RNA–Protein interactions for RNA: ENST00000378611.8

C16orf46-202, Transcript of chromosome 16 open reading frame 46, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C16orf46, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf46-202ENST00000378611 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
C16orf46-202ENST00000378611 UBR3Q6ZT12 1888 aa16.38■□□□□ 0.21
C16orf46-202ENST00000378611 EIF2S2P20042 333 aaKnown RBP16.37■□□□□ 0.21
C16orf46-202ENST00000378611 BAG6P46379 1132 aa16.37■□□□□ 0.21
C16orf46-202ENST00000378611 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
C16orf46-202ENST00000378611 ANXA1P04083 346 aa16.36■□□□□ 0.21
C16orf46-202ENST00000378611 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
C16orf46-202ENST00000378611 A1BGP04217 495 aa16.35■□□□□ 0.21
C16orf46-202ENST00000378611 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
C16orf46-202ENST00000378611 CACNA1FO60840 1977 aa16.35■□□□□ 0.21
C16orf46-202ENST00000378611 VAMP4O75379 141 aa16.35■□□□□ 0.21
C16orf46-202ENST00000378611 CYP19A1P11511 503 aaPredicted RBP16.35■□□□□ 0.21
C16orf46-202ENST00000378611 PROSER3Q2NL68 480 aa16.35■□□□□ 0.21
C16orf46-202ENST00000378611 C4AP0C0L4 1744 aa16.34■□□□□ 0.21
C16orf46-202ENST00000378611 BCL2L13Q9BXK5 485 aa16.34■□□□□ 0.21
C16orf46-202ENST00000378611 CRKLP46109 303 aaKnown RBP16.33■□□□□ 0.21
C16orf46-202ENST00000378611 CCDC125Q86Z20 511 aa16.33■□□□□ 0.21
C16orf46-202ENST00000378611 VSIG10Q8N0Z9 540 aa16.33■□□□□ 0.21
C16orf46-202ENST00000378611 ANO8Q9HCE9 1232 aaPredicted RBP16.33■□□□□ 0.21
C16orf46-202ENST00000378611 NBPF26B4DH59 902 aa16.33■□□□□ 0.2
C16orf46-202ENST00000378611 ZNF827Q17R98 1081 aa16.33■□□□□ 0.2
C16orf46-202ENST00000378611 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
C16orf46-202ENST00000378611 NBPF14Q5TI25 921 aa16.33■□□□□ 0.2
C16orf46-202ENST00000378611 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.2
C16orf46-202ENST00000378611 NBPF15Q8N660 670 aa16.33■□□□□ 0.2
C16orf46-202ENST00000378611 ZBTB1Q9Y2K1 713 aa16.33■□□□□ 0.2
C16orf46-202ENST00000378611 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
C16orf46-202ENST00000378611 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
C16orf46-202ENST00000378611 CHPF2Q9P2E5 772 aa16.32■□□□□ 0.2
C16orf46-202ENST00000378611 MYL6BP14649 208 aa16.31■□□□□ 0.2
C16orf46-202ENST00000378611 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
C16orf46-202ENST00000378611 PDIA6Q15084 440 aa16.31■□□□□ 0.2
C16orf46-202ENST00000378611 ZNF330Q9Y3S2 320 aaPredicted RBP16.31■□□□□ 0.2
C16orf46-202ENST00000378611 CCDC87Q9NVE4 849 aa16.3■□□□□ 0.2
C16orf46-202ENST00000378611 GNPATO15228 680 aa16.29■□□□□ 0.2
C16orf46-202ENST00000378611 STARD3NLO95772 234 aa16.29■□□□□ 0.2
C16orf46-202ENST00000378611 G2E3Q7L622 706 aa16.29■□□□□ 0.2
C16orf46-202ENST00000378611 SSH1Q8WYL5 1049 aa16.29■□□□□ 0.2
C16orf46-202ENST00000378611 CNTNAP4Q9C0A0 1308 aa16.28■□□□□ 0.2
C16orf46-202ENST00000378611 PHF14O94880 888 aa16.28■□□□□ 0.2
C16orf46-202ENST00000378611 HOXB7P09629 217 aa16.28■□□□□ 0.2
C16orf46-202ENST00000378611 NUP98P52948 1817 aa16.28■□□□□ 0.2
C16orf46-202ENST00000378611 ARFGEF2Q9Y6D5 1785 aa16.28■□□□□ 0.2
C16orf46-202ENST00000378611 QSER1Q2KHR3 1735 aa16.27■□□□□ 0.2
C16orf46-202ENST00000378611 BCAR3O75815 825 aa16.27■□□□□ 0.2
C16orf46-202ENST00000378611 LRP10Q7Z4F1 713 aa16.27■□□□□ 0.2
C16orf46-202ENST00000378611 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
C16orf46-202ENST00000378611 TEX13AQ9BXU3 409 aaPredicted RBP16.27■□□□□ 0.2
C16orf46-202ENST00000378611 PHAXQ9H814 394 aaKnown RBP16.27■□□□□ 0.2
C16orf46-202ENST00000378611 BCORQ6W2J9 1755 aa16.27■□□□□ 0.2
C16orf46-202ENST00000378611 AK7Q96M32 723 aa16.27■□□□□ 0.19
C16orf46-202ENST00000378611 RARSP54136 660 aaKnown RBP16.26■□□□□ 0.19
C16orf46-202ENST00000378611 CCDC30Q5VVM6 783 aa16.26■□□□□ 0.19
C16orf46-202ENST00000378611 PDGFDQ9GZP0 370 aaPredicted RBP16.26■□□□□ 0.19
C16orf46-202ENST00000378611 SOS1Q07889 1333 aaPredicted RBP16.25■□□□□ 0.19
C16orf46-202ENST00000378611 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
C16orf46-202ENST00000378611 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
C16orf46-202ENST00000378611 TTLL7Q6ZT98 887 aa16.25■□□□□ 0.19
C16orf46-202ENST00000378611 DDX21Q9NR30 783 aaKnown RBP eCLIP16.25■□□□□ 0.19
C16orf46-202ENST00000378611 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
C16orf46-202ENST00000378611 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
C16orf46-202ENST00000378611 RC3H1Q5TC82 1133 aaKnown RBP16.24■□□□□ 0.19
C16orf46-202ENST00000378611 MRPL50Q8N5N7 158 aaKnown RBP16.24■□□□□ 0.19
C16orf46-202ENST00000378611 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
C16orf46-202ENST00000378611 COL15A1P39059 1388 aa16.24■□□□□ 0.19
C16orf46-202ENST00000378611 XAGE3Q8WTP9 111 aa16.23■□□□□ 0.19
C16orf46-202ENST00000378611 ARXQ96QS3 562 aa16.23■□□□□ 0.19
C16orf46-202ENST00000378611 STK31Q9BXU1 1019 aa16.23■□□□□ 0.19
C16orf46-202ENST00000378611 DBF4Q9UBU7 674 aaPredicted RBP16.23■□□□□ 0.19
C16orf46-202ENST00000378611 TBC1D2BQ9UPU7 963 aa16.23■□□□□ 0.19
C16orf46-202ENST00000378611 AFDNP55196 1824 aaKnown RBP16.23■□□□□ 0.19
C16orf46-202ENST00000378611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.22■□□□□ 0.19
C16orf46-202ENST00000378611 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 EIF5P55010 431 aaKnown RBP16.22■□□□□ 0.19
C16orf46-202ENST00000378611 SLC15A2Q16348 729 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
C16orf46-202ENST00000378611 RCAN3Q9UKA8 241 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 TNNQ9UQP3 1299 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 ANKRD36CQ5JPF3 1778 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 SOCS7O14512 581 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 COPS6Q7L5N1 327 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 ZNF428Q96B54 188 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 RTCBQ9Y3I0 505 aaKnown RBP16.22■□□□□ 0.19
C16orf46-202ENST00000378611 CASZ1Q86V15 1759 aa16.22■□□□□ 0.19
C16orf46-202ENST00000378611 PSDA5PKW4 1024 aaPredicted RBP16.21■□□□□ 0.19
C16orf46-202ENST00000378611 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
C16orf46-202ENST00000378611 STK32BQ9NY57 414 aa16.21■□□□□ 0.19
C16orf46-202ENST00000378611 ERBB4Q15303 1308 aa16.21■□□□□ 0.19
C16orf46-202ENST00000378611 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
C16orf46-202ENST00000378611 IL6STP40189 918 aaPredicted RBP16.2■□□□□ 0.18
C16orf46-202ENST00000378611 COL23A1Q86Y22 540 aaPredicted RBP16.2■□□□□ 0.18
C16orf46-202ENST00000378611 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
C16orf46-202ENST00000378611 PLIN1O60240 522 aa16.2■□□□□ 0.18
C16orf46-202ENST00000378611 FLIIQ13045 1269 aa16.2■□□□□ 0.18
C16orf46-202ENST00000378611 R3HDM1Q15032 1099 aaKnown RBP16.2■□□□□ 0.18
C16orf46-202ENST00000378611 ALDH1L2Q3SY69 923 aa16.2■□□□□ 0.18
C16orf46-202ENST00000378611 MSH5O43196 834 aa16.19■□□□□ 0.18
C16orf46-202ENST00000378611 DZIP3Q86Y13 1208 aaKnown RBP16.19■□□□□ 0.18
C16orf46-202ENST00000378611 FRAT1Q92837 279 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms