RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 UBR3Q6ZT12 1888 aa32.9■■■□□ 2.86
HOMER3-202ENST00000392351 CRKLP46109 303 aaKnown RBP32.9■■■□□ 2.86
HOMER3-202ENST00000392351 AKT1S1Q96B36 256 aa32.9■■■□□ 2.86
HOMER3-202ENST00000392351 STK32BQ9NY57 414 aa32.9■■■□□ 2.86
HOMER3-202ENST00000392351 CNTNAP4Q9C0A0 1308 aa32.9■■■□□ 2.86
HOMER3-202ENST00000392351 AK7Q96M32 723 aa32.89■■■□□ 2.86
HOMER3-202ENST00000392351 YTHDC1Q96MU7 727 aaKnown RBP32.89■■■□□ 2.86
HOMER3-202ENST00000392351 DUSP27Q5VZP5 1158 aa32.87■■■□□ 2.85
HOMER3-202ENST00000392351 C8orf58Q8NAV2 365 aa32.87■■■□□ 2.85
HOMER3-202ENST00000392351 ELL2O00472 640 aaPredicted RBP32.87■■■□□ 2.85
HOMER3-202ENST00000392351 SLC15A2Q16348 729 aa32.87■■■□□ 2.85
HOMER3-202ENST00000392351 RC3H1Q5TC82 1133 aaKnown RBP32.87■■■□□ 2.85
HOMER3-202ENST00000392351 CCDC87Q9NVE4 849 aa32.86■■■□□ 2.85
HOMER3-202ENST00000392351 QSER1Q2KHR3 1735 aa32.86■■■□□ 2.85
HOMER3-202ENST00000392351 GNPATO15228 680 aa32.85■■■□□ 2.85
HOMER3-202ENST00000392351 TFCP2L1Q9NZI6 479 aa32.85■■■□□ 2.85
HOMER3-202ENST00000392351 HOXB7P09629 217 aa32.84■■■□□ 2.85
HOMER3-202ENST00000392351 EXOSC9Q06265 439 aaKnown RBP32.84■■■□□ 2.85
HOMER3-202ENST00000392351 INTS5Q6P9B9 1019 aaKnown RBP32.84■■■□□ 2.85
HOMER3-202ENST00000392351 TSPYL6Q8N831 410 aa32.84■■■□□ 2.85
HOMER3-202ENST00000392351 EIF2S2P20042 333 aaKnown RBP32.83■■■□□ 2.85
HOMER3-202ENST00000392351 ZBTB1Q9Y2K1 713 aa32.83■■■□□ 2.85
HOMER3-202ENST00000392351 A1BGP04217 495 aa32.83■■■□□ 2.85
HOMER3-202ENST00000392351 TRMT2AQ8IZ69 625 aaKnown RBP32.82■■■□□ 2.84
HOMER3-202ENST00000392351 TWISTNBQ3B726 338 aaPredicted RBP32.81■■■□□ 2.84
HOMER3-202ENST00000392351 NECTIN2Q92692 538 aa32.81■■■□□ 2.84
HOMER3-202ENST00000392351 CANXP27824 592 aaKnown RBP32.8■■■□□ 2.84
HOMER3-202ENST00000392351 AMIGO3Q86WK7 504 aa32.8■■■□□ 2.84
HOMER3-202ENST00000392351 PIP4K2AP48426 406 aaPredicted RBP32.79■■■□□ 2.84
HOMER3-202ENST00000392351 R3HDM1Q15032 1099 aaKnown RBP32.79■■■□□ 2.84
HOMER3-202ENST00000392351 HDGFL1Q5TGJ6 251 aa32.79■■■□□ 2.84
HOMER3-202ENST00000392351 RTCBQ9Y3I0 505 aaKnown RBP32.79■■■□□ 2.84
HOMER3-202ENST00000392351 SOS1Q07889 1333 aaPredicted RBP32.79■■■□□ 2.84
HOMER3-202ENST00000392351 RPS6KA4O75676 772 aa32.79■■■□□ 2.84
HOMER3-202ENST00000392351 PHF14O94880 888 aa32.78■■■□□ 2.84
HOMER3-202ENST00000392351 SMIM5Q71RC9 77 aa32.78■■■□□ 2.84
HOMER3-202ENST00000392351 PSDA5PKW4 1024 aaPredicted RBP32.76■■■□□ 2.84
HOMER3-202ENST00000392351 C4AP0C0L4 1744 aa32.76■■■□□ 2.83
HOMER3-202ENST00000392351 PNPLA7Q6ZV29 1317 aa32.76■■■□□ 2.83
HOMER3-202ENST00000392351 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.75■■■□□ 2.83
HOMER3-202ENST00000392351 SSFA2P28290 1259 aa32.75■■■□□ 2.83
HOMER3-202ENST00000392351 NBPF26B4DH59 902 aa32.75■■■□□ 2.83
HOMER3-202ENST00000392351 NBPF10Q6P3W6 841 aaKnown RBP32.75■■■□□ 2.83
HOMER3-202ENST00000392351 NBPF15Q8N660 670 aa32.75■■■□□ 2.83
HOMER3-202ENST00000392351 ZNF330Q9Y3S2 320 aaPredicted RBP32.75■■■□□ 2.83
HOMER3-202ENST00000392351 ERBB4Q15303 1308 aa32.74■■■□□ 2.83
HOMER3-202ENST00000392351 COL15A1P39059 1388 aa32.73■■■□□ 2.83
HOMER3-202ENST00000392351 VAMP4O75379 141 aa32.72■■■□□ 2.83
HOMER3-202ENST00000392351 IL6STP40189 918 aaPredicted RBP32.72■■■□□ 2.83
HOMER3-202ENST00000392351 MYL6BP14649 208 aa32.71■■■□□ 2.83
HOMER3-202ENST00000392351 EIF5P55010 431 aaKnown RBP32.71■■■□□ 2.83
HOMER3-202ENST00000392351 TRAPPC3LQ5T215 181 aa32.71■■■□□ 2.83
HOMER3-202ENST00000392351 FLAD1Q8NFF5 587 aa32.71■■■□□ 2.83
HOMER3-202ENST00000392351 CHPF2Q9P2E5 772 aa32.71■■■□□ 2.83
HOMER3-202ENST00000392351 CASZ1Q86V15 1759 aa32.71■■■□□ 2.83
HOMER3-202ENST00000392351 ADRA2BP18089 450 aa32.7■■■□□ 2.83
HOMER3-202ENST00000392351 CCDC30Q5VVM6 783 aa32.7■■■□□ 2.83
HOMER3-202ENST00000392351 COL23A1Q86Y22 540 aaPredicted RBP32.7■■■□□ 2.83
HOMER3-202ENST00000392351 CHMP4AQ9BY43 222 aa32.7■■■□□ 2.83
HOMER3-202ENST00000392351 MSH5O43196 834 aa32.7■■■□□ 2.82
HOMER3-202ENST00000392351 PDIA6Q15084 440 aa32.7■■■□□ 2.82
HOMER3-202ENST00000392351 NPM2Q86SE8 214 aaKnown RBP32.7■■■□□ 2.82
HOMER3-202ENST00000392351 ANXA1P04083 346 aa32.69■■■□□ 2.82
HOMER3-202ENST00000392351 PROSER3Q2NL68 480 aa32.69■■■□□ 2.82
HOMER3-202ENST00000392351 ARHGEF1Q92888 912 aaKnown RBP32.69■■■□□ 2.82
HOMER3-202ENST00000392351 PDGFDQ9GZP0 370 aaPredicted RBP32.69■■■□□ 2.82
HOMER3-202ENST00000392351 DBF4Q9UBU7 674 aaPredicted RBP32.69■■■□□ 2.82
HOMER3-202ENST00000392351 DDX21Q9NR30 783 aaKnown RBP eCLIP32.68■■■□□ 2.82
HOMER3-202ENST00000392351 CACNA1FO60840 1977 aa32.68■■■□□ 2.82
HOMER3-202ENST00000392351 TCERG1O14776 1098 aaKnown RBP32.66■■■□□ 2.82
HOMER3-202ENST00000392351 RFC4P35249 363 aa32.66■■■□□ 2.82
HOMER3-202ENST00000392351 STK31Q9BXU1 1019 aa32.65■■■□□ 2.82
HOMER3-202ENST00000392351 LRP10Q7Z4F1 713 aa32.64■■■□□ 2.82
HOMER3-202ENST00000392351 ARXQ96QS3 562 aa32.64■■■□□ 2.82
HOMER3-202ENST00000392351 A0A087WZG4 1122 aa32.63■■■□□ 2.81
HOMER3-202ENST00000392351 SCN7AQ01118 1682 aa32.62■■■□□ 2.81
HOMER3-202ENST00000392351 BCORQ6W2J9 1755 aa32.62■■■□□ 2.81
HOMER3-202ENST00000392351 HYPKQ9NX55 129 aa32.62■■■□□ 2.81
HOMER3-202ENST00000392351 TBC1D2BQ9UPU7 963 aa32.62■■■□□ 2.81
HOMER3-202ENST00000392351 CT47B1P0C2W7 299 aaPredicted RBP32.61■■■□□ 2.81
HOMER3-202ENST00000392351 DZIP3Q86Y13 1208 aaKnown RBP32.61■■■□□ 2.81
HOMER3-202ENST00000392351 USP42Q9H9J4 1324 aaKnown RBP32.6■■■□□ 2.81
HOMER3-202ENST00000392351 SRP68Q9UHB9 627 aaKnown RBP32.6■■■□□ 2.81
HOMER3-202ENST00000392351 ZPR1O75312 459 aa32.59■■■□□ 2.81
HOMER3-202ENST00000392351 NARFQ9UHQ1 456 aa32.59■■■□□ 2.81
HOMER3-202ENST00000392351 SLC4A2P04920 1241 aa32.58■■■□□ 2.81
HOMER3-202ENST00000392351 ZNF428Q96B54 188 aa32.58■■■□□ 2.81
HOMER3-202ENST00000392351 AIMP1Q12904 312 aaKnown RBP32.58■■■□□ 2.81
HOMER3-202ENST00000392351 XAGE3Q8WTP9 111 aa32.58■■■□□ 2.81
HOMER3-202ENST00000392351 USPL1Q5W0Q7 1092 aa32.57■■■□□ 2.8
HOMER3-202ENST00000392351 TTLL7Q6ZT98 887 aa32.57■■■□□ 2.8
HOMER3-202ENST00000392351 COPS6Q7L5N1 327 aa32.57■■■□□ 2.8
HOMER3-202ENST00000392351 PHAXQ9H814 394 aaKnown RBP32.57■■■□□ 2.8
HOMER3-202ENST00000392351 SLC16A10Q8TF71 515 aa32.56■■■□□ 2.8
HOMER3-202ENST00000392351 ZBTB7AO95365 584 aa32.55■■■□□ 2.8
HOMER3-202ENST00000392351 KIF6Q6ZMV9 814 aa32.55■■■□□ 2.8
HOMER3-202ENST00000392351 CAMTA2O94983 1202 aa32.54■■■□□ 2.8
HOMER3-202ENST00000392351 NUP98P52948 1817 aa32.54■■■□□ 2.8
HOMER3-202ENST00000392351 GYS1P13807 737 aa32.53■■■□□ 2.8
HOMER3-202ENST00000392351 MSL1Q68DK7 614 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms