RNA–Protein interactions for RNA: ENST00000395397.7

NR1H3-201, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-201ENST00000395397 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
NR1H3-201ENST00000395397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.52■□□□□ 0.24
NR1H3-201ENST00000395397 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
NR1H3-201ENST00000395397 LRRFIP2Q9Y608 721 aaKnown RBP16.52■□□□□ 0.24
NR1H3-201ENST00000395397 TUBGCP6Q96RT7 1819 aa16.52■□□□□ 0.23
NR1H3-201ENST00000395397 NUTM2BA6NNL0 878 aaPredicted RBP16.51■□□□□ 0.23
NR1H3-201ENST00000395397 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
NR1H3-201ENST00000395397 NUTM2EB1AL46 878 aaPredicted RBP16.51■□□□□ 0.23
NR1H3-201ENST00000395397 MX1P20591 662 aa16.51■□□□□ 0.23
NR1H3-201ENST00000395397 SKOR2Q2VWA4 1001 aaPredicted RBP16.51■□□□□ 0.23
NR1H3-201ENST00000395397 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
NR1H3-201ENST00000395397 ANKRD24Q8TF21 1146 aa16.51■□□□□ 0.23
NR1H3-201ENST00000395397 GBP4Q96PP9 640 aa16.51■□□□□ 0.23
NR1H3-201ENST00000395397 PHAXQ9H814 394 aaKnown RBP16.51■□□□□ 0.23
NR1H3-201ENST00000395397 FSD2A1L4K1 749 aa16.5■□□□□ 0.23
NR1H3-201ENST00000395397 ANAPC15P60006 121 aa16.5■□□□□ 0.23
NR1H3-201ENST00000395397 HSP90AB4PQ58FF6 505 aa16.5■□□□□ 0.23
NR1H3-201ENST00000395397 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
NR1H3-201ENST00000395397 SPRYD3Q8NCJ5 442 aa16.5■□□□□ 0.23
NR1H3-201ENST00000395397 EXOC6BQ9Y2D4 811 aa16.5■□□□□ 0.23
NR1H3-201ENST00000395397 TRAK2O60296 914 aa16.5■□□□□ 0.23
NR1H3-201ENST00000395397 GIGYF1O75420 1035 aaPredicted RBP16.5■□□□□ 0.23
NR1H3-201ENST00000395397 TNPO1Q92973 898 aaKnown RBP16.5■□□□□ 0.23
NR1H3-201ENST00000395397 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
NR1H3-201ENST00000395397 SRCAPQ6ZRS2 3230 aa16.49■□□□□ 0.23
NR1H3-201ENST00000395397 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
NR1H3-201ENST00000395397 ALS2Q96Q42 1657 aa16.49■□□□□ 0.23
NR1H3-201ENST00000395397 LRRC59Q96AG4 307 aaKnown RBP16.49■□□□□ 0.23
NR1H3-201ENST00000395397 AHDC1Q5TGY3 1603 aaPredicted RBP16.49■□□□□ 0.23
NR1H3-201ENST00000395397 AFF2P51816 1311 aa16.48■□□□□ 0.23
NR1H3-201ENST00000395397 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
NR1H3-201ENST00000395397 SIPA1L3O60292 1781 aaPredicted RBP16.48■□□□□ 0.23
NR1H3-201ENST00000395397 ST18O60284 1047 aa16.48■□□□□ 0.23
NR1H3-201ENST00000395397 MCM2P49736 904 aa16.48■□□□□ 0.23
NR1H3-201ENST00000395397 NUCB2P80303 420 aa16.48■□□□□ 0.23
NR1H3-201ENST00000395397 ESYT1Q9BSJ8 1104 aa16.48■□□□□ 0.23
NR1H3-201ENST00000395397 CHMLP26374 656 aa16.47■□□□□ 0.23
NR1H3-201ENST00000395397 KSR2Q6VAB6 950 aa16.47■□□□□ 0.23
NR1H3-201ENST00000395397 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
NR1H3-201ENST00000395397 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
NR1H3-201ENST00000395397 HYPKQ9NX55 129 aa16.47■□□□□ 0.23
NR1H3-201ENST00000395397 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
NR1H3-201ENST00000395397 UTYO14607 1347 aa16.47■□□□□ 0.23
NR1H3-201ENST00000395397 ERBB3P21860 1342 aa16.47■□□□□ 0.23
NR1H3-201ENST00000395397 ADCY9O60503 1353 aa16.47■□□□□ 0.23
NR1H3-201ENST00000395397 PI4KAP2A4QPH2 592 aa16.46■□□□□ 0.23
NR1H3-201ENST00000395397 KCNQ3O43525 872 aa16.46■□□□□ 0.23
NR1H3-201ENST00000395397 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
NR1H3-201ENST00000395397 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
NR1H3-201ENST00000395397 PI4KAP1Q8N8J0 262 aa16.46■□□□□ 0.23
NR1H3-201ENST00000395397 NECTIN2Q92692 538 aa16.46■□□□□ 0.23
NR1H3-201ENST00000395397 AXIN2Q9Y2T1 843 aa16.46■□□□□ 0.23
NR1H3-201ENST00000395397 APBB1O00213 710 aa16.45■□□□□ 0.22
NR1H3-201ENST00000395397 HSP90AA1P07900 732 aaKnown RBP16.45■□□□□ 0.22
NR1H3-201ENST00000395397 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
NR1H3-201ENST00000395397 RHPN1Q8TCX5 695 aa16.45■□□□□ 0.22
NR1H3-201ENST00000395397 ATF3P18847 181 aa16.45■□□□□ 0.22
NR1H3-201ENST00000395397 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
NR1H3-201ENST00000395397 CADPS2Q86UW7 1296 aa16.45■□□□□ 0.22
NR1H3-201ENST00000395397 PXDNQ92626 1479 aa16.44■□□□□ 0.22
NR1H3-201ENST00000395397 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
NR1H3-201ENST00000395397 QTRT2Q9H974 415 aaKnown RBP16.44■□□□□ 0.22
NR1H3-201ENST00000395397 DDX21Q9NR30 783 aaKnown RBP eCLIP16.44■□□□□ 0.22
NR1H3-201ENST00000395397 SURF6O75683 361 aaKnown RBP16.43■□□□□ 0.22
NR1H3-201ENST00000395397 MCCP23508 829 aa16.43■□□□□ 0.22
NR1H3-201ENST00000395397 TTC41PQ6P2S7 1318 aa16.43■□□□□ 0.22
NR1H3-201ENST00000395397 LINS1Q8NG48 757 aa16.42■□□□□ 0.22
NR1H3-201ENST00000395397 COL18A1P39060 1754 aa16.42■□□□□ 0.22
NR1H3-201ENST00000395397 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
NR1H3-201ENST00000395397 SRGAP3O43295 1099 aa16.41■□□□□ 0.22
NR1H3-201ENST00000395397 PI4K2BQ8TCG2 481 aa16.41■□□□□ 0.22
NR1H3-201ENST00000395397 GOLGA6L22H0YM25 854 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 DDX58O95786 925 aaKnown RBP16.4■□□□□ 0.22
NR1H3-201ENST00000395397 CUL4AQ13619 759 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 INTS4Q96HW7 963 aaKnown RBP16.4■□□□□ 0.22
NR1H3-201ENST00000395397 C8orf37Q96NL8 207 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 CPDO75976 1380 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 MRE11P49959 708 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 PDIA6Q15084 440 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 BRINP3Q76B58 766 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
NR1H3-201ENST00000395397 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.21
NR1H3-201ENST00000395397 XPCQ01831 940 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-201ENST00000395397 BRPF3Q9ULD4 1205 aa16.39■□□□□ 0.21
NR1H3-201ENST00000395397 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
NR1H3-201ENST00000395397 SCN11AQ9UI33 1791 aa16.38■□□□□ 0.21
NR1H3-201ENST00000395397 CRYBG1Q9Y4K1 1723 aa16.38■□□□□ 0.21
NR1H3-201ENST00000395397 BAG4O95429 457 aaKnown RBP16.38■□□□□ 0.21
NR1H3-201ENST00000395397 PHKG2P15735 406 aa16.38■□□□□ 0.21
NR1H3-201ENST00000395397 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
NR1H3-201ENST00000395397 HSPA4P34932 840 aa16.38■□□□□ 0.21
NR1H3-201ENST00000395397 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
NR1H3-201ENST00000395397 MRC1P22897 1456 aa16.38■□□□□ 0.21
NR1H3-201ENST00000395397 COL15A1P39059 1388 aa16.37■□□□□ 0.21
NR1H3-201ENST00000395397 ZBTB7CA1YPR0 619 aa16.37■□□□□ 0.21
NR1H3-201ENST00000395397 TRIM6-TRIM34B2RNG4 842 aa16.37■□□□□ 0.21
NR1H3-201ENST00000395397 GLRX3O76003 335 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms