202ENST00000396914 MSL1Q68DK7 614 aa38.13■■■■□ 3.7
CHCHD4-202ENST00000396914 ARXQ96QS3 562 aa38.13■■■■□ 3.7
CHCHD4-202ENST00000396914 COL15A1P39059 1388 aa38.11■■■■□ 3.69
CHCHD4-202ENST00000396914 NECTIN2Q92692 538 aa38.11■■■■□ 3.69
CHCHD4-202ENST00000396914 IL6STP40189 918 aaPredicted RBP38.09■■■■□ 3.69
CHCHD4-202ENST00000396914 ELL2O00472 640 aaPredicted RBP38.08■■■■□ 3.69
CHCHD4-202ENST00000396914 ZPR1O75312 459 aa38.08■■■■□ 3.69
CHCHD4-202ENST00000396914 EIF5P55010 431 aaKnown RBP38.08■■■■□ 3.69
CHCHD4-202ENST00000396914 DUSP27Q5VZP5 1158 aa38.07■■■■□ 3.69
CHCHD4-202ENST00000396914 A0A087WZG4 1122 aa38.06■■■■□ 3.68
CHCHD4-202ENST00000396914 SRP68Q9UHB9 627 aaKnown RBP38.06■■■■□ 3.68
CHCHD4-202ENST00000396914 C4AP0C0L4 1744 aa38.06■■■■□ 3.68
CHCHD4-202ENST00000396914 POLD1P28340 1107 aa38.05■■■■□ 3.68
CHCHD4-202ENST00000396914 PPP1R1BQ9UD71 204 aaPredicted RBP38.05■■■■□ 3.68
CHCHD4-202ENST00000396914 NBPF26B4DH59 902 aa38.04■■■■□ 3.68
CHCHD4-202ENST00000396914 MYL6BP14649 208 aa38.04■■■■□ 3.68
CHCHD4-202ENST00000396914 NBPF10Q6P3W6 841 aaKnown RBP38.04■■■■□ 3.68
CHCHD4-202ENST00000396914 NBPF15Q8N660 670 aa38.04■■■■□ 3.68
CHCHD4-202ENST00000396914 MYH16Q9H6N6 1097 aa38.04■■■■□ 3.68
CHCHD4-202ENST00000396914 FANCIQ9NVI1 1328 aa38.03■■■■□ 3.68
CHCHD4-202ENST00000396914 GOLGA2Q08379 1002 aa38.03■■■■□ 3.68
CHCHD4-202ENST00000396914 HDGFL1Q5TGJ6 251 aa38.03■■■■□ 3.68
CHCHD4-202ENST00000396914 C8orf58Q8NAV2 365 aa38.03■■■■□ 3.68
CHCHD4-202ENST00000396914 ZNF521Q96K83 1311 aa38.02■■■■□ 3.68
CHCHD4-202ENST00000396914 USP42Q9H9J4 1324 aaKnown RBP38.02■■■■□ 3.68
CHCHD4-202ENST00000396914 HOXB7P09629 217 aa38.02■■■■□ 3.68
CHCHD4-202ENST00000396914 HNRNPUQ00839 825 aaKnown RBP eCLIP38.02■■■■□ 3.68
CHCHD4-202ENST00000396914 USPL1Q5W0Q7 1092 aa38.02■■■■□ 3.68
CHCHD4-202ENST00000396914 SPINK5Q9NQ38 1064 aaPredicted RBP38.02■■■■□ 3.68
CHCHD4-202ENST00000396914 TBC1D2BQ9UPU7 963 aa38.02■■■■□ 3.68
CHCHD4-202ENST00000396914 LRP5O75197 1615 aa38■■■■□ 3.67
CHCHD4-202ENST00000396914 PTGER2P43116 358 aa38■■■■□ 3.67
CHCHD4-202ENST00000396914 NARFQ9UHQ1 456 aa38■■■■□ 3.67
CHCHD4-202ENST00000396914 GYS1P13807 737 aa37.99■■■■□ 3.67
CHCHD4-202ENST00000396914 DZIP3Q86Y13 1208 aaKnown RBP37.98■■■■□ 3.67
CHCHD4-202ENST00000396914 NLGN1Q8N2Q7 840 aa37.98■■■■□ 3.67
CHCHD4-202ENST00000396914 ERBB4Q15303 1308 aa37.98■■■■□ 3.67
CHCHD4-202ENST00000396914 TSPYL6Q8N831 410 aa37.96■■■■□ 3.67
CHCHD4-202ENST00000396914 ANXA1P04083 346 aa37.95■■■■□ 3.67
CHCHD4-202ENST00000396914 EXOSC9Q06265 439 aaKnown RBP37.94■■■■□ 3.66
CHCHD4-202ENST00000396914 FKBP8Q14318 412 aa37.94■■■■□ 3.66
CHCHD4-202ENST00000396914 TWISTNBQ3B726 338 aaPredicted RBP37.94■■■■□ 3.66
CHCHD4-202ENST00000396914 SGIP1Q9BQI5 828 aa37.94■■■■□ 3.66
CHCHD4-202ENST00000396914 CHPF2Q9P2E5 772 aa37.94■■■■□ 3.66
CHCHD4-202ENST00000396914 E9PSI1 815 aa37.92■■■■□ 3.66
CHCHD4-202ENST00000396914 PROSER3Q2NL68 480 aa37.92■■■■□ 3.66
CHCHD4-202ENST00000396914 MMP10P09238 476 aa37.91■■■■□ 3.66
CHCHD4-202ENST00000396914 CHMP4AQ9BY43 222 aa37.91■■■■□ 3.66
CHCHD4-202ENST00000396914 SRCAPQ6ZRS2 3230 aa37.91■■■■□ 3.66
CHCHD4-202ENST00000396914 PDIA6Q15084 440 aa37.9■■■■□ 3.66
CHCHD4-202ENST00000396914 KIF6Q6ZMV9 814 aa37.9■■■■□ 3.66
CHCHD4-202ENST00000396914 KLHL34Q8N239 644 aa37.9■■■■□ 3.66
CHCHD4-202ENST00000396914 DDX21Q9NR30 783 aaKnown RBP eCLIP37.9■■■■□ 3.66
CHCHD4-202ENST00000396914 DBF4Q9UBU7 674 aaPredicted RBP37.9■■■■□ 3.66
CHCHD4-202ENST00000396914 CCDC30Q5VVM6 783 aa37.88■■■■□ 3.66
CHCHD4-202ENST00000396914 CDCA7LQ96GN5 454 aa37.88■■■■□ 3.66
CHCHD4-202ENST00000396914 COL24A1Q17RW2 1714 aa37.88■■■■□ 3.65
CHCHD4-202ENST00000396914 CAMTA2O94983 1202 aa37.87■■■■□ 3.65
CHCHD4-202ENST00000396914 AIMP1Q12904 312 aaKnown RBP37.87■■■■□ 3.65
CHCHD4-202ENST00000396914 SLFN5Q08AF3 891 aa37.87■■■■□ 3.65
CHCHD4-202ENST00000396914 BICDL1Q6ZP65 573 aa37.87■■■■□ 3.65
CHCHD4-202ENST00000396914 BCL2L12Q9HB09 334 aa37.87■■■■□ 3.65
CHCHD4-202ENST00000396914 PARP3Q9Y6F1 533 aa37.87■■■■□ 3.65
CHCHD4-202ENST00000396914 TTLL7Q6ZT98 887 aa37.86■■■■□ 3.65
CHCHD4-202ENST00000396914 ZNF652Q9Y2D9 606 aa37.85■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms