RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 PHF20L1A8MW92 1017 aa3.59□□□□□ -1.83
CCDC7-204ENST00000375025 ADH1AP07327 375 aa3.59□□□□□ -1.83
CCDC7-204ENST00000375025 RNF144AP50876 292 aaPredicted RBP3.59□□□□□ -1.83
CCDC7-204ENST00000375025 HELBQ8NG08 1087 aaPredicted RBP3.59□□□□□ -1.83
CCDC7-204ENST00000375025 MBIPQ9NS73 344 aa3.59□□□□□ -1.83
CCDC7-204ENST00000375025 CUEDC1Q9NWM3 386 aaPredicted RBP3.59□□□□□ -1.83
CCDC7-204ENST00000375025 CDK11AQ9UQ88 783 aaPredicted RBP3.59□□□□□ -1.83
CCDC7-204ENST00000375025 BTBD11A6QL63 1104 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 MSTNO14793 375 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 ZNF772Q68DY9 489 aaPredicted RBP3.58□□□□□ -1.84
CCDC7-204ENST00000375025 SPOCK3Q9BQ16 436 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 FKBPLQ9UIM3 349 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 A2ML1A8K2U0 1454 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 SHPRHQ149N8 1683 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 PTGIRP43119 386 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 PPP2R2DQ66LE6 453 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 ALYREFQ86V81 257 aaKnown RBP3.58□□□□□ -1.84
CCDC7-204ENST00000375025 TRIM22Q8IYM9 498 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 AK7Q96M32 723 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 ARHGAP9Q9BRR9 750 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 RSPH6AQ9H0K4 717 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 ABCC3O15438 1527 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 GOLGA3Q08378 1498 aa3.58□□□□□ -1.84
CCDC7-204ENST00000375025 GPC1P35052 558 aa3.57□□□□□ -1.84
CCDC7-204ENST00000375025 ZNF837Q96EG3 531 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-204ENST00000375025 INSM2Q96T92 566 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-204ENST00000375025 ENAMQ9NRM1 1142 aa3.57□□□□□ -1.84
CCDC7-204ENST00000375025 SPATA31A6Q5VVP1 1343 aa3.57□□□□□ -1.84
CCDC7-204ENST00000375025 MAP3K10Q02779 954 aa3.57□□□□□ -1.84
CCDC7-204ENST00000375025 SLC10A4Q96EP9 437 aa3.57□□□□□ -1.84
CCDC7-204ENST00000375025 AGBL1Q96MI9 1066 aa3.57□□□□□ -1.84
CCDC7-204ENST00000375025 ARID4BQ4LE39 1312 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-204ENST00000375025 MAGEB6P1A0A0J9YX57 407 aa3.57□□□□□ -1.84
CCDC7-204ENST00000375025 BCRP11274 1271 aa3.57□□□□□ -1.84
CCDC7-204ENST00000375025 CLK2P49760 499 aaKnown RBP3.57□□□□□ -1.84
CCDC7-204ENST00000375025 MLH3Q9UHC1 1453 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 IGF1RP08069 1367 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 ADD1P35611 737 aaKnown RBP3.56□□□□□ -1.84
CCDC7-204ENST00000375025 SEPT12Q8IYM1 358 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 ZMYND15Q9H091 742 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 DIP2CQ9Y2E4 1556 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 BCL9LQ86UU0 1499 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 ARHGAP23Q9P227 1491 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 ATAD2Q6PL18 1390 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 JCADQ9P266 1359 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 DNMT1P26358 1616 aaKnown RBP3.56□□□□□ -1.84
CCDC7-204ENST00000375025 UNC13BO14795 1591 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 PTK2Q05397 1052 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 LYSMD3Q7Z3D4 306 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 BEND7Q8N7W2 519 aaPredicted RBP3.56□□□□□ -1.84
CCDC7-204ENST00000375025 SPHKAPQ2M3C7 1700 aa3.56□□□□□ -1.84
CCDC7-204ENST00000375025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 CDC14CA4D256 554 aa3.55□□□□□ -1.84
CCDC7-204ENST00000375025 BRPF1P55201 1214 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 WDR44Q5JSH3 913 aa3.55□□□□□ -1.84
CCDC7-204ENST00000375025 ZNF784Q8NCA9 323 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 ACDQ96AP0 544 aa3.55□□□□□ -1.84
CCDC7-204ENST00000375025 CNTNAP5Q8WYK1 1306 aa3.55□□□□□ -1.84
CCDC7-204ENST00000375025 NUTM2BA6NNL0 878 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 NUTM2EB1AL46 878 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 HSP90B1P14625 803 aaKnown RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 CDK11BP21127 795 aaKnown RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 RELBQ01201 579 aa3.55□□□□□ -1.84
CCDC7-204ENST00000375025 CTDSPL2Q05D32 466 aa3.55□□□□□ -1.84
CCDC7-204ENST00000375025 NBPF20Q3BBV1 942 aa3.55□□□□□ -1.84
CCDC7-204ENST00000375025 NUTM2DQ5VT03 806 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 NUTM2AQ8IVF1 878 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 TRIM52Q96A61 297 aa3.55□□□□□ -1.84
CCDC7-204ENST00000375025 CARD14Q9BXL6 1004 aa3.55□□□□□ -1.84
CCDC7-204ENST00000375025 POLMQ9NP87 494 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 AHDC1Q5TGY3 1603 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-204ENST00000375025 ATP7AQ04656 1500 aa3.54□□□□□ -1.84
CCDC7-204ENST00000375025 COL16A1Q07092 1604 aaPredicted RBP3.54□□□□□ -1.84
CCDC7-204ENST00000375025 SPATA31C2B4DYI2 1134 aa3.54□□□□□ -1.84
CCDC7-204ENST00000375025 PDIA4P13667 645 aaKnown RBP3.54□□□□□ -1.84
CCDC7-204ENST00000375025 PDE4DQ08499 809 aa3.54□□□□□ -1.84
CCDC7-204ENST00000375025 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
CCDC7-204ENST00000375025 DYRK1BQ9Y463 629 aa3.54□□□□□ -1.84
CCDC7-204ENST00000375025 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
CCDC7-204ENST00000375025 DBN1Q16643 649 aa3.54□□□□□ -1.84
CCDC7-204ENST00000375025 CSPP1Q1MSJ5 1256 aa3.54□□□□□ -1.84
CCDC7-204ENST00000375025 ADAM32Q8TC27 787 aa3.54□□□□□ -1.84
CCDC7-204ENST00000375025 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.54□□□□□ -1.84
CCDC7-204ENST00000375025 TMPRSS4Q9NRS4 437 aa3.54□□□□□ -1.84
CCDC7-204ENST00000375025 SUPT6HQ7KZ85 1726 aaKnown RBP3.53□□□□□ -1.84
CCDC7-204ENST00000375025 XIRP1Q702N8 1843 aaKnown RBP3.53□□□□□ -1.84
CCDC7-204ENST00000375025 ZC3H13Q5T200 1668 aaKnown RBP3.53□□□□□ -1.84
CCDC7-204ENST00000375025 ERVH48-1M5A8F1 160 aa3.53□□□□□ -1.84
CCDC7-204ENST00000375025 OIP5O43482 229 aa3.53□□□□□ -1.84
CCDC7-204ENST00000375025 FBXO31Q5XUX0 539 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-204ENST00000375025 STRCP1A6NGW2 1772 aa3.53□□□□□ -1.84
CCDC7-204ENST00000375025 ZNF518AQ6AHZ1 1483 aa3.53□□□□□ -1.84
CCDC7-204ENST00000375025 K7ELQ4 463 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-204ENST00000375025 ZBTB33Q86T24 672 aa3.53□□□□□ -1.84
CCDC7-204ENST00000375025 LRRN4Q8WUT4 740 aa3.53□□□□□ -1.84
CCDC7-204ENST00000375025 ZNF395Q9H8N7 513 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-204ENST00000375025 IQGAP1P46940 1657 aa3.53□□□□□ -1.84
CCDC7-204ENST00000375025 RGS12O14924 1447 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 NCOA3Q9Y6Q9 1424 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 HOXB4P17483 251 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms