RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 VAC14Q08AM6 782 aa5.14□□□□□ -1.59
RFX3-203ENST00000381984 RUBCNLQ9H714 662 aa5.14□□□□□ -1.59
RFX3-203ENST00000381984 PRM3Q9NNZ6 103 aa5.14□□□□□ -1.59
RFX3-203ENST00000381984 YBX3P16989 372 aaKnown RBP eCLIP5.13□□□□□ -1.59
RFX3-203ENST00000381984 TXKP42681 527 aa5.13□□□□□ -1.59
RFX3-203ENST00000381984 NR1H3Q13133 447 aa5.13□□□□□ -1.59
RFX3-203ENST00000381984 SEPT12Q8IYM1 358 aa5.13□□□□□ -1.59
RFX3-203ENST00000381984 ESF1Q9H501 851 aaKnown RBP5.13□□□□□ -1.59
RFX3-203ENST00000381984 ZNF330Q9Y3S2 320 aaPredicted RBP5.13□□□□□ -1.59
RFX3-203ENST00000381984 LBRQ14739 615 aaKnown RBP5.12□□□□□ -1.59
RFX3-203ENST00000381984 ERICH6BQ5W0A0 696 aa5.12□□□□□ -1.59
RFX3-203ENST00000381984 FMNL2Q96PY5 1086 aa5.12□□□□□ -1.59
RFX3-203ENST00000381984 A0A1B0GTH6 734 aa5.11□□□□□ -1.59
RFX3-203ENST00000381984 MSX1P28360 303 aa5.11□□□□□ -1.59
RFX3-203ENST00000381984 ERVK-9P63128 1117 aa5.11□□□□□ -1.59
RFX3-203ENST00000381984 MCM6Q14566 821 aa5.11□□□□□ -1.59
RFX3-203ENST00000381984 FCHSD1Q86WN1 690 aa5.11□□□□□ -1.59
RFX3-203ENST00000381984 POM121Q96HA1 1249 aa5.11□□□□□ -1.59
RFX3-203ENST00000381984 HCN2Q9UL51 889 aa5.11□□□□□ -1.59
RFX3-203ENST00000381984 PCDHB11Q9Y5F2 797 aa5.11□□□□□ -1.59
RFX3-203ENST00000381984 COL17A1Q9UMD9 1497 aaPredicted RBP5.11□□□□□ -1.59
RFX3-203ENST00000381984 PAX4O43316 350 aa5.1□□□□□ -1.59
RFX3-203ENST00000381984 GPR37L1O60883 481 aa5.1□□□□□ -1.59
RFX3-203ENST00000381984 APBA3O96018 575 aa5.1□□□□□ -1.59
RFX3-203ENST00000381984 H2AFB1P0C5Y9 115 aa5.1□□□□□ -1.59
RFX3-203ENST00000381984 H2AFB2P0C5Z0 115 aa5.1□□□□□ -1.59
RFX3-203ENST00000381984 CENPCQ03188 943 aa5.1□□□□□ -1.59
RFX3-203ENST00000381984 FZD5Q13467 585 aa5.1□□□□□ -1.59
RFX3-203ENST00000381984 CC2D2BQ6DHV5 1058 aa5.1□□□□□ -1.59
RFX3-203ENST00000381984 RAD21O60216 631 aa5.09□□□□□ -1.59
RFX3-203ENST00000381984 CSB-PGBD3P0DP91 1061 aa5.09□□□□□ -1.59
RFX3-203ENST00000381984 UBTFP17480 764 aaKnown RBP5.09□□□□□ -1.59
RFX3-203ENST00000381984 IRF5Q13568 498 aa5.09□□□□□ -1.59
RFX3-203ENST00000381984 EFHC2Q5JST6 749 aa5.09□□□□□ -1.59
RFX3-203ENST00000381984 DIEXFQ68CQ4 756 aaKnown RBP5.09□□□□□ -1.59
RFX3-203ENST00000381984 PGBD3Q8N328 593 aa5.09□□□□□ -1.59
RFX3-203ENST00000381984 TRIM52Q96A61 297 aa5.09□□□□□ -1.59
RFX3-203ENST00000381984 ARHGEF10LQ9HCE6 1279 aa5.09□□□□□ -1.59
RFX3-203ENST00000381984 FAM229AH3BQW9 127 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 ADH6P28332 368 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 SCTRP47872 440 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 EIF4G2P78344 907 aaKnown RBP eCLIP5.08□□□□□ -1.6
RFX3-203ENST00000381984 SEMA3FQ13275 785 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 TMEM132AQ24JP5 1023 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 SLFNL1Q499Z3 407 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 OXLD1Q5BKU9 147 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 PRRT3Q5FWE3 981 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 ZCCHC2Q9C0B9 1178 aaKnown RBP5.08□□□□□ -1.6
RFX3-203ENST00000381984 RAB6BQ9NRW1 208 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 COG6Q9Y2V7 657 aa5.08□□□□□ -1.6
RFX3-203ENST00000381984 TRAK2O60296 914 aa5.07□□□□□ -1.6
RFX3-203ENST00000381984 TSGA10IPQ3SY00 556 aa5.07□□□□□ -1.6
RFX3-203ENST00000381984 C4orf17Q53FE4 359 aa5.07□□□□□ -1.6
RFX3-203ENST00000381984 RNF20Q5VTR2 975 aa5.07□□□□□ -1.6
RFX3-203ENST00000381984 CYP2U1Q7Z449 544 aa5.07□□□□□ -1.6
RFX3-203ENST00000381984 CNKSR1Q969H4 720 aa5.07□□□□□ -1.6
RFX3-203ENST00000381984 CLUAP1Q96AJ1 413 aa5.07□□□□□ -1.6
RFX3-203ENST00000381984 CDCA7Q9BWT1 371 aaPredicted RBP5.07□□□□□ -1.6
RFX3-203ENST00000381984 OSBPL3Q9H4L5 887 aa5.07□□□□□ -1.6
RFX3-203ENST00000381984 CEP126Q9P2H0 1117 aa5.07□□□□□ -1.6
RFX3-203ENST00000381984 IL2RAP01589 272 aa5.06□□□□□ -1.6
RFX3-203ENST00000381984 PCBP4P57723 403 aaKnown RBP5.06□□□□□ -1.6
RFX3-203ENST00000381984 COL9A3Q14050 684 aaPredicted RBP5.06□□□□□ -1.6
RFX3-203ENST00000381984 GRIK4Q16099 956 aa5.06□□□□□ -1.6
RFX3-203ENST00000381984 PKNOX2Q96KN3 472 aa5.06□□□□□ -1.6
RFX3-203ENST00000381984 CCDC85AQ96PX6 553 aaPredicted RBP5.06□□□□□ -1.6
RFX3-203ENST00000381984 ESYT1Q9BSJ8 1104 aa5.06□□□□□ -1.6
RFX3-203ENST00000381984 CRISPLD1Q9H336 500 aa5.06□□□□□ -1.6
RFX3-203ENST00000381984 DNAAF2Q9NVR5 837 aaKnown RBP5.06□□□□□ -1.6
RFX3-203ENST00000381984 PODXL2Q9NZ53 605 aa5.06□□□□□ -1.6
RFX3-203ENST00000381984 PCDHGC4Q9Y5F7 938 aa5.06□□□□□ -1.6
RFX3-203ENST00000381984 HRH3Q9Y5N1 445 aa5.06□□□□□ -1.6
RFX3-203ENST00000381984 SPDYE3A6NKU9 549 aa5.05□□□□□ -1.6
RFX3-203ENST00000381984 STAU1O95793 577 aaKnown RBP5.05□□□□□ -1.6
RFX3-203ENST00000381984 WWC1Q8IX03 1113 aa5.05□□□□□ -1.6
RFX3-203ENST00000381984 ZSCAN10Q96SZ4 725 aaPredicted RBP5.05□□□□□ -1.6
RFX3-203ENST00000381984 AVENQ9NQS1 362 aaPredicted RBP5.05□□□□□ -1.6
RFX3-203ENST00000381984 DOLKQ9UPQ8 538 aa5.05□□□□□ -1.6
RFX3-203ENST00000381984 POM121CA8CG34 1229 aa5.04□□□□□ -1.6
RFX3-203ENST00000381984 MYCP01106 439 aaPredicted RBP5.04□□□□□ -1.6
RFX3-203ENST00000381984 ELNP15502 786 aa5.04□□□□□ -1.6
RFX3-203ENST00000381984 TRIM28Q13263 835 aaKnown RBP5.04□□□□□ -1.6
RFX3-203ENST00000381984 WASHC4Q2M389 1173 aa5.04□□□□□ -1.6
RFX3-203ENST00000381984 FAM182BQ5T319 152 aa5.04□□□□□ -1.6
RFX3-203ENST00000381984 ZNF592Q92610 1267 aa5.04□□□□□ -1.6
RFX3-203ENST00000381984 NACC1Q96RE7 527 aa5.04□□□□□ -1.6
RFX3-203ENST00000381984 FHDC1Q9C0D6 1143 aaPredicted RBP5.04□□□□□ -1.6
RFX3-203ENST00000381984 SUPT16HQ9Y5B9 1047 aaKnown RBP5.04□□□□□ -1.6
RFX3-203ENST00000381984 PIK3CDO00329 1044 aa5.03□□□□□ -1.6
RFX3-203ENST00000381984 SOCS7O14512 581 aa5.03□□□□□ -1.6
RFX3-203ENST00000381984 MAPTP10636 758 aaKnown RBP5.03□□□□□ -1.6
RFX3-203ENST00000381984 CD33P20138 364 aa5.03□□□□□ -1.6
RFX3-203ENST00000381984 MCCD1P59942 119 aaPredicted RBP5.03□□□□□ -1.6
RFX3-203ENST00000381984 TNP2Q05952 138 aa5.03□□□□□ -1.6
RFX3-203ENST00000381984 FLIIQ13045 1269 aa5.03□□□□□ -1.6
RFX3-203ENST00000381984 GNASQ5JWF2 1037 aa5.03□□□□□ -1.6
RFX3-203ENST00000381984 TMEM214Q6NUQ4 689 aaKnown RBP5.03□□□□□ -1.6
RFX3-203ENST00000381984 CCDC125Q86Z20 511 aa5.03□□□□□ -1.6
RFX3-203ENST00000381984 XAGE2Q96GT9 111 aa5.03□□□□□ -1.6
RFX3-203ENST00000381984 ATXN7O15265 892 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms