RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 LRRC37A3O60309 1634 aa9.6□□□□□ -0.87
TTC39B-203ENST00000380853 CSB-PGBD3P0DP91 1061 aa9.59□□□□□ -0.87
TTC39B-203ENST00000380853 TOM1L2Q6ZVM7 507 aa9.59□□□□□ -0.87
TTC39B-203ENST00000380853 BBXQ8WY36 941 aaPredicted RBP9.59□□□□□ -0.87
TTC39B-203ENST00000380853 CARD11Q9BXL7 1154 aa9.59□□□□□ -0.87
TTC39B-203ENST00000380853 THRAP3Q9Y2W1 955 aaKnown RBP9.59□□□□□ -0.87
TTC39B-203ENST00000380853 TTC21AQ8NDW8 1320 aa9.59□□□□□ -0.87
TTC39B-203ENST00000380853 AATKQ6ZMQ8 1374 aa9.59□□□□□ -0.87
TTC39B-203ENST00000380853 KTN1Q86UP2 1357 aaKnown RBP9.59□□□□□ -0.87
TTC39B-203ENST00000380853 PARD3Q8TEW0 1356 aa9.59□□□□□ -0.87
TTC39B-203ENST00000380853 APBA3O96018 575 aa9.58□□□□□ -0.88
TTC39B-203ENST00000380853 SWT1Q5T5J6 900 aaKnown RBP9.58□□□□□ -0.88
TTC39B-203ENST00000380853 RBM27Q9P2N5 1060 aaKnown RBP9.58□□□□□ -0.88
TTC39B-203ENST00000380853 TTC21BQ7Z4L5 1316 aa9.58□□□□□ -0.88
TTC39B-203ENST00000380853 OVOS2A0A0G2JMS6 1433 aa9.58□□□□□ -0.88
TTC39B-203ENST00000380853 OVOS2A0A0J9YW53 1432 aa9.58□□□□□ -0.88
TTC39B-203ENST00000380853 OVOS2Q6IE36 1432 aa9.58□□□□□ -0.88
TTC39B-203ENST00000380853 RREB1Q92766 1687 aa9.58□□□□□ -0.88
TTC39B-203ENST00000380853 R3HDM1Q15032 1099 aaKnown RBP9.57□□□□□ -0.88
TTC39B-203ENST00000380853 EZH2Q15910 746 aaKnown RBP9.57□□□□□ -0.88
TTC39B-203ENST00000380853 ZNF787Q6DD87 383 aa9.57□□□□□ -0.88
TTC39B-203ENST00000380853 KCNH5Q8NCM2 988 aa9.57□□□□□ -0.88
TTC39B-203ENST00000380853 NUP188Q5SRE5 1749 aa9.57□□□□□ -0.88
TTC39B-203ENST00000380853 SBNO2Q9Y2G9 1366 aa9.57□□□□□ -0.88
TTC39B-203ENST00000380853 C11orf95C9JLR9 678 aaPredicted RBP9.56□□□□□ -0.88
TTC39B-203ENST00000380853 PADI6Q6TGC4 694 aa9.56□□□□□ -0.88
TTC39B-203ENST00000380853 HDGFL2Q7Z4V5 671 aaPredicted RBP9.56□□□□□ -0.88
TTC39B-203ENST00000380853 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
TTC39B-203ENST00000380853 ARIH1Q9Y4X5 557 aaPredicted RBP9.56□□□□□ -0.88
TTC39B-203ENST00000380853 COL18A1P39060 1754 aa9.56□□□□□ -0.88
TTC39B-203ENST00000380853 RGPD5Q99666 1765 aa9.56□□□□□ -0.88
TTC39B-203ENST00000380853 ABCC6O95255 1503 aa9.56□□□□□ -0.88
TTC39B-203ENST00000380853 WDR17Q8IZU2 1322 aa9.56□□□□□ -0.88
TTC39B-203ENST00000380853 DDB1Q16531 1140 aa9.56□□□□□ -0.88
TTC39B-203ENST00000380853 NBPF14Q5TI25 921 aa9.56□□□□□ -0.88
TTC39B-203ENST00000380853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.56□□□□□ -0.88
TTC39B-203ENST00000380853 NFAT5O94916 1531 aa9.55□□□□□ -0.88
TTC39B-203ENST00000380853 TTC13Q8NBP0 860 aa9.55□□□□□ -0.88
TTC39B-203ENST00000380853 LTN1O94822 1766 aa9.55□□□□□ -0.88
TTC39B-203ENST00000380853 RGPD3A6NKT7 1758 aaPredicted RBP9.54□□□□□ -0.88
TTC39B-203ENST00000380853 RGPD4Q7Z3J3 1758 aa9.54□□□□□ -0.88
TTC39B-203ENST00000380853 PEAK1Q9H792 1746 aa9.54□□□□□ -0.88
TTC39B-203ENST00000380853 USP54Q70EL1 1684 aa9.54□□□□□ -0.88
TTC39B-203ENST00000380853 GGCXP38435 758 aa9.54□□□□□ -0.88
TTC39B-203ENST00000380853 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
TTC39B-203ENST00000380853 SLF2Q8IX21 1173 aa9.54□□□□□ -0.88
TTC39B-203ENST00000380853 CAMKK2Q96RR4 588 aa9.54□□□□□ -0.88
TTC39B-203ENST00000380853 CDCA7Q9BWT1 371 aaPredicted RBP9.54□□□□□ -0.88
TTC39B-203ENST00000380853 NPDC1Q9NQX5 325 aaPredicted RBP9.54□□□□□ -0.88
TTC39B-203ENST00000380853 TERF2IPQ9NYB0 399 aa9.54□□□□□ -0.88
TTC39B-203ENST00000380853 CCDC7Q96M83 1385 aa9.53□□□□□ -0.88
TTC39B-203ENST00000380853 ZPR1O75312 459 aa9.53□□□□□ -0.88
TTC39B-203ENST00000380853 ARHGEF25Q86VW2 580 aa9.53□□□□□ -0.88
TTC39B-203ENST00000380853 SBF2Q86WG5 1849 aa9.53□□□□□ -0.88
TTC39B-203ENST00000380853 EDC4Q6P2E9 1401 aaKnown RBP9.52□□□□□ -0.89
TTC39B-203ENST00000380853 NME9Q86XW9 330 aa9.52□□□□□ -0.89
TTC39B-203ENST00000380853 SPRYD3Q8NCJ5 442 aa9.52□□□□□ -0.89
TTC39B-203ENST00000380853 NECTIN2Q92692 538 aa9.52□□□□□ -0.89
TTC39B-203ENST00000380853 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.89
TTC39B-203ENST00000380853 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
TTC39B-203ENST00000380853 NINLQ9Y2I6 1382 aa9.51□□□□□ -0.89
TTC39B-203ENST00000380853 TRIM67Q6ZTA4 783 aa9.51□□□□□ -0.89
TTC39B-203ENST00000380853 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
TTC39B-203ENST00000380853 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
TTC39B-203ENST00000380853 NLRP2Q9NX02 1062 aa9.51□□□□□ -0.89
TTC39B-203ENST00000380853 PPP1R1BQ9UD71 204 aaPredicted RBP9.51□□□□□ -0.89
TTC39B-203ENST00000380853 A0A1W2PP64 1363 aa9.5□□□□□ -0.89
TTC39B-203ENST00000380853 USP31Q70CQ4 1352 aa9.5□□□□□ -0.89
TTC39B-203ENST00000380853 FAM208AQ9UK61 1670 aaKnown RBP9.5□□□□□ -0.89
TTC39B-203ENST00000380853 CD163L1Q9NR16 1453 aa9.5□□□□□ -0.89
TTC39B-203ENST00000380853 EMID1Q96A84 441 aaPredicted RBP9.5□□□□□ -0.89
TTC39B-203ENST00000380853 TMUB1Q9BVT8 246 aa9.5□□□□□ -0.89
TTC39B-203ENST00000380853 EXOC5O00471 708 aa9.49□□□□□ -0.89
TTC39B-203ENST00000380853 TLL1O43897 1013 aa9.49□□□□□ -0.89
TTC39B-203ENST00000380853 TRIM26Q12899 539 aaPredicted RBP9.49□□□□□ -0.89
TTC39B-203ENST00000380853 BLOC1S3Q6QNY0 202 aa9.49□□□□□ -0.89
TTC39B-203ENST00000380853 SLC12A5Q9H2X9 1139 aa9.49□□□□□ -0.89
TTC39B-203ENST00000380853 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
TTC39B-203ENST00000380853 NHSQ6T4R5 1651 aa9.49□□□□□ -0.89
TTC39B-203ENST00000380853 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
TTC39B-203ENST00000380853 SLC24A1O60721 1099 aa9.48□□□□□ -0.89
TTC39B-203ENST00000380853 MARCH10Q8NA82 808 aaPredicted RBP9.48□□□□□ -0.89
TTC39B-203ENST00000380853 EYA1Q99502 592 aa9.48□□□□□ -0.89
TTC39B-203ENST00000380853 EP400Q96L91 3159 aa9.48□□□□□ -0.89
TTC39B-203ENST00000380853 BCL9O00512 1426 aa9.47□□□□□ -0.89
TTC39B-203ENST00000380853 IL2RBP14784 551 aa9.47□□□□□ -0.89
TTC39B-203ENST00000380853 ANKRD24Q8TF21 1146 aa9.47□□□□□ -0.89
TTC39B-203ENST00000380853 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
TTC39B-203ENST00000380853 COG3Q96JB2 828 aa9.47□□□□□ -0.89
TTC39B-203ENST00000380853 SPON1Q9HCB6 807 aa9.47□□□□□ -0.89
TTC39B-203ENST00000380853 USP47Q96K76 1375 aa9.47□□□□□ -0.89
TTC39B-203ENST00000380853 ST20-MTHFSA0A0A6YYL1 179 aa9.46□□□□□ -0.9
TTC39B-203ENST00000380853 PLSCR1O15162 318 aa9.46□□□□□ -0.9
TTC39B-203ENST00000380853 SLC19A1P41440 591 aa9.46□□□□□ -0.9
TTC39B-203ENST00000380853 TMF1P82094 1093 aa9.46□□□□□ -0.9
TTC39B-203ENST00000380853 PUS7Q96PZ0 661 aaKnown RBP9.46□□□□□ -0.9
TTC39B-203ENST00000380853 STK32BQ9NY57 414 aa9.46□□□□□ -0.9
TTC39B-203ENST00000380853 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
TTC39B-203ENST00000380853 AMPHP49418 695 aa9.45□□□□□ -0.9
TTC39B-203ENST00000380853 ACSBG1Q96GR2 724 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms