RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 LMOD3Q0VAK6 560 aa28.66■■■□□ 2.18
NINJ1-201ENST00000375446 PNISRQ8TF01 805 aaKnown RBP28.66■■■□□ 2.18
NINJ1-201ENST00000375446 MIS18AQ9NYP9 233 aa28.66■■■□□ 2.18
NINJ1-201ENST00000375446 ZBTB1Q9Y2K1 713 aa28.66■■■□□ 2.18
NINJ1-201ENST00000375446 SOS1Q07889 1333 aaPredicted RBP28.65■■■□□ 2.18
NINJ1-201ENST00000375446 NEUROD2Q15784 382 aa28.64■■■□□ 2.18
NINJ1-201ENST00000375446 KLHL34Q8N239 644 aa28.63■■■□□ 2.17
NINJ1-201ENST00000375446 GYS1P13807 737 aa28.62■■■□□ 2.17
NINJ1-201ENST00000375446 NLGN1Q8N2Q7 840 aa28.62■■■□□ 2.17
NINJ1-201ENST00000375446 SNRPA1P09661 255 aaKnown RBP28.61■■■□□ 2.17
NINJ1-201ENST00000375446 CANXP27824 592 aaKnown RBP28.61■■■□□ 2.17
NINJ1-201ENST00000375446 SRP68Q9UHB9 627 aaKnown RBP28.61■■■□□ 2.17
NINJ1-201ENST00000375446 USP42Q9H9J4 1324 aaKnown RBP28.61■■■□□ 2.17
NINJ1-201ENST00000375446 MRS2Q9HD23 443 aa28.6■■■□□ 2.17
NINJ1-201ENST00000375446 USP16Q9Y5T5 823 aa28.59■■■□□ 2.17
NINJ1-201ENST00000375446 PRAMEF22A3QJZ6 481 aa28.58■■■□□ 2.17
NINJ1-201ENST00000375446 MMP10P09238 476 aa28.58■■■□□ 2.17
NINJ1-201ENST00000375446 TRIM35Q9UPQ4 493 aa28.58■■■□□ 2.17
NINJ1-201ENST00000375446 COL15A1P39059 1388 aa28.58■■■□□ 2.17
NINJ1-201ENST00000375446 A1BGP04217 495 aa28.57■■■□□ 2.16
NINJ1-201ENST00000375446 EIF5P55010 431 aaKnown RBP28.57■■■□□ 2.16
NINJ1-201ENST00000375446 ZPR1O75312 459 aa28.56■■■□□ 2.16
NINJ1-201ENST00000375446 C4AP0C0L4 1744 aa28.56■■■□□ 2.16
NINJ1-201ENST00000375446 APAF1O14727 1248 aa28.55■■■□□ 2.16
NINJ1-201ENST00000375446 EIF4A1P60842 406 aaKnown RBP28.55■■■□□ 2.16
NINJ1-201ENST00000375446 TSPYL4Q9UJ04 414 aa28.55■■■□□ 2.16
NINJ1-201ENST00000375446 IL6STP40189 918 aaPredicted RBP28.54■■■□□ 2.16
NINJ1-201ENST00000375446 FKBP8Q14318 412 aa28.54■■■□□ 2.16
NINJ1-201ENST00000375446 USPL1Q5W0Q7 1092 aa28.54■■■□□ 2.16
NINJ1-201ENST00000375446 BABAM1Q9NWV8 329 aa28.54■■■□□ 2.16
NINJ1-201ENST00000375446 NARFQ9UHQ1 456 aa28.54■■■□□ 2.16
NINJ1-201ENST00000375446 CD2APQ9Y5K6 639 aa28.54■■■□□ 2.16
NINJ1-201ENST00000375446 A0A087WZG4 1122 aa28.53■■■□□ 2.16
NINJ1-201ENST00000375446 DCAF8L1A6NGE4 600 aa28.53■■■□□ 2.16
NINJ1-201ENST00000375446 KDM3BQ7LBC6 1761 aa28.52■■■□□ 2.16
NINJ1-201ENST00000375446 NLGN2Q8NFZ4 835 aa28.52■■■□□ 2.16
NINJ1-201ENST00000375446 ZNF330Q9Y3S2 320 aaPredicted RBP28.52■■■□□ 2.16
NINJ1-201ENST00000375446 GIGYF1O75420 1035 aaPredicted RBP28.51■■■□□ 2.15
NINJ1-201ENST00000375446 PIP4K2AP48426 406 aaPredicted RBP28.49■■■□□ 2.15
NINJ1-201ENST00000375446 NPM2Q86SE8 214 aaKnown RBP28.49■■■□□ 2.15
NINJ1-201ENST00000375446 PARP3Q9Y6F1 533 aa28.49■■■□□ 2.15
NINJ1-201ENST00000375446 BCL2L12Q9HB09 334 aa28.48■■■□□ 2.15
NINJ1-201ENST00000375446 CHL1O00533 1208 aa28.47■■■□□ 2.15
NINJ1-201ENST00000375446 NBPF26B4DH59 902 aa28.46■■■□□ 2.15
NINJ1-201ENST00000375446 TM4SF1P30408 202 aa28.46■■■□□ 2.15
NINJ1-201ENST00000375446 DDR1Q08345 913 aa28.46■■■□□ 2.15
NINJ1-201ENST00000375446 NBPF10Q6P3W6 841 aaKnown RBP28.46■■■□□ 2.15
NINJ1-201ENST00000375446 NBPF15Q8N660 670 aa28.46■■■□□ 2.15
NINJ1-201ENST00000375446 TBC1D2BQ9UPU7 963 aa28.46■■■□□ 2.15
NINJ1-201ENST00000375446 LAS1LQ9Y4W2 734 aaKnown RBP28.46■■■□□ 2.15
NINJ1-201ENST00000375446 NFIXQ14938 502 aa28.43■■■□□ 2.14
NINJ1-201ENST00000375446 DZIP3Q86Y13 1208 aaKnown RBP28.42■■■□□ 2.14
NINJ1-201ENST00000375446 POLRMTO00411 1230 aaKnown RBP28.41■■■□□ 2.14
NINJ1-201ENST00000375446 CAMTA2O94983 1202 aa28.41■■■□□ 2.14
NINJ1-201ENST00000375446 CALD1Q05682 793 aaKnown RBP28.41■■■□□ 2.14
NINJ1-201ENST00000375446 CFAP44Q96MT7 982 aa28.41■■■□□ 2.14
NINJ1-201ENST00000375446 GPR162Q16538 588 aa28.4■■■□□ 2.14
NINJ1-201ENST00000375446 C10orf71Q711Q0 1435 aa28.4■■■□□ 2.14
NINJ1-201ENST00000375446 LAMB4A4D0S4 1761 aa28.39■■■□□ 2.14
NINJ1-201ENST00000375446 PELP1Q8IZL8 1130 aaKnown RBP28.39■■■□□ 2.14
NINJ1-201ENST00000375446 SENP3-EIF4A1A0A087X0R7 540 aa28.37■■■□□ 2.13
NINJ1-201ENST00000375446 ZNF853P0CG23 659 aa28.37■■■□□ 2.13
NINJ1-201ENST00000375446 BICDL1Q6ZP65 573 aa28.37■■■□□ 2.13
NINJ1-201ENST00000375446 IFT57Q9NWB7 429 aa28.37■■■□□ 2.13
NINJ1-201ENST00000375446 TBC1D9BQ66K14 1250 aa28.36■■■□□ 2.13
NINJ1-201ENST00000375446 FAM9BQ8IZU0 186 aa28.36■■■□□ 2.13
NINJ1-201ENST00000375446 ERBB4Q15303 1308 aa28.36■■■□□ 2.13
NINJ1-201ENST00000375446 EIF2S2P20042 333 aaKnown RBP28.35■■■□□ 2.13
NINJ1-201ENST00000375446 TGFB2P61812 414 aa28.35■■■□□ 2.13
NINJ1-201ENST00000375446 GNAI1P63096 354 aa28.35■■■□□ 2.13
NINJ1-201ENST00000375446 CCDC27Q2M243 656 aa28.35■■■□□ 2.13
NINJ1-201ENST00000375446 KRT24Q2M2I5 525 aa28.35■■■□□ 2.13
NINJ1-201ENST00000375446 MBIPQ9NS73 344 aa28.35■■■□□ 2.13
NINJ1-201ENST00000375446 SCN7AQ01118 1682 aa28.35■■■□□ 2.13
NINJ1-201ENST00000375446 SERPINB2P05120 415 aa28.34■■■□□ 2.13
NINJ1-201ENST00000375446 MYL6BP14649 208 aa28.34■■■□□ 2.13
NINJ1-201ENST00000375446 NGEFQ8N5V2 710 aa28.34■■■□□ 2.13
NINJ1-201ENST00000375446 PXDNLA1KZ92 1463 aa28.33■■■□□ 2.13
NINJ1-201ENST00000375446 YBX3P16989 372 aaKnown RBP eCLIP28.32■■■□□ 2.121e-7■■□□□ 13.3
NINJ1-201ENST00000375446 NCBP3Q53F19 620 aaKnown RBP28.32■■■□□ 2.12
NINJ1-201ENST00000375446 CLEC4GQ6UXB4 293 aa28.32■■■□□ 2.12
NINJ1-201ENST00000375446 WWC1Q8IX03 1113 aa28.32■■■□□ 2.12
NINJ1-201ENST00000375446 ZNF652Q9Y2D9 606 aa28.32■■■□□ 2.12
NINJ1-201ENST00000375446 A0A0G2JLW4 131 aa28.31■■■□□ 2.12
NINJ1-201ENST00000375446 RGL2O15211 777 aa28.31■■■□□ 2.12
NINJ1-201ENST00000375446 KIF13BQ9NQT8 1826 aa28.31■■■□□ 2.12
NINJ1-201ENST00000375446 PDIA6Q15084 440 aa28.3■■■□□ 2.12
NINJ1-201ENST00000375446 NECTIN2Q92692 538 aa28.3■■■□□ 2.12
NINJ1-201ENST00000375446 SETDB2Q96T68 719 aa28.3■■■□□ 2.12
NINJ1-201ENST00000375446 WWC3Q9ULE0 1092 aa28.3■■■□□ 2.12
NINJ1-201ENST00000375446 CARMIL3Q8ND23 1372 aa28.29■■■□□ 2.12
NINJ1-201ENST00000375446 HOXB7P09629 217 aa28.29■■■□□ 2.12
NINJ1-201ENST00000375446 DPEP1P16444 411 aa28.29■■■□□ 2.12
NINJ1-201ENST00000375446 KIF6Q6ZMV9 814 aa28.28■■■□□ 2.12
NINJ1-201ENST00000375446 TTLL7Q6ZT98 887 aa28.28■■■□□ 2.12
NINJ1-201ENST00000375446 BCORQ6W2J9 1755 aa28.27■■■□□ 2.12
NINJ1-201ENST00000375446 GRIN3BO60391 1043 aa28.27■■■□□ 2.12
NINJ1-201ENST00000375446 PROSER3Q2NL68 480 aa28.27■■■□□ 2.12
NINJ1-201ENST00000375446 DUSP27Q5VZP5 1158 aa28.27■■■□□ 2.12
NINJ1-201ENST00000375446 LRP10Q7Z4F1 713 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms