RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 CACNA2D4Q7Z3S7 1137 aa14.52□□□□□ -0.09
FANCA-202ENST00000389301 SSR1P43307 286 aaKnown RBP14.52□□□□□ -0.09
FANCA-202ENST00000389301 ZSWIM4Q9H7M6 989 aa14.52□□□□□ -0.09
FANCA-202ENST00000389301 ATF3P18847 181 aa14.52□□□□□ -0.09
FANCA-202ENST00000389301 AIDAQ96BJ3 306 aa14.51□□□□□ -0.09
FANCA-202ENST00000389301 USO1O60763 962 aaKnown RBP14.51□□□□□ -0.09
FANCA-202ENST00000389301 MCM10Q7L590 875 aa14.51□□□□□ -0.09
FANCA-202ENST00000389301 CCDC171Q6TFL3 1326 aa14.51□□□□□ -0.09
FANCA-202ENST00000389301 GOLGA6L9A6NEM1 432 aa14.51□□□□□ -0.09
FANCA-202ENST00000389301 ESCO1Q5FWF5 840 aa14.51□□□□□ -0.09
FANCA-202ENST00000389301 CCDC91Q7Z6B0 441 aa14.51□□□□□ -0.09
FANCA-202ENST00000389301 CCDC150Q8NCX0 1101 aa14.51□□□□□ -0.09
FANCA-202ENST00000389301 MPHOSPH8Q99549 860 aa14.51□□□□□ -0.09
FANCA-202ENST00000389301 TIAM1Q13009 1591 aa14.51□□□□□ -0.09
FANCA-202ENST00000389301 GNG11P61952 73 aa14.5□□□□□ -0.09
FANCA-202ENST00000389301 CCDC12Q8WUD4 166 aaPredicted RBP14.5□□□□□ -0.09
FANCA-202ENST00000389301 RBM25P49756 843 aaKnown RBP14.5□□□□□ -0.09
FANCA-202ENST00000389301 SPG7Q9UQ90 795 aa14.5□□□□□ -0.09
FANCA-202ENST00000389301 LIG1P18858 919 aa14.5□□□□□ -0.09
FANCA-202ENST00000389301 SMC1AQ14683 1233 aaKnown RBP14.49□□□□□ -0.09
FANCA-202ENST00000389301 PAF1Q8N7H5 531 aa14.49□□□□□ -0.09
FANCA-202ENST00000389301 ZKSCAN5Q9Y2L8 839 aa14.49□□□□□ -0.09
FANCA-202ENST00000389301 HMGB1P09429 215 aaKnown RBP14.49□□□□□ -0.09
FANCA-202ENST00000389301 MNAT1P51948 309 aa14.49□□□□□ -0.09
FANCA-202ENST00000389301 CCT2P78371 535 aaKnown RBP14.49□□□□□ -0.09
FANCA-202ENST00000389301 DAPK1P53355 1430 aa14.49□□□□□ -0.09
FANCA-202ENST00000389301 RTEL1-TNFRSF6BF6WH68 1400 aa14.49□□□□□ -0.09
FANCA-202ENST00000389301 ABCC11Q96J66 1382 aa14.49□□□□□ -0.09
FANCA-202ENST00000389301 CCDC175P0C221 793 aa14.49□□□□□ -0.09
FANCA-202ENST00000389301 HLTFQ14527 1009 aaKnown RBP eCLIP14.48□□□□□ -0.093e-6■■□□□ 13
FANCA-202ENST00000389301 WWC2Q6AWC2 1192 aa14.48□□□□□ -0.09
FANCA-202ENST00000389301 CCDC85AQ96PX6 553 aaPredicted RBP14.48□□□□□ -0.09
FANCA-202ENST00000389301 DHX29Q7Z478 1369 aaKnown RBP14.48□□□□□ -0.09
FANCA-202ENST00000389301 F6X3S4 739 aa14.48□□□□□ -0.09
FANCA-202ENST00000389301 GTF2A1P52655 376 aaPredicted RBP14.48□□□□□ -0.09
FANCA-202ENST00000389301 ISM2Q6H9L7 571 aa14.48□□□□□ -0.09
FANCA-202ENST00000389301 DNAAF4Q8WXU2 420 aa14.48□□□□□ -0.09
FANCA-202ENST00000389301 GCOM1H8Y6P7 765 aaPredicted RBP14.48□□□□□ -0.09
FANCA-202ENST00000389301 MYZAPP0CAP1 466 aa14.48□□□□□ -0.09
FANCA-202ENST00000389301 SPECC1Q5M775 1068 aa14.48□□□□□ -0.09
FANCA-202ENST00000389301 LRP2BPQ9P2M1 347 aa14.48□□□□□ -0.09
FANCA-202ENST00000389301 ATAD2Q6PL18 1390 aa14.48□□□□□ -0.09
FANCA-202ENST00000389301 TDRD12Q587J7 1177 aaKnown RBP14.48□□□□□ -0.09
FANCA-202ENST00000389301 TSG101Q99816 390 aa14.48□□□□□ -0.09
FANCA-202ENST00000389301 CCDC8Q9H0W5 538 aaPredicted RBP14.48□□□□□ -0.09
FANCA-202ENST00000389301 GNAT3A8MTJ3 354 aa14.47□□□□□ -0.09
FANCA-202ENST00000389301 TTC22Q5TAA0 569 aa14.47□□□□□ -0.09
FANCA-202ENST00000389301 CCDC186Q7Z3E2 898 aa14.47□□□□□ -0.09
FANCA-202ENST00000389301 MAATS1Q7Z4T9 603 aa14.47□□□□□ -0.09
FANCA-202ENST00000389301 TMX3Q96JJ7 454 aa14.47□□□□□ -0.09
FANCA-202ENST00000389301 ALS2CR12Q96Q35 445 aa14.47□□□□□ -0.09
FANCA-202ENST00000389301 CCDC94Q9BW85 323 aaPredicted RBP14.47□□□□□ -0.09
FANCA-202ENST00000389301 BBXQ8WY36 941 aaPredicted RBP14.47□□□□□ -0.09
FANCA-202ENST00000389301 NAA15Q9BXJ9 866 aaKnown RBP14.47□□□□□ -0.09
FANCA-202ENST00000389301 GSTTP1A0A1W2PQM5 241 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 GOLGA8BA8MQT2 603 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 CAVIN2O95810 425 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 SKILP12757 684 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 USP5P45974 858 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 ZSCAN22P10073 491 aaPredicted RBP14.46□□□□□ -0.09
FANCA-202ENST00000389301 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.46□□□□□ -0.098e-8■□□□□ 9.7
FANCA-202ENST00000389301 PHAXQ9H814 394 aaKnown RBP14.46□□□□□ -0.09
FANCA-202ENST00000389301 PPP1R12BO60237 982 aaPredicted RBP14.46□□□□□ -0.09
FANCA-202ENST00000389301 ANO6Q4KMQ2 910 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 VPS36Q86VN1 386 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 CCDC82Q8N4S0 544 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 RSPH14Q9UHP6 348 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 CNPY2Q9Y2B0 182 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 NAIPQ13075 1403 aa14.46□□□□□ -0.09
FANCA-202ENST00000389301 GTPBP4Q9BZE4 634 aaKnown RBP14.46□□□□□ -0.1
FANCA-202ENST00000389301 UBE4AQ14139 1066 aa14.45□□□□□ -0.1
FANCA-202ENST00000389301 TTC12Q9H892 705 aaPredicted RBP14.45□□□□□ -0.1
FANCA-202ENST00000389301 ZNF76P36508 570 aa14.45□□□□□ -0.1
FANCA-202ENST00000389301 MATR3P43243 847 aaKnown RBP eCLIP14.45□□□□□ -0.1
FANCA-202ENST00000389301 IFIT1P09914 478 aaKnown RBP14.45□□□□□ -0.1
FANCA-202ENST00000389301 CETN2P41208 172 aa14.45□□□□□ -0.1
FANCA-202ENST00000389301 USP48Q86UV5 1035 aa14.45□□□□□ -0.1
FANCA-202ENST00000389301 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.45□□□□□ -0.17e-7■■■□□ 14.8
FANCA-202ENST00000389301 DNAI1Q9UI46 699 aa14.45□□□□□ -0.1
FANCA-202ENST00000389301 V9GYY5 206 aaPredicted RBP14.45□□□□□ -0.1
FANCA-202ENST00000389301 NCOA1Q15788 1441 aa14.45□□□□□ -0.1
FANCA-202ENST00000389301 TSHZ3Q63HK5 1081 aa14.45□□□□□ -0.1
FANCA-202ENST00000389301 ARFGAP3Q9NP61 516 aa14.45□□□□□ -0.1
FANCA-202ENST00000389301 JADE2Q9NQC1 790 aa14.45□□□□□ -0.1
FANCA-202ENST00000389301 CCDC196A0A1B0GTZ2 297 aa14.44□□□□□ -0.1
FANCA-202ENST00000389301 IVLP07476 585 aa14.44□□□□□ -0.1
FANCA-202ENST00000389301 SSRP1Q08945 709 aaKnown RBP14.44□□□□□ -0.1
FANCA-202ENST00000389301 C8orf34Q49A92 452 aa14.44□□□□□ -0.1
FANCA-202ENST00000389301 PRIM1P49642 420 aaKnown RBP14.44□□□□□ -0.1
FANCA-202ENST00000389301 SLC12A7Q9Y666 1083 aa14.44□□□□□ -0.1
FANCA-202ENST00000389301 EFCAB5A4FU69 1503 aa14.44□□□□□ -0.1
FANCA-202ENST00000389301 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
FANCA-202ENST00000389301 MTIF2P46199 727 aaKnown RBP14.44□□□□□ -0.1
FANCA-202ENST00000389301 GOLGA8AA7E2F4 631 aa14.43□□□□□ -0.1
FANCA-202ENST00000389301 MINDY4BA8MYZ0 360 aa14.43□□□□□ -0.1
FANCA-202ENST00000389301 ATP2C2O75185 946 aa14.43□□□□□ -0.1
FANCA-202ENST00000389301 FGFR1OPO95684 399 aaKnown RBP14.43□□□□□ -0.1
FANCA-202ENST00000389301 POLR3DP05423 398 aaPredicted RBP14.43□□□□□ -0.1
FANCA-202ENST00000389301 METTL24Q5JXM2 366 aa14.43□□□□□ -0.1
FANCA-202ENST00000389301 GIGYF2Q6Y7W6 1299 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms