RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 GNPATO15228 680 aa22.88■■□□□ 1.25
CD9-202ENST00000382515 PAPPAQ13219 1627 aa22.87■■□□□ 1.25
CD9-202ENST00000382515 IL6STP40189 918 aaPredicted RBP22.87■■□□□ 1.25
CD9-202ENST00000382515 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
CD9-202ENST00000382515 A0A087WZG4 1122 aa22.86■■□□□ 1.25
CD9-202ENST00000382515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.85■■□□□ 1.25
CD9-202ENST00000382515 DUSP27Q5VZP5 1158 aa22.85■■□□□ 1.25
CD9-202ENST00000382515 PNPLA7Q6ZV29 1317 aa22.84■■□□□ 1.25
CD9-202ENST00000382515 EIF5P55010 431 aaKnown RBP22.84■■□□□ 1.25
CD9-202ENST00000382515 VIRMAQ69YN4 1812 aaKnown RBP22.83■■□□□ 1.25
CD9-202ENST00000382515 PRAMEF22A3QJZ6 481 aa22.83■■□□□ 1.25
CD9-202ENST00000382515 A1BGP04217 495 aa22.83■■□□□ 1.25
CD9-202ENST00000382515 RFC4P35249 363 aa22.83■■□□□ 1.25
CD9-202ENST00000382515 SLFN5Q08AF3 891 aa22.83■■□□□ 1.25
CD9-202ENST00000382515 ZBTB1Q9Y2K1 713 aa22.83■■□□□ 1.25
CD9-202ENST00000382515 CICQ96RK0 1608 aaPredicted RBP22.82■■□□□ 1.24
CD9-202ENST00000382515 NUP188Q5SRE5 1749 aa22.82■■□□□ 1.24
CD9-202ENST00000382515 UBR2Q8IWV8 1755 aa22.82■■□□□ 1.24
CD9-202ENST00000382515 PSDA5PKW4 1024 aaPredicted RBP22.82■■□□□ 1.24
CD9-202ENST00000382515 CANXP27824 592 aaKnown RBP22.82■■□□□ 1.24
CD9-202ENST00000382515 COL23A1Q86Y22 540 aaPredicted RBP22.82■■□□□ 1.24
CD9-202ENST00000382515 ARHGEF1Q92888 912 aaKnown RBP22.82■■□□□ 1.24
CD9-202ENST00000382515 TSR2Q969E8 191 aaKnown RBP22.82■■□□□ 1.24
CD9-202ENST00000382515 FANCIQ9NVI1 1328 aa22.82■■□□□ 1.24
CD9-202ENST00000382515 TRMT2AQ8IZ69 625 aaKnown RBP22.81■■□□□ 1.24
CD9-202ENST00000382515 C5P01031 1676 aa22.81■■□□□ 1.24
CD9-202ENST00000382515 RGL2O15211 777 aa22.8■■□□□ 1.24
CD9-202ENST00000382515 EIF2S2P20042 333 aaKnown RBP22.8■■□□□ 1.24
CD9-202ENST00000382515 HDGFL1Q5TGJ6 251 aa22.8■■□□□ 1.24
CD9-202ENST00000382515 C8orf58Q8NAV2 365 aa22.8■■□□□ 1.24
CD9-202ENST00000382515 SPINK5Q9NQ38 1064 aaPredicted RBP22.8■■□□□ 1.24
CD9-202ENST00000382515 DBF4Q9UBU7 674 aaPredicted RBP22.8■■□□□ 1.24
CD9-202ENST00000382515 ZBED9Q6R2W3 1325 aa22.8■■□□□ 1.24
CD9-202ENST00000382515 C4BP0C0L5 1744 aa22.79■■□□□ 1.24
CD9-202ENST00000382515 MSH5O43196 834 aa22.79■■□□□ 1.24
CD9-202ENST00000382515 TWISTNBQ3B726 338 aaPredicted RBP22.79■■□□□ 1.24
CD9-202ENST00000382515 CCDC30Q5VVM6 783 aa22.79■■□□□ 1.24
CD9-202ENST00000382515 MTFR1LQ9H019 292 aa22.79■■□□□ 1.24
CD9-202ENST00000382515 DDX21Q9NR30 783 aaKnown RBP eCLIP22.79■■□□□ 1.24
CD9-202ENST00000382515 ZPR1O75312 459 aa22.78■■□□□ 1.24
CD9-202ENST00000382515 PHF14O94880 888 aa22.78■■□□□ 1.24
CD9-202ENST00000382515 KRT24Q2M2I5 525 aa22.78■■□□□ 1.24
CD9-202ENST00000382515 NLGN1Q8N2Q7 840 aa22.78■■□□□ 1.24
CD9-202ENST00000382515 ZNF428Q96B54 188 aa22.78■■□□□ 1.24
CD9-202ENST00000382515 KDM3BQ7LBC6 1761 aa22.78■■□□□ 1.24
CD9-202ENST00000382515 NBPF26B4DH59 902 aa22.77■■□□□ 1.24
CD9-202ENST00000382515 ELL2O00472 640 aaPredicted RBP22.77■■□□□ 1.24
CD9-202ENST00000382515 CT47B1P0C2W7 299 aaPredicted RBP22.77■■□□□ 1.24
CD9-202ENST00000382515 NBPF10Q6P3W6 841 aaKnown RBP22.77■■□□□ 1.24
CD9-202ENST00000382515 NBPF15Q8N660 670 aa22.77■■□□□ 1.24
CD9-202ENST00000382515 NARFQ9UHQ1 456 aa22.77■■□□□ 1.24
CD9-202ENST00000382515 EXOSC9Q06265 439 aaKnown RBP22.76■■□□□ 1.23
CD9-202ENST00000382515 HYPKQ9NX55 129 aa22.76■■□□□ 1.23
CD9-202ENST00000382515 VAMP4O75379 141 aa22.75■■□□□ 1.23
CD9-202ENST00000382515 AMIGO3Q86WK7 504 aa22.75■■□□□ 1.23
CD9-202ENST00000382515 TSPYL6Q8N831 410 aa22.75■■□□□ 1.23
CD9-202ENST00000382515 SPON1Q9HCB6 807 aa22.75■■□□□ 1.23
CD9-202ENST00000382515 TAF1LQ8IZX4 1826 aa22.74■■□□□ 1.23
CD9-202ENST00000382515 PDIA6Q15084 440 aa22.74■■□□□ 1.23
CD9-202ENST00000382515 CLEC4GQ6UXB4 293 aa22.74■■□□□ 1.23
CD9-202ENST00000382515 COL15A1P39059 1388 aa22.74■■□□□ 1.23
CD9-202ENST00000382515 CDCA7LQ96GN5 454 aa22.73■■□□□ 1.23
CD9-202ENST00000382515 STK31Q9BXU1 1019 aa22.73■■□□□ 1.23
CD9-202ENST00000382515 USP42Q9H9J4 1324 aaKnown RBP22.73■■□□□ 1.23
CD9-202ENST00000382515 TJP1Q07157 1748 aa22.73■■□□□ 1.23
CD9-202ENST00000382515 ERVV-1B6SEH8 477 aa22.72■■□□□ 1.23
CD9-202ENST00000382515 DZIP3Q86Y13 1208 aaKnown RBP22.72■■□□□ 1.23
CD9-202ENST00000382515 PDGFDQ9GZP0 370 aaPredicted RBP22.72■■□□□ 1.23
CD9-202ENST00000382515 COL5A3P25940 1745 aaPredicted RBP22.71■■□□□ 1.23
CD9-202ENST00000382515 MYL6BP14649 208 aa22.71■■□□□ 1.23
CD9-202ENST00000382515 POLD1P28340 1107 aa22.71■■□□□ 1.23
CD9-202ENST00000382515 ZNF652Q9Y2D9 606 aa22.71■■□□□ 1.23
CD9-202ENST00000382515 ZNF330Q9Y3S2 320 aaPredicted RBP22.71■■□□□ 1.23
CD9-202ENST00000382515 ZBTB7AO95365 584 aa22.7■■□□□ 1.22
CD9-202ENST00000382515 GYS1P13807 737 aa22.7■■□□□ 1.22
CD9-202ENST00000382515 LRP10Q7Z4F1 713 aa22.7■■□□□ 1.22
CD9-202ENST00000382515 ARXQ96QS3 562 aa22.7■■□□□ 1.22
CD9-202ENST00000382515 CHPF2Q9P2E5 772 aa22.7■■□□□ 1.22
CD9-202ENST00000382515 USPL1Q5W0Q7 1092 aa22.69■■□□□ 1.22
CD9-202ENST00000382515 KIF6Q6ZMV9 814 aa22.69■■□□□ 1.22
CD9-202ENST00000382515 SMIM5Q71RC9 77 aa22.69■■□□□ 1.22
CD9-202ENST00000382515 NECTIN2Q92692 538 aa22.69■■□□□ 1.22
CD9-202ENST00000382515 TBC1D2BQ9UPU7 963 aa22.69■■□□□ 1.22
CD9-202ENST00000382515 MYH14Q7Z406 1995 aaKnown RBP22.68■■□□□ 1.22
CD9-202ENST00000382515 CAMTA2O94983 1202 aa22.67■■□□□ 1.22
CD9-202ENST00000382515 PIP4K2AP48426 406 aaPredicted RBP22.67■■□□□ 1.22
CD9-202ENST00000382515 COPS6Q7L5N1 327 aa22.67■■□□□ 1.22
CD9-202ENST00000382515 ATF5Q9Y2D1 282 aaPredicted RBP22.67■■□□□ 1.22
CD9-202ENST00000382515 QSER1Q2KHR3 1735 aa22.66■■□□□ 1.22
CD9-202ENST00000382515 MAP3K15Q6ZN16 1313 aa22.66■■□□□ 1.22
CD9-202ENST00000382515 SLC4A2P04920 1241 aa22.66■■□□□ 1.22
CD9-202ENST00000382515 SRP68Q9UHB9 627 aaKnown RBP22.66■■□□□ 1.22
CD9-202ENST00000382515 DDX58O95786 925 aaKnown RBP22.65■■□□□ 1.22
CD9-202ENST00000382515 PROSER3Q2NL68 480 aa22.65■■□□□ 1.22
CD9-202ENST00000382515 ANKRD13DQ6ZTN6 518 aa22.65■■□□□ 1.22
CD9-202ENST00000382515 XAGE3Q8WTP9 111 aa22.65■■□□□ 1.22
CD9-202ENST00000382515 UBR3Q6ZT12 1888 aa22.64■■□□□ 1.22
CD9-202ENST00000382515 TM4SF1P30408 202 aa22.64■■□□□ 1.21
CD9-202ENST00000382515 PTGER2P43116 358 aa22.64■■□□□ 1.21
CD9-202ENST00000382515 ALDH1L2Q3SY69 923 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 295.9 ms