RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 C4AP0C0L4 1744 aa21.03■□□□□ 0.96
C11orf88-202ENST00000375618 LMOD3Q0VAK6 560 aa21.01■□□□□ 0.95
C11orf88-202ENST00000375618 USP16Q9Y5T5 823 aa21.01■□□□□ 0.95
C11orf88-202ENST00000375618 SOS1Q07889 1333 aaPredicted RBP21.01■□□□□ 0.95
C11orf88-202ENST00000375618 EIF4A1P60842 406 aaKnown RBP21■□□□□ 0.95
C11orf88-202ENST00000375618 TRAPPC3LQ5T215 181 aa21■□□□□ 0.95
C11orf88-202ENST00000375618 SRP68Q9UHB9 627 aaKnown RBP20.99■□□□□ 0.95
C11orf88-202ENST00000375618 A1BGP04217 495 aa20.98■□□□□ 0.95
C11orf88-202ENST00000375618 ADRA2BP18089 450 aa20.98■□□□□ 0.95
C11orf88-202ENST00000375618 STARD3NLO95772 234 aa20.97■□□□□ 0.95
C11orf88-202ENST00000375618 SNRPA1P09661 255 aaKnown RBP20.97■□□□□ 0.95
C11orf88-202ENST00000375618 CANXP27824 592 aaKnown RBP20.97■□□□□ 0.95
C11orf88-202ENST00000375618 PIP4K2AP48426 406 aaPredicted RBP20.97■□□□□ 0.95
C11orf88-202ENST00000375618 PPP1R1BQ9UD71 204 aaPredicted RBP20.97■□□□□ 0.95
C11orf88-202ENST00000375618 ARXQ96QS3 562 aa20.96■□□□□ 0.95
C11orf88-202ENST00000375618 TSPYL4Q9UJ04 414 aa20.96■□□□□ 0.95
C11orf88-202ENST00000375618 CHL1O00533 1208 aa20.95■□□□□ 0.94
C11orf88-202ENST00000375618 GIGYF1O75420 1035 aaPredicted RBP20.95■□□□□ 0.94
C11orf88-202ENST00000375618 GYS1P13807 737 aa20.95■□□□□ 0.94
C11orf88-202ENST00000375618 FAM9BQ8IZU0 186 aa20.95■□□□□ 0.94
C11orf88-202ENST00000375618 TEX13AQ9BXU3 409 aaPredicted RBP20.95■□□□□ 0.94
C11orf88-202ENST00000375618 USP42Q9H9J4 1324 aaKnown RBP20.95■□□□□ 0.94
C11orf88-202ENST00000375618 COL15A1P39059 1388 aa20.95■□□□□ 0.94
C11orf88-202ENST00000375618 NBPF26B4DH59 902 aa20.94■□□□□ 0.94
C11orf88-202ENST00000375618 RFC4P35249 363 aa20.94■□□□□ 0.94
C11orf88-202ENST00000375618 EIF5P55010 431 aaKnown RBP20.94■□□□□ 0.94
C11orf88-202ENST00000375618 NBPF10Q6P3W6 841 aaKnown RBP20.94■□□□□ 0.94
C11orf88-202ENST00000375618 NBPF15Q8N660 670 aa20.94■□□□□ 0.94
C11orf88-202ENST00000375618 LAMB4A4D0S4 1761 aa20.94■□□□□ 0.94
C11orf88-202ENST00000375618 KRT24Q2M2I5 525 aa20.93■□□□□ 0.94
C11orf88-202ENST00000375618 FHDC1Q9C0D6 1143 aaPredicted RBP20.93■□□□□ 0.94
C11orf88-202ENST00000375618 LAS1LQ9Y4W2 734 aaKnown RBP20.93■□□□□ 0.94
C11orf88-202ENST00000375618 POLD1P28340 1107 aa20.92■□□□□ 0.94
C11orf88-202ENST00000375618 BCL2L12Q9HB09 334 aa20.92■□□□□ 0.94
C11orf88-202ENST00000375618 BABAM1Q9NWV8 329 aa20.92■□□□□ 0.94
C11orf88-202ENST00000375618 ZNF853P0CG23 659 aa20.91■□□□□ 0.94
C11orf88-202ENST00000375618 FKBP8Q14318 412 aa20.91■□□□□ 0.94
C11orf88-202ENST00000375618 USPL1Q5W0Q7 1092 aa20.91■□□□□ 0.94
C11orf88-202ENST00000375618 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
C11orf88-202ENST00000375618 MMP10P09238 476 aa20.89■□□□□ 0.93
C11orf88-202ENST00000375618 IL6STP40189 918 aaPredicted RBP20.89■□□□□ 0.93
C11orf88-202ENST00000375618 WWC1Q8IX03 1113 aa20.89■□□□□ 0.93
C11orf88-202ENST00000375618 CFAP44Q96MT7 982 aa20.89■□□□□ 0.93
C11orf88-202ENST00000375618 SYT17Q9BSW7 474 aa20.89■□□□□ 0.93
C11orf88-202ENST00000375618 MBIPQ9NS73 344 aa20.89■□□□□ 0.93
C11orf88-202ENST00000375618 NARFQ9UHQ1 456 aa20.89■□□□□ 0.93
C11orf88-202ENST00000375618 ZNF330Q9Y3S2 320 aaPredicted RBP20.89■□□□□ 0.93
C11orf88-202ENST00000375618 CCDC27Q2M243 656 aa20.88■□□□□ 0.93
C11orf88-202ENST00000375618 TBC1D2BQ9UPU7 963 aa20.88■□□□□ 0.93
C11orf88-202ENST00000375618 SALL2Q9Y467 1007 aaPredicted RBP20.88■□□□□ 0.93
C11orf88-202ENST00000375618 CCER2I3L3R5 266 aa20.87■□□□□ 0.93
C11orf88-202ENST00000375618 DDR1Q08345 913 aa20.87■□□□□ 0.93
C11orf88-202ENST00000375618 MIER1Q8N108 512 aa20.87■□□□□ 0.93
C11orf88-202ENST00000375618 NLGN1Q8N2Q7 840 aa20.87■□□□□ 0.93
C11orf88-202ENST00000375618 SCN7AQ01118 1682 aa20.86■□□□□ 0.93
C11orf88-202ENST00000375618 KLHL34Q8N239 644 aa20.86■□□□□ 0.93
C11orf88-202ENST00000375618 NLGN2Q8NFZ4 835 aa20.86■□□□□ 0.93
C11orf88-202ENST00000375618 IFT57Q9NWB7 429 aa20.86■□□□□ 0.93
C11orf88-202ENST00000375618 ZPR1O75312 459 aa20.85■□□□□ 0.93
C11orf88-202ENST00000375618 CAMTA2O94983 1202 aa20.85■□□□□ 0.93
C11orf88-202ENST00000375618 TM4SF1P30408 202 aa20.84■□□□□ 0.93
C11orf88-202ENST00000375618 PDIA6Q15084 440 aa20.84■□□□□ 0.93
C11orf88-202ENST00000375618 BCORQ6W2J9 1755 aa20.83■□□□□ 0.93
C11orf88-202ENST00000375618 A0A087WZG4 1122 aa20.83■□□□□ 0.93
C11orf88-202ENST00000375618 EIF2S2P20042 333 aaKnown RBP20.83■□□□□ 0.93
C11orf88-202ENST00000375618 NFIXQ14938 502 aa20.83■□□□□ 0.93
C11orf88-202ENST00000375618 PROSER3Q2NL68 480 aa20.83■□□□□ 0.93
C11orf88-202ENST00000375618 NCBP3Q53F19 620 aaKnown RBP20.83■□□□□ 0.93
C11orf88-202ENST00000375618 LRP10Q7Z4F1 713 aa20.83■□□□□ 0.93
C11orf88-202ENST00000375618 DZIP3Q86Y13 1208 aaKnown RBP20.83■□□□□ 0.93
C11orf88-202ENST00000375618 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
C11orf88-202ENST00000375618 GNAI1P63096 354 aa20.82■□□□□ 0.92
C11orf88-202ENST00000375618 POLRMTO00411 1230 aaKnown RBP20.81■□□□□ 0.92
C11orf88-202ENST00000375618 ANXA1P04083 346 aa20.81■□□□□ 0.92
C11orf88-202ENST00000375618 MYL6BP14649 208 aa20.81■□□□□ 0.92
C11orf88-202ENST00000375618 CALD1Q05682 793 aaKnown RBP20.81■□□□□ 0.92
C11orf88-202ENST00000375618 TBC1D9BQ66K14 1250 aa20.81■□□□□ 0.92
C11orf88-202ENST00000375618 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
C11orf88-202ENST00000375618 TSR2Q969E8 191 aaKnown RBP20.81■□□□□ 0.92
C11orf88-202ENST00000375618 C8orf58Q8NAV2 365 aa20.8■□□□□ 0.92
C11orf88-202ENST00000375618 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
C11orf88-202ENST00000375618 C10orf71Q711Q0 1435 aa20.79■□□□□ 0.92
C11orf88-202ENST00000375618 DUSP27Q5VZP5 1158 aa20.79■□□□□ 0.92
C11orf88-202ENST00000375618 TTLL7Q6ZT98 887 aa20.79■□□□□ 0.92
C11orf88-202ENST00000375618 KIAA1551Q9HCM1 1747 aa20.78■□□□□ 0.92
C11orf88-202ENST00000375618 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
C11orf88-202ENST00000375618 TSPYL6Q8N831 410 aa20.78■□□□□ 0.92
C11orf88-202ENST00000375618 CD2APQ9Y5K6 639 aa20.78■□□□□ 0.92
C11orf88-202ENST00000375618 PARP3Q9Y6F1 533 aa20.78■□□□□ 0.92
C11orf88-202ENST00000375618 KIF13BQ9NQT8 1826 aa20.78■□□□□ 0.92
C11orf88-202ENST00000375618 IL16Q14005 1332 aa20.78■□□□□ 0.92
C11orf88-202ENST00000375618 ERBB4Q15303 1308 aa20.78■□□□□ 0.92
C11orf88-202ENST00000375618 ZNF521Q96K83 1311 aa20.78■□□□□ 0.92
C11orf88-202ENST00000375618 ELL2O00472 640 aaPredicted RBP20.77■□□□□ 0.92
C11orf88-202ENST00000375618 HLFQ16534 295 aa20.77■□□□□ 0.92
C11orf88-202ENST00000375618 NRXN2Q9P2S2 1712 aa20.77■□□□□ 0.92
C11orf88-202ENST00000375618 AFDNP55196 1824 aaKnown RBP20.76■□□□□ 0.91
C11orf88-202ENST00000375618 HOXB7P09629 217 aa20.75■□□□□ 0.91
C11orf88-202ENST00000375618 WDR63Q8IWG1 891 aa20.75■□□□□ 0.91
C11orf88-202ENST00000375618 CHPF2Q9P2E5 772 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms