RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 CCDC87Q9NVE4 849 aa43.35■■■■■ 4.53
PPP1CA-203ENST00000376745 RTCBQ9Y3I0 505 aaKnown RBP43.35■■■■■ 4.53
PPP1CA-203ENST00000376745 PRAMEF22A3QJZ6 481 aa43.34■■■■■ 4.53
PPP1CA-203ENST00000376745 NGEFQ8N5V2 710 aa43.32■■■■■ 4.53
PPP1CA-203ENST00000376745 SLC16A10Q8TF71 515 aa43.32■■■■■ 4.53
PPP1CA-203ENST00000376745 USP16Q9Y5T5 823 aa43.32■■■■■ 4.53
PPP1CA-203ENST00000376745 GIGYF1O75420 1035 aaPredicted RBP43.32■■■■■ 4.52
PPP1CA-203ENST00000376745 PHF14O94880 888 aa43.32■■■■■ 4.52
PPP1CA-203ENST00000376745 IFT57Q9NWB7 429 aa43.32■■■■■ 4.52
PPP1CA-203ENST00000376745 LAS1LQ9Y4W2 734 aaKnown RBP43.32■■■■■ 4.52
PPP1CA-203ENST00000376745 ZBTB7AO95365 584 aa43.29■■■■■ 4.52
PPP1CA-203ENST00000376745 ADRA2BP18089 450 aa43.29■■■■■ 4.52
PPP1CA-203ENST00000376745 ZBTB1Q9Y2K1 713 aa43.29■■■■■ 4.52
PPP1CA-203ENST00000376745 MTFR1LQ9H019 292 aa43.28■■■■■ 4.52
PPP1CA-203ENST00000376745 SALL2Q9Y467 1007 aaPredicted RBP43.28■■■■■ 4.52
PPP1CA-203ENST00000376745 GNAI1P63096 354 aa43.27■■■■■ 4.52
PPP1CA-203ENST00000376745 TRAPPC3LQ5T215 181 aa43.27■■■■■ 4.52
PPP1CA-203ENST00000376745 SRCAPQ6ZRS2 3230 aa43.27■■■■■ 4.52
PPP1CA-203ENST00000376745 MBIPQ9NS73 344 aa43.26■■■■■ 4.52
PPP1CA-203ENST00000376745 SOS1Q07889 1333 aaPredicted RBP43.25■■■■■ 4.51
PPP1CA-203ENST00000376745 MSH5O43196 834 aa43.25■■■■■ 4.51
PPP1CA-203ENST00000376745 ARHGEF1Q92888 912 aaKnown RBP43.25■■■■■ 4.51
PPP1CA-203ENST00000376745 SPON1Q9HCB6 807 aa43.24■■■■■ 4.51
PPP1CA-203ENST00000376745 A1BGP04217 495 aa43.23■■■■■ 4.51
PPP1CA-203ENST00000376745 IL16Q14005 1332 aa43.22■■■■■ 4.51
PPP1CA-203ENST00000376745 WDR63Q8IWG1 891 aa43.21■■■■■ 4.51
PPP1CA-203ENST00000376745 ATF5Q9Y2D1 282 aaPredicted RBP43.21■■■■■ 4.51
PPP1CA-203ENST00000376745 LRP5O75197 1615 aa43.2■■■■■ 4.51
PPP1CA-203ENST00000376745 CANXP27824 592 aaKnown RBP43.2■■■■■ 4.51
PPP1CA-203ENST00000376745 EIF5P55010 431 aaKnown RBP43.19■■■■■ 4.5
PPP1CA-203ENST00000376745 LAMB4A4D0S4 1761 aa43.18■■■■■ 4.5
PPP1CA-203ENST00000376745 SGIP1Q9BQI5 828 aa43.18■■■■■ 4.5
PPP1CA-203ENST00000376745 PTGER2P43116 358 aa43.17■■■■■ 4.5
PPP1CA-203ENST00000376745 KRT24Q2M2I5 525 aa43.17■■■■■ 4.5
PPP1CA-203ENST00000376745 ZNF521Q96K83 1311 aa43.16■■■■■ 4.5
PPP1CA-203ENST00000376745 IL6STP40189 918 aaPredicted RBP43.16■■■■■ 4.5
PPP1CA-203ENST00000376745 COL24A1Q17RW2 1714 aa43.15■■■■■ 4.5
PPP1CA-203ENST00000376745 RFC4P35249 363 aa43.15■■■■■ 4.5
PPP1CA-203ENST00000376745 COL15A1P39059 1388 aa43.15■■■■■ 4.5
PPP1CA-203ENST00000376745 C4AP0C0L4 1744 aa43.14■■■■■ 4.5
PPP1CA-203ENST00000376745 NBPF26B4DH59 902 aa43.13■■■■■ 4.5
PPP1CA-203ENST00000376745 NBPF10Q6P3W6 841 aaKnown RBP43.13■■■■■ 4.5
PPP1CA-203ENST00000376745 NBPF15Q8N660 670 aa43.13■■■■■ 4.5
PPP1CA-203ENST00000376745 USP42Q9H9J4 1324 aaKnown RBP43.1■■■■■ 4.49
PPP1CA-203ENST00000376745 HOXB7P09629 217 aa43.1■■■■■ 4.49
PPP1CA-203ENST00000376745 PIP4K2AP48426 406 aaPredicted RBP43.1■■■■■ 4.49
PPP1CA-203ENST00000376745 MSL1Q68DK7 614 aa43.08■■■■■ 4.49
PPP1CA-203ENST00000376745 TSR2Q969E8 191 aaKnown RBP43.08■■■■■ 4.49
PPP1CA-203ENST00000376745 GYS1P13807 737 aa43.07■■■■■ 4.49
PPP1CA-203ENST00000376745 DUSP27Q5VZP5 1158 aa43.06■■■■■ 4.48
PPP1CA-203ENST00000376745 SPINK5Q9NQ38 1064 aaPredicted RBP43.06■■■■■ 4.48
PPP1CA-203ENST00000376745 SRP68Q9UHB9 627 aaKnown RBP43.06■■■■■ 4.48
PPP1CA-203ENST00000376745 NARFQ9UHQ1 456 aa43.06■■■■■ 4.48
PPP1CA-203ENST00000376745 A0A087WZG4 1122 aa43.06■■■■■ 4.48
PPP1CA-203ENST00000376745 ERBB4Q15303 1308 aa43.05■■■■■ 4.48
PPP1CA-203ENST00000376745 EIF2S2P20042 333 aaKnown RBP43.04■■■■■ 4.48
PPP1CA-203ENST00000376745 C8orf58Q8NAV2 365 aa43.03■■■■■ 4.48
PPP1CA-203ENST00000376745 ZPR1O75312 459 aa43.02■■■■■ 4.48
PPP1CA-203ENST00000376745 NLGN1Q8N2Q7 840 aa43.02■■■■■ 4.48
PPP1CA-203ENST00000376745 ZNF330Q9Y3S2 320 aaPredicted RBP43.02■■■■■ 4.48
PPP1CA-203ENST00000376745 PDIA6Q15084 440 aa43.01■■■■■ 4.48
PPP1CA-203ENST00000376745 FANCIQ9NVI1 1328 aa43.01■■■■■ 4.48
PPP1CA-203ENST00000376745 POLD1P28340 1107 aa43■■■■■ 4.47
PPP1CA-203ENST00000376745 USPL1Q5W0Q7 1092 aa43■■■■■ 4.47
PPP1CA-203ENST00000376745 NPM2Q86SE8 214 aaKnown RBP42.99■■■■■ 4.47
PPP1CA-203ENST00000376745 TBC1D2BQ9UPU7 963 aa42.99■■■■■ 4.47
PPP1CA-203ENST00000376745 ELL2O00472 640 aaPredicted RBP42.97■■■■■ 4.47
PPP1CA-203ENST00000376745 FKBP8Q14318 412 aa42.97■■■■■ 4.47
PPP1CA-203ENST00000376745 LRP10Q7Z4F1 713 aa42.97■■■■■ 4.47
PPP1CA-203ENST00000376745 BCL2L12Q9HB09 334 aa42.97■■■■■ 4.47
PPP1CA-203ENST00000376745 HDGFL1Q5TGJ6 251 aa42.96■■■■■ 4.47
PPP1CA-203ENST00000376745 TSPYL6Q8N831 410 aa42.96■■■■■ 4.47
PPP1CA-203ENST00000376745 NECTIN2Q92692 538 aa42.95■■■■■ 4.47
PPP1CA-203ENST00000376745 ARXQ96QS3 562 aa42.95■■■■■ 4.47
PPP1CA-203ENST00000376745 DZIP3Q86Y13 1208 aaKnown RBP42.94■■■■■ 4.47
PPP1CA-203ENST00000376745 MYH16Q9H6N6 1097 aa42.94■■■■■ 4.47
PPP1CA-203ENST00000376745 CAMTA2O94983 1202 aa42.94■■■■■ 4.46
PPP1CA-203ENST00000376745 MYL6BP14649 208 aa42.94■■■■■ 4.46
PPP1CA-203ENST00000376745 GOLGA2Q08379 1002 aa42.94■■■■■ 4.46
PPP1CA-203ENST00000376745 PROSER3Q2NL68 480 aa42.93■■■■■ 4.46
PPP1CA-203ENST00000376745 PPP1R1BQ9UD71 204 aaPredicted RBP42.93■■■■■ 4.46
PPP1CA-203ENST00000376745 DDX21Q9NR30 783 aaKnown RBP eCLIP42.92■■■■■ 4.46
PPP1CA-203ENST00000376745 MMP10P09238 476 aa42.91■■■■■ 4.46
PPP1CA-203ENST00000376745 SCN7AQ01118 1682 aa42.89■■■■■ 4.46
PPP1CA-203ENST00000376745 ANXA1P04083 346 aa42.88■■■■■ 4.46
PPP1CA-203ENST00000376745 TM4SF1P30408 202 aa42.88■■■■■ 4.46
PPP1CA-203ENST00000376745 CHPF2Q9P2E5 772 aa42.88■■■■■ 4.46
PPP1CA-203ENST00000376745 TWISTNBQ3B726 338 aaPredicted RBP42.87■■■■■ 4.45
PPP1CA-203ENST00000376745 DBF4Q9UBU7 674 aaPredicted RBP42.87■■■■■ 4.45
PPP1CA-203ENST00000376745 E9PSI1 815 aa42.87■■■■■ 4.45
PPP1CA-203ENST00000376745 EXOSC9Q06265 439 aaKnown RBP42.87■■■■■ 4.45
PPP1CA-203ENST00000376745 RGL2O15211 777 aa42.86■■■■■ 4.45
PPP1CA-203ENST00000376745 BCORQ6W2J9 1755 aa42.85■■■■■ 4.45
PPP1CA-203ENST00000376745 SLFN5Q08AF3 891 aa42.85■■■■■ 4.45
PPP1CA-203ENST00000376745 TTLL7Q6ZT98 887 aa42.85■■■■■ 4.45
PPP1CA-203ENST00000376745 CHMP4AQ9BY43 222 aa42.85■■■■■ 4.45
PPP1CA-203ENST00000376745 NFIXQ14938 502 aa42.83■■■■■ 4.45
PPP1CA-203ENST00000376745 CLEC4GQ6UXB4 293 aa42.83■■■■■ 4.45
PPP1CA-203ENST00000376745 DDR1Q08345 913 aa42.82■■■■■ 4.45
PPP1CA-203ENST00000376745 CDCA7LQ96GN5 454 aa42.82■■■■■ 4.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms