RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CASZ1Q86V15 1759 aa11.86□□□□□ -0.51
TRIM39-202ENST00000376659 ITGB4P16144 1822 aa11.86□□□□□ -0.51
TRIM39-202ENST00000376659 ERBB3P21860 1342 aa11.86□□□□□ -0.51
TRIM39-202ENST00000376659 RNMTO43148 476 aaKnown RBP11.86□□□□□ -0.51
TRIM39-202ENST00000376659 XRCC6P12956 609 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRIM39-202ENST00000376659 ESYT1Q9BSJ8 1104 aa11.86□□□□□ -0.51
TRIM39-202ENST00000376659 EXOC6BQ9Y2D4 811 aa11.86□□□□□ -0.51
TRIM39-202ENST00000376659 TCHHQ07283 1943 aa11.86□□□□□ -0.51
TRIM39-202ENST00000376659 GCP02774 474 aa11.85□□□□□ -0.51
TRIM39-202ENST00000376659 KAZALD1Q96I82 304 aa11.85□□□□□ -0.51
TRIM39-202ENST00000376659 COL15A1P39059 1388 aa11.85□□□□□ -0.51
TRIM39-202ENST00000376659 TRAK2O60296 914 aa11.85□□□□□ -0.51
TRIM39-202ENST00000376659 GNAI3P08754 354 aa11.85□□□□□ -0.51
TRIM39-202ENST00000376659 CHMLP26374 656 aa11.85□□□□□ -0.51
TRIM39-202ENST00000376659 TSHZ3Q63HK5 1081 aa11.85□□□□□ -0.51
TRIM39-202ENST00000376659 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
TRIM39-202ENST00000376659 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
TRIM39-202ENST00000376659 PKP1Q13835 747 aa11.85□□□□□ -0.51
TRIM39-202ENST00000376659 TNS3Q68CZ2 1445 aa11.84□□□□□ -0.51
TRIM39-202ENST00000376659 MX1P20591 662 aa11.84□□□□□ -0.51
TRIM39-202ENST00000376659 LRRCC1Q9C099 1032 aa11.84□□□□□ -0.51
TRIM39-202ENST00000376659 PALD1Q9ULE6 856 aa11.84□□□□□ -0.51
TRIM39-202ENST00000376659 EPB41L2O43491 1005 aaKnown RBP11.84□□□□□ -0.51
TRIM39-202ENST00000376659 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
TRIM39-202ENST00000376659 SSFA2P28290 1259 aa11.84□□□□□ -0.51
TRIM39-202ENST00000376659 CUL4AQ13619 759 aa11.84□□□□□ -0.51
TRIM39-202ENST00000376659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.84□□□□□ -0.51
TRIM39-202ENST00000376659 DDX11L8A8MPP1 907 aa11.83□□□□□ -0.51
TRIM39-202ENST00000376659 PROSER3Q2NL68 480 aa11.83□□□□□ -0.51
TRIM39-202ENST00000376659 GAS2L3Q86XJ1 694 aa11.83□□□□□ -0.51
TRIM39-202ENST00000376659 RREB1Q92766 1687 aa11.83□□□□□ -0.52
TRIM39-202ENST00000376659 CPDO75976 1380 aa11.83□□□□□ -0.52
TRIM39-202ENST00000376659 TMEM94Q12767 1356 aa11.83□□□□□ -0.52
TRIM39-202ENST00000376659 NWD2Q9ULI1 1742 aa11.83□□□□□ -0.52
TRIM39-202ENST00000376659 HMMRO75330 724 aa11.83□□□□□ -0.52
TRIM39-202ENST00000376659 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
TRIM39-202ENST00000376659 ERC2O15083 957 aa11.83□□□□□ -0.52
TRIM39-202ENST00000376659 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
TRIM39-202ENST00000376659 FKBP5Q13451 457 aaPredicted RBP11.83□□□□□ -0.52
TRIM39-202ENST00000376659 ARAP2Q8WZ64 1704 aa11.83□□□□□ -0.52
TRIM39-202ENST00000376659 SPEF2Q9C093 1822 aa11.83□□□□□ -0.52
TRIM39-202ENST00000376659 HDGFL1Q5TGJ6 251 aa11.82□□□□□ -0.52
TRIM39-202ENST00000376659 STK31Q9BXU1 1019 aa11.82□□□□□ -0.52
TRIM39-202ENST00000376659 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
TRIM39-202ENST00000376659 SNRKQ9NRH2 765 aa11.82□□□□□ -0.52
TRIM39-202ENST00000376659 TNS2Q63HR2 1409 aa11.82□□□□□ -0.52
TRIM39-202ENST00000376659 ESCO1Q5FWF5 840 aa11.81□□□□□ -0.52
TRIM39-202ENST00000376659 KCNB2Q92953 911 aa11.81□□□□□ -0.52
TRIM39-202ENST00000376659 RPAP1Q9BWH6 1393 aaPredicted RBP11.81□□□□□ -0.52
TRIM39-202ENST00000376659 ANKRD24Q8TF21 1146 aa11.81□□□□□ -0.52
TRIM39-202ENST00000376659 PANK2Q9BZ23 570 aa11.81□□□□□ -0.52
TRIM39-202ENST00000376659 AMOTQ4VCS5 1084 aa11.81□□□□□ -0.52
TRIM39-202ENST00000376659 ZGPATQ8N5A5 531 aaKnown RBP11.81□□□□□ -0.52
TRIM39-202ENST00000376659 COL22A1Q8NFW1 1626 aaPredicted RBP11.81□□□□□ -0.52
TRIM39-202ENST00000376659 A0A1B0GUL6 1792 aa11.8□□□□□ -0.52
TRIM39-202ENST00000376659 COL16A1Q07092 1604 aaPredicted RBP11.8□□□□□ -0.52
TRIM39-202ENST00000376659 BAG4O95429 457 aaKnown RBP11.8□□□□□ -0.52
TRIM39-202ENST00000376659 PPP1R42Q7Z4L9 355 aa11.8□□□□□ -0.52
TRIM39-202ENST00000376659 NECTIN2Q92692 538 aa11.8□□□□□ -0.52
TRIM39-202ENST00000376659 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
TRIM39-202ENST00000376659 ANAPC15P60006 121 aa11.8□□□□□ -0.52
TRIM39-202ENST00000376659 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
TRIM39-202ENST00000376659 SRCIN1Q9C0H9 1055 aa11.8□□□□□ -0.52
TRIM39-202ENST00000376659 TTC14Q96N46 770 aa11.8□□□□□ -0.52
TRIM39-202ENST00000376659 LMBRD1Q9NUN5 540 aa11.8□□□□□ -0.52
TRIM39-202ENST00000376659 PHLPP1O60346 1717 aa11.79□□□□□ -0.52
TRIM39-202ENST00000376659 LRP6O75581 1613 aa11.79□□□□□ -0.52
TRIM39-202ENST00000376659 MYH7P12883 1935 aa11.79□□□□□ -0.52
TRIM39-202ENST00000376659 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
TRIM39-202ENST00000376659 DNAAF4Q8WXU2 420 aa11.79□□□□□ -0.52
TRIM39-202ENST00000376659 LSG1Q9H089 658 aaKnown RBP11.79□□□□□ -0.52
TRIM39-202ENST00000376659 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
TRIM39-202ENST00000376659 LRP5O75197 1615 aa11.79□□□□□ -0.52
TRIM39-202ENST00000376659 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
TRIM39-202ENST00000376659 HSPA4P34932 840 aa11.79□□□□□ -0.52
TRIM39-202ENST00000376659 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
TRIM39-202ENST00000376659 RRAGDQ9NQL2 400 aaPredicted RBP11.78□□□□□ -0.52
TRIM39-202ENST00000376659 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
TRIM39-202ENST00000376659 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
TRIM39-202ENST00000376659 GLIPR1L2Q4G1C9 344 aa11.78□□□□□ -0.52
TRIM39-202ENST00000376659 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
TRIM39-202ENST00000376659 RHPN1Q8TCX5 695 aa11.78□□□□□ -0.52
TRIM39-202ENST00000376659 ISY1Q9ULR0 285 aaKnown RBP11.78□□□□□ -0.52
TRIM39-202ENST00000376659 RAD50Q92878 1312 aa11.78□□□□□ -0.52
TRIM39-202ENST00000376659 MYH3P11055 1940 aa11.78□□□□□ -0.52
TRIM39-202ENST00000376659 REC8O95072 547 aa11.78□□□□□ -0.52
TRIM39-202ENST00000376659 UBTFL1P0CB47 393 aaPredicted RBP11.78□□□□□ -0.52
TRIM39-202ENST00000376659 ZNF530Q6P9A1 599 aaPredicted RBP11.78□□□□□ -0.52
TRIM39-202ENST00000376659 LAMB2P55268 1798 aa11.77□□□□□ -0.52
TRIM39-202ENST00000376659 COL5A2P05997 1499 aaPredicted RBP11.77□□□□□ -0.52
TRIM39-202ENST00000376659 PSME1Q06323 249 aa11.77□□□□□ -0.52
TRIM39-202ENST00000376659 IGKV5-2P06315 115 aa11.77□□□□□ -0.53
TRIM39-202ENST00000376659 NRAPQ86VF7 1730 aa11.77□□□□□ -0.53
TRIM39-202ENST00000376659 A0A0U1RQG5 324 aaPredicted RBP11.77□□□□□ -0.53
TRIM39-202ENST00000376659 KLHL40Q2TBA0 621 aa11.77□□□□□ -0.53
TRIM39-202ENST00000376659 NPHP3Q7Z494 1330 aa11.76□□□□□ -0.53
TRIM39-202ENST00000376659 APBB1O00213 710 aa11.76□□□□□ -0.53
TRIM39-202ENST00000376659 SGSM2O43147 1006 aa11.76□□□□□ -0.53
TRIM39-202ENST00000376659 ALDH1L1O75891 902 aa11.76□□□□□ -0.53
TRIM39-202ENST00000376659 PLEKHO1Q53GL0 409 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms