RNA–Protein interactions for RNA: ENST00000390368.2

TRBV6-5-201, Transcript of T cell receptor beta variable 6-5, humanhuman

APPRIS P1 BASIC

Gene TRBV6-5, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5-201ENST00000390368 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
TRBV6-5-201ENST00000390368 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
TRBV6-5-201ENST00000390368 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
TRBV6-5-201ENST00000390368 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
TRBV6-5-201ENST00000390368 ANP32CO43423 234 aa13.17□□□□□ -0.3
TRBV6-5-201ENST00000390368 GYS1P13807 737 aa13.17□□□□□ -0.3
TRBV6-5-201ENST00000390368 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
TRBV6-5-201ENST00000390368 SCN7AQ01118 1682 aa13.17□□□□□ -0.3
TRBV6-5-201ENST00000390368 COL15A1P39059 1388 aa13.17□□□□□ -0.3
TRBV6-5-201ENST00000390368 BCORQ6W2J9 1755 aa13.17□□□□□ -0.3
TRBV6-5-201ENST00000390368 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
TRBV6-5-201ENST00000390368 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
TRBV6-5-201ENST00000390368 RFC4P35249 363 aa13.16□□□□□ -0.3
TRBV6-5-201ENST00000390368 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
TRBV6-5-201ENST00000390368 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
TRBV6-5-201ENST00000390368 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
TRBV6-5-201ENST00000390368 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
TRBV6-5-201ENST00000390368 STARD3NLO95772 234 aa13.15□□□□□ -0.3
TRBV6-5-201ENST00000390368 CANXP27824 592 aaKnown RBP13.15□□□□□ -0.3
TRBV6-5-201ENST00000390368 PNISRQ8TF01 805 aaKnown RBP13.15□□□□□ -0.3
TRBV6-5-201ENST00000390368 AFDNP55196 1824 aaKnown RBP13.15□□□□□ -0.3
TRBV6-5-201ENST00000390368 A1BGP04217 495 aa13.14□□□□□ -0.31
TRBV6-5-201ENST00000390368 MMP10P09238 476 aa13.14□□□□□ -0.31
TRBV6-5-201ENST00000390368 SNRPA1P09661 255 aaKnown RBP13.14□□□□□ -0.31
TRBV6-5-201ENST00000390368 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
TRBV6-5-201ENST00000390368 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
TRBV6-5-201ENST00000390368 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
TRBV6-5-201ENST00000390368 NLGN2Q8NFZ4 835 aa13.14□□□□□ -0.31
TRBV6-5-201ENST00000390368 NRXN2Q9P2S2 1712 aa13.13□□□□□ -0.31
TRBV6-5-201ENST00000390368 N4BP2Q86UW6 1770 aaPredicted RBP13.13□□□□□ -0.31
TRBV6-5-201ENST00000390368 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
TRBV6-5-201ENST00000390368 FKBP8Q14318 412 aa13.13□□□□□ -0.31
TRBV6-5-201ENST00000390368 USPL1Q5W0Q7 1092 aa13.13□□□□□ -0.31
TRBV6-5-201ENST00000390368 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
TRBV6-5-201ENST00000390368 APAF1O14727 1248 aa13.12□□□□□ -0.31
TRBV6-5-201ENST00000390368 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
TRBV6-5-201ENST00000390368 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
TRBV6-5-201ENST00000390368 BCL2L12Q9HB09 334 aa13.12□□□□□ -0.31
TRBV6-5-201ENST00000390368 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
TRBV6-5-201ENST00000390368 NARFQ9UHQ1 456 aa13.12□□□□□ -0.31
TRBV6-5-201ENST00000390368 BRCA1P38398 1863 aaKnown RBP13.11□□□□□ -0.31
TRBV6-5-201ENST00000390368 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
TRBV6-5-201ENST00000390368 TM4SF1P30408 202 aa13.11□□□□□ -0.31
TRBV6-5-201ENST00000390368 IL6STP40189 918 aaPredicted RBP13.11□□□□□ -0.31
TRBV6-5-201ENST00000390368 NBPF10Q6P3W6 841 aaKnown RBP13.11□□□□□ -0.31
TRBV6-5-201ENST00000390368 NBPF15Q8N660 670 aa13.11□□□□□ -0.31
TRBV6-5-201ENST00000390368 BABAM1Q9NWV8 329 aa13.11□□□□□ -0.31
TRBV6-5-201ENST00000390368 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
TRBV6-5-201ENST00000390368 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
TRBV6-5-201ENST00000390368 ZPR1O75312 459 aa13.1□□□□□ -0.31
TRBV6-5-201ENST00000390368 DDR1Q08345 913 aa13.1□□□□□ -0.31
TRBV6-5-201ENST00000390368 C10orf71Q711Q0 1435 aa13.1□□□□□ -0.31
TRBV6-5-201ENST00000390368 POLRMTO00411 1230 aaKnown RBP13.09□□□□□ -0.31
TRBV6-5-201ENST00000390368 CHL1O00533 1208 aa13.09□□□□□ -0.31
TRBV6-5-201ENST00000390368 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
TRBV6-5-201ENST00000390368 ZNF330Q9Y3S2 320 aaPredicted RBP13.09□□□□□ -0.31
TRBV6-5-201ENST00000390368 NUP98P52948 1817 aa13.09□□□□□ -0.31
TRBV6-5-201ENST00000390368 CHD4Q14839 1912 aa13.08□□□□□ -0.32
TRBV6-5-201ENST00000390368 A0A087WZG4 1122 aa13.08□□□□□ -0.32
TRBV6-5-201ENST00000390368 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
TRBV6-5-201ENST00000390368 NFIXQ14938 502 aa13.08□□□□□ -0.32
TRBV6-5-201ENST00000390368 PARP3Q9Y6F1 533 aa13.08□□□□□ -0.32
TRBV6-5-201ENST00000390368 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
TRBV6-5-201ENST00000390368 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
TRBV6-5-201ENST00000390368 ZNF853P0CG23 659 aa13.07□□□□□ -0.32
TRBV6-5-201ENST00000390368 KRT24Q2M2I5 525 aa13.07□□□□□ -0.32
TRBV6-5-201ENST00000390368 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
TRBV6-5-201ENST00000390368 PXDNLA1KZ92 1463 aa13.07□□□□□ -0.32
TRBV6-5-201ENST00000390368 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
TRBV6-5-201ENST00000390368 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
TRBV6-5-201ENST00000390368 DZIP3Q86Y13 1208 aaKnown RBP13.06□□□□□ -0.32
TRBV6-5-201ENST00000390368 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
TRBV6-5-201ENST00000390368 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRBV6-5-201ENST00000390368 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
TRBV6-5-201ENST00000390368 PDIA6Q15084 440 aa13.04□□□□□ -0.32
TRBV6-5-201ENST00000390368 GPR162Q16538 588 aa13.04□□□□□ -0.32
TRBV6-5-201ENST00000390368 LRP10Q7Z4F1 713 aa13.04□□□□□ -0.32
TRBV6-5-201ENST00000390368 ARFGEF1Q9Y6D6 1849 aa13.04□□□□□ -0.32
TRBV6-5-201ENST00000390368 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
TRBV6-5-201ENST00000390368 SERPINB2P05120 415 aa13.03□□□□□ -0.32
TRBV6-5-201ENST00000390368 MYL6BP14649 208 aa13.03□□□□□ -0.32
TRBV6-5-201ENST00000390368 TGFB2P61812 414 aa13.03□□□□□ -0.32
TRBV6-5-201ENST00000390368 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
TRBV6-5-201ENST00000390368 BICDL1Q6ZP65 573 aa13.03□□□□□ -0.32
TRBV6-5-201ENST00000390368 IFT57Q9NWB7 429 aa13.03□□□□□ -0.32
TRBV6-5-201ENST00000390368 ERBB4Q15303 1308 aa13.03□□□□□ -0.32
TRBV6-5-201ENST00000390368 CARMIL3Q8ND23 1372 aa13.03□□□□□ -0.32
TRBV6-5-201ENST00000390368 COL11A2P13942 1736 aaPredicted RBP13.02□□□□□ -0.32
TRBV6-5-201ENST00000390368 ANKRD36CQ5JPF3 1778 aa13.02□□□□□ -0.32
TRBV6-5-201ENST00000390368 A0A0G2JLW4 131 aa13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 KCNA3P22001 575 aa13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 HLFQ16534 295 aa13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 PROSER3Q2NL68 480 aa13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 FAM9BQ8IZU0 186 aa13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 NGEFQ8N5V2 710 aa13.02□□□□□ -0.33
TRBV6-5-201ENST00000390368 WWC3Q9ULE0 1092 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms