RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 ESPNB1AK53 854 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 ZNF830Q96NB3 372 aaPredicted RBP14.18□□□□□ -0.14
SIN3A-202ENST00000394947 CECR2Q9BXF3 1484 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 NLRP5P59047 1200 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 USHBP1Q8N6Y0 703 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 USP25Q9UHP3 1055 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 DHX57Q6P158 1386 aaKnown RBP14.18□□□□□ -0.14
SIN3A-202ENST00000394947 MIA2Q96PC5 1412 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 FLIIQ13045 1269 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 DZIP1Q86YF9 867 aaKnown RBP14.18□□□□□ -0.14
SIN3A-202ENST00000394947 BICD1Q96G01 975 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 CCDC63Q8NA47 563 aa14.17□□□□□ -0.14
SIN3A-202ENST00000394947 TMOD2Q9NZR1 351 aa14.17□□□□□ -0.14
SIN3A-202ENST00000394947 ZC3H6P61129 1189 aaKnown RBP14.17□□□□□ -0.14
SIN3A-202ENST00000394947 CCDC8Q9H0W5 538 aaPredicted RBP14.17□□□□□ -0.14
SIN3A-202ENST00000394947 CEP126Q9P2H0 1117 aa14.17□□□□□ -0.14
SIN3A-202ENST00000394947 TFIP11Q9UBB9 837 aaKnown RBP14.17□□□□□ -0.14
SIN3A-202ENST00000394947 FAM69CQ0P6D2 419 aa14.17□□□□□ -0.14
SIN3A-202ENST00000394947 MAP9Q49MG5 647 aa14.17□□□□□ -0.14
SIN3A-202ENST00000394947 CNNM3Q8NE01 707 aa14.17□□□□□ -0.14
SIN3A-202ENST00000394947 VTI1AQ96AJ9 217 aa14.16□□□□□ -0.14
SIN3A-202ENST00000394947 MYD88Q99836 296 aa14.16□□□□□ -0.14
SIN3A-202ENST00000394947 FSD2A1L4K1 749 aa14.16□□□□□ -0.14
SIN3A-202ENST00000394947 FAM160A1Q05DH4 1040 aa14.16□□□□□ -0.14
SIN3A-202ENST00000394947 JARID2Q92833 1246 aaPredicted RBP14.16□□□□□ -0.14
SIN3A-202ENST00000394947 SMARCC1Q92922 1105 aaPredicted RBP14.16□□□□□ -0.14
SIN3A-202ENST00000394947 TSNARE1Q96NA8 513 aa14.16□□□□□ -0.14
SIN3A-202ENST00000394947 CCDC40Q4G0X9 1142 aa14.16□□□□□ -0.14
SIN3A-202ENST00000394947 FBF1Q8TES7 1133 aa14.16□□□□□ -0.14
SIN3A-202ENST00000394947 SSX2IPQ9Y2D8 614 aa14.16□□□□□ -0.14
SIN3A-202ENST00000394947 THUMPD2Q9BTF0 503 aaKnown RBP14.16□□□□□ -0.14
SIN3A-202ENST00000394947 IDEP14735 1019 aa14.16□□□□□ -0.14
SIN3A-202ENST00000394947 PPP2R1AP30153 589 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 PAFAH1B1P43034 410 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 CCT4P50991 539 aaKnown RBP14.15□□□□□ -0.14
SIN3A-202ENST00000394947 KIF18AQ8NI77 898 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 CUL5Q93034 780 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 FAM212AQ96EL1 285 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 FAM170AA1A519 330 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 ANKRD18BA2A2Z9 1011 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 CCDC6Q16204 474 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 ZNF444Q8N0Y2 327 aaPredicted RBP14.15□□□□□ -0.14
SIN3A-202ENST00000394947 RAB3IL1Q8TBN0 382 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 WASF1Q92558 559 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 SYNCQ9H7C4 482 aa14.15□□□□□ -0.14
SIN3A-202ENST00000394947 ZSCAN12O43309 604 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 VPS36Q86VN1 386 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 ZNF644Q9H582 1327 aaPredicted RBP14.14□□□□□ -0.15
SIN3A-202ENST00000394947 HAND2P61296 217 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 C8orf76Q96K31 380 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 NAPBQ9H115 298 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 CCDC88BA6NC98 1476 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 SH3BP5O60239 455 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 MNAT1P51948 309 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 ARID5AQ03989 594 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 SSRP1Q08945 709 aaKnown RBP14.14□□□□□ -0.15
SIN3A-202ENST00000394947 PTGS1P23219 599 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 MCM4P33991 863 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 CFAP70Q5T0N1 1121 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 PROCA1Q8NCQ7 364 aaPredicted RBP14.14□□□□□ -0.15
SIN3A-202ENST00000394947 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
SIN3A-202ENST00000394947 USO1O60763 962 aaKnown RBP14.13□□□□□ -0.15
SIN3A-202ENST00000394947 NAA25Q14CX7 972 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 CDK19Q9BWU1 502 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 IKBKGQ9Y6K9 419 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 DNAJC21Q5F1R6 531 aaKnown RBP14.13□□□□□ -0.15
SIN3A-202ENST00000394947 JPH4Q96JJ6 628 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 SLC12A7Q9Y666 1083 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 CTNNA3Q9UI47 895 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 GBP3Q9H0R5 595 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 HYPKQ9NX55 129 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 CABP1Q9NZU7 370 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 SPG7Q9UQ90 795 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 ATP2B3Q16720 1220 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 MCM10Q7L590 875 aa14.13□□□□□ -0.15
SIN3A-202ENST00000394947 SSFA2P28290 1259 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 TPD52P55327 224 aaPredicted RBP14.12□□□□□ -0.15
SIN3A-202ENST00000394947 MICALCLQ6ZW33 695 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 NAP1L3Q99457 506 aaPredicted RBP14.12□□□□□ -0.15
SIN3A-202ENST00000394947 FSIP1Q8NA03 581 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 SELENOSQ9BQE4 189 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 SLC12A5Q9H2X9 1139 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 YEATS4O95619 227 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 GOLGA8BA8MQT2 603 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 CLGNO14967 610 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 GPTP24298 496 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 DAAM2Q86T65 1068 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 CCDC7Q96M83 1385 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 CAVIN4Q5BKX8 364 aa14.12□□□□□ -0.15
SIN3A-202ENST00000394947 MAP3K9P80192 1104 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 DNAI2Q9GZS0 605 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 IFIT1P09914 478 aaKnown RBP14.11□□□□□ -0.15
SIN3A-202ENST00000394947 CFAP57Q96MR6 1250 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 ANO10Q9NW15 660 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.11□□□□□ -0.15
SIN3A-202ENST00000394947 V9GYY5 206 aaPredicted RBP14.11□□□□□ -0.15
SIN3A-202ENST00000394947 TTC36A6NLP5 189 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 ZPR1O75312 459 aa14.11□□□□□ -0.15
SIN3A-202ENST00000394947 TMEM266Q2M3C6 531 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms