RNA–Protein interactions for RNA: ENST00000378800.3

CCL19-202, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2 BASIC

Gene CCL19, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-202ENST00000378800 KLHL34Q8N239 644 aa17.47■□□□□ 0.39
CCL19-202ENST00000378800 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
CCL19-202ENST00000378800 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
CCL19-202ENST00000378800 MMP10P09238 476 aa17.46■□□□□ 0.39
CCL19-202ENST00000378800 NLGN2Q8NFZ4 835 aa17.46■□□□□ 0.39
CCL19-202ENST00000378800 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
CCL19-202ENST00000378800 EIF5P55010 431 aaKnown RBP17.45■□□□□ 0.38
CCL19-202ENST00000378800 FKBP8Q14318 412 aa17.45■□□□□ 0.38
CCL19-202ENST00000378800 PNISRQ8TF01 805 aaKnown RBP17.45■□□□□ 0.38
CCL19-202ENST00000378800 USP42Q9H9J4 1324 aaKnown RBP17.45■□□□□ 0.38
CCL19-202ENST00000378800 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
CCL19-202ENST00000378800 TJP1Q07157 1748 aa17.44■□□□□ 0.38
CCL19-202ENST00000378800 APAF1O14727 1248 aa17.43■□□□□ 0.38
CCL19-202ENST00000378800 PIP4K2AP48426 406 aaPredicted RBP17.43■□□□□ 0.38
CCL19-202ENST00000378800 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
CCL19-202ENST00000378800 USPL1Q5W0Q7 1092 aa17.43■□□□□ 0.38
CCL19-202ENST00000378800 ZPR1O75312 459 aa17.42■□□□□ 0.38
CCL19-202ENST00000378800 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
CCL19-202ENST00000378800 BCL2L12Q9HB09 334 aa17.42■□□□□ 0.38
CCL19-202ENST00000378800 NARFQ9UHQ1 456 aa17.42■□□□□ 0.38
CCL19-202ENST00000378800 MYH14Q7Z406 1995 aaKnown RBP17.42■□□□□ 0.38
CCL19-202ENST00000378800 COL5A3P25940 1745 aaPredicted RBP17.41■□□□□ 0.38
CCL19-202ENST00000378800 GIGYF1O75420 1035 aaPredicted RBP17.41■□□□□ 0.38
CCL19-202ENST00000378800 TM4SF1P30408 202 aa17.41■□□□□ 0.38
CCL19-202ENST00000378800 MRS2Q9HD23 443 aa17.41■□□□□ 0.38
CCL19-202ENST00000378800 CD2APQ9Y5K6 639 aa17.41■□□□□ 0.38
CCL19-202ENST00000378800 COL15A1P39059 1388 aa17.4■□□□□ 0.38
CCL19-202ENST00000378800 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
CCL19-202ENST00000378800 NBPF26B4DH59 902 aa17.4■□□□□ 0.38
CCL19-202ENST00000378800 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
CCL19-202ENST00000378800 NBPF10Q6P3W6 841 aaKnown RBP17.4■□□□□ 0.38
CCL19-202ENST00000378800 NBPF15Q8N660 670 aa17.4■□□□□ 0.38
CCL19-202ENST00000378800 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
CCL19-202ENST00000378800 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
CCL19-202ENST00000378800 ZNF330Q9Y3S2 320 aaPredicted RBP17.4■□□□□ 0.38
CCL19-202ENST00000378800 COL24A1Q17RW2 1714 aa17.4■□□□□ 0.38
CCL19-202ENST00000378800 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.38
CCL19-202ENST00000378800 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
CCL19-202ENST00000378800 SENP3-EIF4A1A0A087X0R7 540 aa17.39■□□□□ 0.37
CCL19-202ENST00000378800 CHL1O00533 1208 aa17.39■□□□□ 0.37
CCL19-202ENST00000378800 DDR1Q08345 913 aa17.39■□□□□ 0.37
CCL19-202ENST00000378800 A0A087WZG4 1122 aa17.38■□□□□ 0.37
CCL19-202ENST00000378800 BABAM1Q9NWV8 329 aa17.38■□□□□ 0.37
CCL19-202ENST00000378800 PARP3Q9Y6F1 533 aa17.38■□□□□ 0.37
CCL19-202ENST00000378800 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
CCL19-202ENST00000378800 NFIXQ14938 502 aa17.37■□□□□ 0.37
CCL19-202ENST00000378800 LAS1LQ9Y4W2 734 aaKnown RBP17.37■□□□□ 0.37
CCL19-202ENST00000378800 POLRMTO00411 1230 aaKnown RBP17.36■□□□□ 0.37
CCL19-202ENST00000378800 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
CCL19-202ENST00000378800 GPR162Q16538 588 aa17.35■□□□□ 0.37
CCL19-202ENST00000378800 VIRMAQ69YN4 1812 aaKnown RBP17.35■□□□□ 0.37
CCL19-202ENST00000378800 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
CCL19-202ENST00000378800 TBC1D9BQ66K14 1250 aa17.34■□□□□ 0.37
CCL19-202ENST00000378800 BICDL1Q6ZP65 573 aa17.34■□□□□ 0.37
CCL19-202ENST00000378800 DZIP3Q86Y13 1208 aaKnown RBP17.34■□□□□ 0.37
CCL19-202ENST00000378800 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
CCL19-202ENST00000378800 A0A0G2JLW4 131 aa17.33■□□□□ 0.36
CCL19-202ENST00000378800 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.36
CCL19-202ENST00000378800 SERPINB2P05120 415 aa17.32■□□□□ 0.36
CCL19-202ENST00000378800 ZNF853P0CG23 659 aa17.32■□□□□ 0.36
CCL19-202ENST00000378800 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
CCL19-202ENST00000378800 NGEFQ8N5V2 710 aa17.32■□□□□ 0.36
CCL19-202ENST00000378800 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
CCL19-202ENST00000378800 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
CCL19-202ENST00000378800 DLG5Q8TDM6 1919 aa17.31■□□□□ 0.36
CCL19-202ENST00000378800 MYL6BP14649 208 aa17.31■□□□□ 0.36
CCL19-202ENST00000378800 EIF2S2P20042 333 aaKnown RBP17.31■□□□□ 0.36
CCL19-202ENST00000378800 TGFB2P61812 414 aa17.31■□□□□ 0.36
CCL19-202ENST00000378800 PDIA6Q15084 440 aa17.31■□□□□ 0.36
CCL19-202ENST00000378800 DPEP1P16444 411 aa17.3■□□□□ 0.36
CCL19-202ENST00000378800 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
CCL19-202ENST00000378800 MBIPQ9NS73 344 aa17.3■□□□□ 0.36
CCL19-202ENST00000378800 KCNA3P22001 575 aa17.29■□□□□ 0.36
CCL19-202ENST00000378800 TTLL7Q6ZT98 887 aa17.29■□□□□ 0.36
CCL19-202ENST00000378800 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
CCL19-202ENST00000378800 C4AP0C0L4 1744 aa17.29■□□□□ 0.36
CCL19-202ENST00000378800 C10orf71Q711Q0 1435 aa17.29■□□□□ 0.36
CCL19-202ENST00000378800 ANXA1P04083 346 aa17.28■□□□□ 0.36
CCL19-202ENST00000378800 HLFQ16534 295 aa17.28■□□□□ 0.36
CCL19-202ENST00000378800 PROSER3Q2NL68 480 aa17.28■□□□□ 0.36
CCL19-202ENST00000378800 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
CCL19-202ENST00000378800 WWC1Q8IX03 1113 aa17.28■□□□□ 0.36
CCL19-202ENST00000378800 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
CCL19-202ENST00000378800 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
CCL19-202ENST00000378800 CCDC27Q2M243 656 aa17.27■□□□□ 0.36
CCL19-202ENST00000378800 CLEC4GQ6UXB4 293 aa17.27■□□□□ 0.36
CCL19-202ENST00000378800 CCDC24Q8N4L8 307 aa17.27■□□□□ 0.36
CCL19-202ENST00000378800 SETDB2Q96T68 719 aa17.27■□□□□ 0.36
CCL19-202ENST00000378800 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.36
CCL19-202ENST00000378800 PXDNLA1KZ92 1463 aa17.26■□□□□ 0.35
CCL19-202ENST00000378800 KDM3BQ7LBC6 1761 aa17.26■□□□□ 0.35
CCL19-202ENST00000378800 CHRNA5P30532 468 aa17.26■□□□□ 0.35
CCL19-202ENST00000378800 GNAI1P63096 354 aa17.26■□□□□ 0.35
CCL19-202ENST00000378800 ERBB4Q15303 1308 aa17.25■□□□□ 0.35
CCL19-202ENST00000378800 GRIN3BO60391 1043 aa17.25■□□□□ 0.35
CCL19-202ENST00000378800 YY1P25490 414 aa17.25■□□□□ 0.35
CCL19-202ENST00000378800 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
CCL19-202ENST00000378800 ERVV-1B6SEH8 477 aa17.24■□□□□ 0.35
CCL19-202ENST00000378800 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
CCL19-202ENST00000378800 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms