RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 KRT24Q2M2I5 525 aa28.26■■■□□ 2.12
XPA-201ENST00000375128 SPINK5Q9NQ38 1064 aaPredicted RBP28.26■■■□□ 2.11
XPA-201ENST00000375128 CCDC87Q9NVE4 849 aa28.26■■■□□ 2.11
XPA-201ENST00000375128 TUBGCP6Q96RT7 1819 aa28.25■■■□□ 2.11
XPA-201ENST00000375128 GOLGA2Q08379 1002 aa28.25■■■□□ 2.11
XPA-201ENST00000375128 INTS5Q6P9B9 1019 aaKnown RBP28.25■■■□□ 2.11
XPA-201ENST00000375128 PHF14O94880 888 aa28.24■■■□□ 2.11
XPA-201ENST00000375128 UBR3Q6ZT12 1888 aa28.23■■■□□ 2.11
XPA-201ENST00000375128 SMIM5Q71RC9 77 aa28.23■■■□□ 2.11
XPA-201ENST00000375128 RTCBQ9Y3I0 505 aaKnown RBP28.23■■■□□ 2.11
XPA-201ENST00000375128 LAMB4A4D0S4 1761 aa28.22■■■□□ 2.11
XPA-201ENST00000375128 A1BGP04217 495 aa28.22■■■□□ 2.11
XPA-201ENST00000375128 CANXP27824 592 aaKnown RBP28.22■■■□□ 2.11
XPA-201ENST00000375128 MYH16Q9H6N6 1097 aa28.22■■■□□ 2.11
XPA-201ENST00000375128 ZBTB1Q9Y2K1 713 aa28.22■■■□□ 2.11
XPA-201ENST00000375128 PNPLA7Q6ZV29 1317 aa28.21■■■□□ 2.11
XPA-201ENST00000375128 FANCIQ9NVI1 1328 aa28.21■■■□□ 2.11
XPA-201ENST00000375128 ELL2O00472 640 aaPredicted RBP28.21■■■□□ 2.11
XPA-201ENST00000375128 RPS6KA4O75676 772 aa28.21■■■□□ 2.11
XPA-201ENST00000375128 EIF2S2P20042 333 aaKnown RBP28.21■■■□□ 2.11
XPA-201ENST00000375128 MSH5O43196 834 aa28.2■■■□□ 2.11
XPA-201ENST00000375128 AMIGO3Q86WK7 504 aa28.2■■■□□ 2.11
XPA-201ENST00000375128 QSER1Q2KHR3 1735 aa28.2■■■□□ 2.1
XPA-201ENST00000375128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.19■■■□□ 2.1
XPA-201ENST00000375128 DUSP27Q5VZP5 1158 aa28.19■■■□□ 2.1
XPA-201ENST00000375128 SSFA2P28290 1259 aa28.18■■■□□ 2.1
XPA-201ENST00000375128 PIP4K2AP48426 406 aaPredicted RBP28.18■■■□□ 2.1
XPA-201ENST00000375128 TRAPPC3LQ5T215 181 aa28.18■■■□□ 2.1
XPA-201ENST00000375128 C8orf58Q8NAV2 365 aa28.18■■■□□ 2.1
XPA-201ENST00000375128 FLAD1Q8NFF5 587 aa28.18■■■□□ 2.1
XPA-201ENST00000375128 PDGFDQ9GZP0 370 aaPredicted RBP28.18■■■□□ 2.1
XPA-201ENST00000375128 E9PSI1 815 aa28.18■■■□□ 2.1
XPA-201ENST00000375128 COL23A1Q86Y22 540 aaPredicted RBP28.18■■■□□ 2.1
XPA-201ENST00000375128 NECTIN2Q92692 538 aa28.18■■■□□ 2.1
XPA-201ENST00000375128 CDCA7LQ96GN5 454 aa28.18■■■□□ 2.1
XPA-201ENST00000375128 ZNF330Q9Y3S2 320 aaPredicted RBP28.18■■■□□ 2.1
XPA-201ENST00000375128 HOXB7P09629 217 aa28.16■■■□□ 2.1
XPA-201ENST00000375128 SLFN5Q08AF3 891 aa28.16■■■□□ 2.1
XPA-201ENST00000375128 EXOSC9Q06265 439 aaKnown RBP28.15■■■□□ 2.1
XPA-201ENST00000375128 NPM2Q86SE8 214 aaKnown RBP28.15■■■□□ 2.1
XPA-201ENST00000375128 TSPYL6Q8N831 410 aa28.15■■■□□ 2.1
XPA-201ENST00000375128 SOS1Q07889 1333 aaPredicted RBP28.15■■■□□ 2.1
XPA-201ENST00000375128 HDGFL1Q5TGJ6 251 aa28.14■■■□□ 2.1
XPA-201ENST00000375128 ARHGEF1Q92888 912 aaKnown RBP28.14■■■□□ 2.1
XPA-201ENST00000375128 ADRA2BP18089 450 aa28.13■■■□□ 2.09
XPA-201ENST00000375128 IL6STP40189 918 aaPredicted RBP28.13■■■□□ 2.09
XPA-201ENST00000375128 NBPF26B4DH59 902 aa28.12■■■□□ 2.09
XPA-201ENST00000375128 RFC4P35249 363 aa28.12■■■□□ 2.09
XPA-201ENST00000375128 TWISTNBQ3B726 338 aaPredicted RBP28.12■■■□□ 2.09
XPA-201ENST00000375128 NBPF10Q6P3W6 841 aaKnown RBP28.12■■■□□ 2.09
XPA-201ENST00000375128 NBPF15Q8N660 670 aa28.12■■■□□ 2.09
XPA-201ENST00000375128 CASZ1Q86V15 1759 aa28.12■■■□□ 2.09
XPA-201ENST00000375128 MYL6BP14649 208 aa28.11■■■□□ 2.09
XPA-201ENST00000375128 EIF5P55010 431 aaKnown RBP28.11■■■□□ 2.09
XPA-201ENST00000375128 ARXQ96QS3 562 aa28.11■■■□□ 2.09
XPA-201ENST00000375128 ZBED9Q6R2W3 1325 aa28.11■■■□□ 2.09
XPA-201ENST00000375128 COL15A1P39059 1388 aa28.11■■■□□ 2.09
XPA-201ENST00000375128 ERBB4Q15303 1308 aa28.09■■■□□ 2.09
XPA-201ENST00000375128 ZBTB7AO95365 584 aa28.09■■■□□ 2.09
XPA-201ENST00000375128 C4AP0C0L4 1744 aa28.08■■■□□ 2.09
XPA-201ENST00000375128 A0A087WZG4 1122 aa28.08■■■□□ 2.09
XPA-201ENST00000375128 ANXA1P04083 346 aa28.07■■■□□ 2.08
XPA-201ENST00000375128 SLC16A10Q8TF71 515 aa28.07■■■□□ 2.08
XPA-201ENST00000375128 CHMP4AQ9BY43 222 aa28.07■■■□□ 2.08
XPA-201ENST00000375128 CHPF2Q9P2E5 772 aa28.07■■■□□ 2.08
XPA-201ENST00000375128 ZPR1O75312 459 aa28.06■■■□□ 2.08
XPA-201ENST00000375128 PDIA6Q15084 440 aa28.06■■■□□ 2.08
XPA-201ENST00000375128 TRMT2AQ8IZ69 625 aaKnown RBP28.06■■■□□ 2.08
XPA-201ENST00000375128 YTHDC1Q96MU7 727 aaKnown RBP28.06■■■□□ 2.08
XPA-201ENST00000375128 SRP68Q9UHB9 627 aaKnown RBP28.06■■■□□ 2.08
XPA-201ENST00000375128 TBC1D2BQ9UPU7 963 aa28.06■■■□□ 2.08
XPA-201ENST00000375128 VAMP4O75379 141 aa28.05■■■□□ 2.08
XPA-201ENST00000375128 PROSER3Q2NL68 480 aa28.05■■■□□ 2.08
XPA-201ENST00000375128 CCDC30Q5VVM6 783 aa28.05■■■□□ 2.08
XPA-201ENST00000375128 DDX21Q9NR30 783 aaKnown RBP eCLIP28.05■■■□□ 2.08
XPA-201ENST00000375128 DBF4Q9UBU7 674 aaPredicted RBP28.05■■■□□ 2.08
XPA-201ENST00000375128 ATF5Q9Y2D1 282 aaPredicted RBP28.05■■■□□ 2.08
XPA-201ENST00000375128 MTFR1LQ9H019 292 aa28.04■■■□□ 2.08
XPA-201ENST00000375128 NARFQ9UHQ1 456 aa28.04■■■□□ 2.08
XPA-201ENST00000375128 TCERG1O14776 1098 aaKnown RBP28.03■■■□□ 2.08
XPA-201ENST00000375128 USPL1Q5W0Q7 1092 aa28.03■■■□□ 2.08
XPA-201ENST00000375128 MSL1Q68DK7 614 aa28.03■■■□□ 2.08
XPA-201ENST00000375128 DZIP3Q86Y13 1208 aaKnown RBP28.03■■■□□ 2.08
XPA-201ENST00000375128 USP42Q9H9J4 1324 aaKnown RBP28.02■■■□□ 2.08
XPA-201ENST00000375128 STK31Q9BXU1 1019 aa28.01■■■□□ 2.07
XPA-201ENST00000375128 GYS1P13807 737 aa28■■■□□ 2.07
XPA-201ENST00000375128 AIMP1Q12904 312 aaKnown RBP28■■■□□ 2.07
XPA-201ENST00000375128 SPON1Q9HCB6 807 aa28■■■□□ 2.07
XPA-201ENST00000375128 HYPKQ9NX55 129 aa27.99■■■□□ 2.07
XPA-201ENST00000375128 KIF6Q6ZMV9 814 aa27.98■■■□□ 2.07
XPA-201ENST00000375128 TTLL7Q6ZT98 887 aa27.98■■■□□ 2.07
XPA-201ENST00000375128 LRP10Q7Z4F1 713 aa27.98■■■□□ 2.07
XPA-201ENST00000375128 COPS6Q7L5N1 327 aa27.97■■■□□ 2.07
XPA-201ENST00000375128 NLGN1Q8N2Q7 840 aa27.97■■■□□ 2.07
XPA-201ENST00000375128 XAGE3Q8WTP9 111 aa27.97■■■□□ 2.07
XPA-201ENST00000375128 CAMTA2O94983 1202 aa27.96■■■□□ 2.07
XPA-201ENST00000375128 FKBP8Q14318 412 aa27.96■■■□□ 2.07
XPA-201ENST00000375128 SLC4A2P04920 1241 aa27.95■■■□□ 2.07
XPA-201ENST00000375128 BCL2L12Q9HB09 334 aa27.95■■■□□ 2.07
XPA-201ENST00000375128 POLD1P28340 1107 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms