RNA–Protein interactions for RNA: ENST00000388782.8

GKAP1-204, Transcript of G kinase anchoring protein 1, human

TSL 2

Gene GKAP1, Length 1,231 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GKAP1-204	ENST00000388782	CHMP4A	Q9BY43	222 aa		31.98	■■■□□ 2.71
GKAP1-204	ENST00000388782	CNTNAP4	Q9C0A0	1308 aa		31.97	■■■□□ 2.71
GKAP1-204	ENST00000388782	PRAMEF22	A3QJZ6	481 aa		31.96	■■■□□ 2.71
GKAP1-204	ENST00000388782	PSD	A5PKW4	1024 aa	Predicted RBP	31.96	■■■□□ 2.71
GKAP1-204	ENST00000388782	CYP19A1	P11511	503 aa	Predicted RBP	31.96	■■■□□ 2.71
GKAP1-204	ENST00000388782	TWISTNB	Q3B726	338 aa	Predicted RBP	31.96	■■■□□ 2.71
GKAP1-204	ENST00000388782	USP16	Q9Y5T5	823 aa		31.95	■■■□□ 2.71
GKAP1-204	ENST00000388782	ELL2	O00472	640 aa	Predicted RBP	31.94	■■■□□ 2.7
GKAP1-204	ENST00000388782	TSPYL6	Q8N831	410 aa		31.94	■■■□□ 2.7
GKAP1-204	ENST00000388782	RC3H1	Q5TC82	1133 aa	Known RBP	31.93	■■■□□ 2.7
GKAP1-204	ENST00000388782	LRP5	O75197	1615 aa		31.93	■■■□□ 2.7
GKAP1-204	ENST00000388782	CRKL	P46109	303 aa	Known RBP	31.92	■■■□□ 2.7
GKAP1-204	ENST00000388782	HDGFL1	Q5TGJ6	251 aa		31.92	■■■□□ 2.7
GKAP1-204	ENST00000388782	CCDC87	Q9NVE4	849 aa		31.92	■■■□□ 2.7
GKAP1-204	ENST00000388782	ERBB4	Q15303	1308 aa		31.92	■■■□□ 2.7
GKAP1-204	ENST00000388782	CT47B1	P0C2W7	299 aa	Predicted RBP	31.91	■■■□□ 2.7
GKAP1-204	ENST00000388782	AK7	Q96M32	723 aa		31.91	■■■□□ 2.7
GKAP1-204	ENST00000388782	EIF2S2	P20042	333 aa	Known RBP	31.9	■■■□□ 2.7
GKAP1-204	ENST00000388782	VAMP4	O75379	141 aa		31.88	■■■□□ 2.69
GKAP1-204	ENST00000388782	CCDC30	Q5VVM6	783 aa		31.88	■■■□□ 2.69
GKAP1-204	ENST00000388782	NBPF14	Q5TI25	921 aa		31.87	■■■□□ 2.69
GKAP1-204	ENST00000388782	INTS5	Q6P9B9	1019 aa	Known RBP	31.87	■■■□□ 2.69
GKAP1-204	ENST00000388782	AKT1S1	Q96B36	256 aa		31.87	■■■□□ 2.69
GKAP1-204	ENST00000388782	ZNF428	Q96B54	188 aa		31.87	■■■□□ 2.69
GKAP1-204	ENST00000388782	STK32B	Q9NY57	414 aa		31.87	■■■□□ 2.69
GKAP1-204	ENST00000388782	ZBTB1	Q9Y2K1	713 aa		31.86	■■■□□ 2.69
GKAP1-204	ENST00000388782	MYH14	Q7Z406	1995 aa	Known RBP	31.86	■■■□□ 2.69
GKAP1-204	ENST00000388782	GNPAT	O15228	680 aa		31.85	■■■□□ 2.69
GKAP1-204	ENST00000388782	A1BG	P04217	495 aa		31.85	■■■□□ 2.69
GKAP1-204	ENST00000388782	R3HDM1	Q15032	1099 aa	Known RBP	31.85	■■■□□ 2.69
GKAP1-204	ENST00000388782	ZNF827	Q17R98	1081 aa		31.84	■■■□□ 2.69
GKAP1-204	ENST00000388782	NECTIN2	Q92692	538 aa		31.84	■■■□□ 2.69
GKAP1-204	ENST00000388782	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.84	■■■□□ 2.69
GKAP1-204	ENST00000388782	UBR3	Q6ZT12	1888 aa		31.83	■■■□□ 2.69
GKAP1-204	ENST00000388782	DBF4	Q9UBU7	674 aa	Predicted RBP	31.83	■■■□□ 2.69
GKAP1-204	ENST00000388782	RTCB	Q9Y3I0	505 aa	Known RBP	31.83	■■■□□ 2.69
GKAP1-204	ENST00000388782	RPS6KA4	O75676	772 aa		31.82	■■■□□ 2.68
GKAP1-204	ENST00000388782	CANX	P27824	592 aa	Known RBP	31.82	■■■□□ 2.68
GKAP1-204	ENST00000388782	IL6ST	P40189	918 aa	Predicted RBP	31.82	■■■□□ 2.68
GKAP1-204	ENST00000388782	SLC15A2	Q16348	729 aa		31.82	■■■□□ 2.68
GKAP1-204	ENST00000388782	STK31	Q9BXU1	1019 aa		31.82	■■■□□ 2.68
GKAP1-204	ENST00000388782	QSER1	Q2KHR3	1735 aa		31.81	■■■□□ 2.68
GKAP1-204	ENST00000388782	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.81	■■■□□ 2.68
GKAP1-204	ENST00000388782	TFCP2L1	Q9NZI6	479 aa		31.81	■■■□□ 2.68
GKAP1-204	ENST00000388782	CHPF2	Q9P2E5	772 aa		31.81	■■■□□ 2.68
GKAP1-204	ENST00000388782	SSFA2	P28290	1259 aa		31.8	■■■□□ 2.68
GKAP1-204	ENST00000388782	NBPF26	B4DH59	902 aa		31.79	■■■□□ 2.68
GKAP1-204	ENST00000388782	ADRA2B	P18089	450 aa		31.79	■■■□□ 2.68
GKAP1-204	ENST00000388782	NBPF10	Q6P3W6	841 aa	Known RBP	31.79	■■■□□ 2.68
GKAP1-204	ENST00000388782	NPM2	Q86SE8	214 aa	Known RBP	31.79	■■■□□ 2.68
GKAP1-204	ENST00000388782	NBPF15	Q8N660	670 aa		31.79	■■■□□ 2.68
GKAP1-204	ENST00000388782	TUBGCP6	Q96RT7	1819 aa		31.79	■■■□□ 2.68
GKAP1-204	ENST00000388782	PDIA6	Q15084	440 aa		31.78	■■■□□ 2.68
GKAP1-204	ENST00000388782	FLAD1	Q8NFF5	587 aa		31.78	■■■□□ 2.68
GKAP1-204	ENST00000388782	COL15A1	P39059	1388 aa		31.78	■■■□□ 2.68
GKAP1-204	ENST00000388782	EIF5	P55010	431 aa	Known RBP	31.77	■■■□□ 2.68
GKAP1-204	ENST00000388782	HYPK	Q9NX55	129 aa		31.77	■■■□□ 2.68
GKAP1-204	ENST00000388782	MYL6B	P14649	208 aa		31.76	■■■□□ 2.67
GKAP1-204	ENST00000388782	PIP4K2A	P48426	406 aa	Predicted RBP	31.76	■■■□□ 2.67
GKAP1-204	ENST00000388782	ALDH1L2	Q3SY69	923 aa		31.76	■■■□□ 2.67
GKAP1-204	ENST00000388782		A0A087WZG4	1122 aa		31.75	■■■□□ 2.67
GKAP1-204	ENST00000388782	ZNF330	Q9Y3S2	320 aa	Predicted RBP	31.75	■■■□□ 2.67
GKAP1-204	ENST00000388782	CACNA1F	O60840	1977 aa		31.75	■■■□□ 2.67
GKAP1-204	ENST00000388782	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	31.74	■■■□□ 2.67
GKAP1-204	ENST00000388782	PROSER3	Q2NL68	480 aa		31.74	■■■□□ 2.67
GKAP1-204	ENST00000388782	PHF14	O94880	888 aa		31.73	■■■□□ 2.67
GKAP1-204	ENST00000388782	TRAPPC3L	Q5T215	181 aa		31.73	■■■□□ 2.67
GKAP1-204	ENST00000388782	LRP10	Q7Z4F1	713 aa		31.73	■■■□□ 2.67
GKAP1-204	ENST00000388782	ANXA1	P04083	346 aa		31.72	■■■□□ 2.67
GKAP1-204	ENST00000388782	PNPLA7	Q6ZV29	1317 aa		31.72	■■■□□ 2.67
GKAP1-204	ENST00000388782	C4A	P0C0L4	1744 aa		31.72	■■■□□ 2.67
GKAP1-204	ENST00000388782	TCERG1	O14776	1098 aa	Known RBP	31.71	■■■□□ 2.67
GKAP1-204	ENST00000388782	SLC4A2	P04920	1241 aa		31.71	■■■□□ 2.67
GKAP1-204	ENST00000388782	AMIGO3	Q86WK7	504 aa		31.71	■■■□□ 2.67
GKAP1-204	ENST00000388782	RARS	P54136	660 aa	Known RBP	31.7	■■■□□ 2.67
GKAP1-204	ENST00000388782	SSH1	Q8WYL5	1049 aa		31.7	■■■□□ 2.67
GKAP1-204	ENST00000388782	SMC4	Q9NTJ3	1288 aa		31.7	■■■□□ 2.67
GKAP1-204	ENST00000388782	RFC4	P35249	363 aa		31.68	■■■□□ 2.66
GKAP1-204	ENST00000388782	ARHGEF1	Q92888	912 aa	Known RBP	31.68	■■■□□ 2.66
GKAP1-204	ENST00000388782	KIF6	Q6ZMV9	814 aa		31.67	■■■□□ 2.66
GKAP1-204	ENST00000388782	DZIP3	Q86Y13	1208 aa	Known RBP	31.67	■■■□□ 2.66
GKAP1-204	ENST00000388782	XAGE3	Q8WTP9	111 aa		31.67	■■■□□ 2.66
GKAP1-204	ENST00000388782	MRPL50	Q8N5N7	158 aa	Known RBP	31.66	■■■□□ 2.66
GKAP1-204	ENST00000388782	SCN7A	Q01118	1682 aa		31.66	■■■□□ 2.66
GKAP1-204	ENST00000388782	SMIM5	Q71RC9	77 aa		31.65	■■■□□ 2.66
GKAP1-204	ENST00000388782	COPS6	Q7L5N1	327 aa		31.65	■■■□□ 2.66
GKAP1-204	ENST00000388782	COL23A1	Q86Y22	540 aa	Predicted RBP	31.65	■■■□□ 2.66
GKAP1-204	ENST00000388782	ARX	Q96QS3	562 aa		31.65	■■■□□ 2.66
GKAP1-204	ENST00000388782	BCL2L13	Q9BXK5	485 aa		31.65	■■■□□ 2.66
GKAP1-204	ENST00000388782	BCOR	Q6W2J9	1755 aa		31.65	■■■□□ 2.66
GKAP1-204	ENST00000388782	ZPR1	O75312	459 aa		31.64	■■■□□ 2.66
GKAP1-204	ENST00000388782	BRPF1	P55201	1214 aa	Predicted RBP	31.64	■■■□□ 2.66
GKAP1-204	ENST00000388782	FLII	Q13045	1269 aa		31.64	■■■□□ 2.66
GKAP1-204	ENST00000388782	PHAX	Q9H814	394 aa	Known RBP	31.64	■■■□□ 2.66
GKAP1-204	ENST00000388782	NARF	Q9UHQ1	456 aa		31.64	■■■□□ 2.66
GKAP1-204	ENST00000388782	USP42	Q9H9J4	1324 aa	Known RBP	31.64	■■■□□ 2.66
GKAP1-204	ENST00000388782	MSH5	O43196	834 aa		31.63	■■■□□ 2.65
GKAP1-204	ENST00000388782	DDX58	O95786	925 aa	Known RBP	31.63	■■■□□ 2.65
GKAP1-204	ENST00000388782	AIMP1	Q12904	312 aa	Known RBP	31.63	■■■□□ 2.65
GKAP1-204	ENST00000388782	RCAN3	Q9UKA8	241 aa		31.63	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms