RNA–Protein interactions for RNA: ENST00000374738.3

PGAP1-202, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 5

Gene PGAP1, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-202ENST00000374738 TJP1Q07157 1748 aa28.53■■■□□ 2.16
PGAP1-202ENST00000374738 MBIPQ9NS73 344 aa28.53■■■□□ 2.16
PGAP1-202ENST00000374738 USP16Q9Y5T5 823 aa28.53■■■□□ 2.16
PGAP1-202ENST00000374738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.52■■■□□ 2.16
PGAP1-202ENST00000374738 TRAPPC3LQ5T215 181 aa28.52■■■□□ 2.16
PGAP1-202ENST00000374738 COL5A3P25940 1745 aaPredicted RBP28.52■■■□□ 2.16
PGAP1-202ENST00000374738 QSER1Q2KHR3 1735 aa28.52■■■□□ 2.16
PGAP1-202ENST00000374738 COL23A1Q86Y22 540 aaPredicted RBP28.51■■■□□ 2.15
PGAP1-202ENST00000374738 SOS1Q07889 1333 aaPredicted RBP28.5■■■□□ 2.15
PGAP1-202ENST00000374738 IL6STP40189 918 aaPredicted RBP28.49■■■□□ 2.15
PGAP1-202ENST00000374738 CHMP4AQ9BY43 222 aa28.49■■■□□ 2.15
PGAP1-202ENST00000374738 ERBB4Q15303 1308 aa28.48■■■□□ 2.15
PGAP1-202ENST00000374738 MTFR1LQ9H019 292 aa28.48■■■□□ 2.15
PGAP1-202ENST00000374738 ZBTB1Q9Y2K1 713 aa28.48■■■□□ 2.15
PGAP1-202ENST00000374738 SALL2Q9Y467 1007 aaPredicted RBP28.48■■■□□ 2.15
PGAP1-202ENST00000374738 EIF5P55010 431 aaKnown RBP28.47■■■□□ 2.15
PGAP1-202ENST00000374738 AMIGO3Q86WK7 504 aa28.47■■■□□ 2.15
PGAP1-202ENST00000374738 A0A087WZG4 1122 aa28.46■■■□□ 2.15
PGAP1-202ENST00000374738 PRAMEF22A3QJZ6 481 aa28.46■■■□□ 2.15
PGAP1-202ENST00000374738 ARHGEF1Q92888 912 aaKnown RBP28.46■■■□□ 2.15
PGAP1-202ENST00000374738 PDGFDQ9GZP0 370 aaPredicted RBP28.46■■■□□ 2.15
PGAP1-202ENST00000374738 A1BGP04217 495 aa28.45■■■□□ 2.14
PGAP1-202ENST00000374738 MYH16Q9H6N6 1097 aa28.45■■■□□ 2.14
PGAP1-202ENST00000374738 SPON1Q9HCB6 807 aa28.44■■■□□ 2.14
PGAP1-202ENST00000374738 CASZ1Q86V15 1759 aa28.44■■■□□ 2.14
PGAP1-202ENST00000374738 SENP3-EIF4A1A0A087X0R7 540 aa28.43■■■□□ 2.14
PGAP1-202ENST00000374738 PHF14O94880 888 aa28.43■■■□□ 2.14
PGAP1-202ENST00000374738 CANXP27824 592 aaKnown RBP28.43■■■□□ 2.14
PGAP1-202ENST00000374738 RFC4P35249 363 aa28.43■■■□□ 2.14
PGAP1-202ENST00000374738 UBR3Q6ZT12 1888 aa28.42■■■□□ 2.14
PGAP1-202ENST00000374738 MSH5O43196 834 aa28.41■■■□□ 2.14
PGAP1-202ENST00000374738 GOLGA2Q08379 1002 aa28.41■■■□□ 2.14
PGAP1-202ENST00000374738 DUSP27Q5VZP5 1158 aa28.41■■■□□ 2.14
PGAP1-202ENST00000374738 RGL2O15211 777 aa28.4■■■□□ 2.14
PGAP1-202ENST00000374738 NPM2Q86SE8 214 aaKnown RBP28.4■■■□□ 2.14
PGAP1-202ENST00000374738 MYH14Q7Z406 1995 aaKnown RBP28.4■■■□□ 2.14
PGAP1-202ENST00000374738 COL15A1P39059 1388 aa28.39■■■□□ 2.14
PGAP1-202ENST00000374738 NBPF26B4DH59 902 aa28.39■■■□□ 2.14
PGAP1-202ENST00000374738 E9PSI1 815 aa28.39■■■□□ 2.14
PGAP1-202ENST00000374738 NBPF10Q6P3W6 841 aaKnown RBP28.39■■■□□ 2.14
PGAP1-202ENST00000374738 NLGN1Q8N2Q7 840 aa28.39■■■□□ 2.14
PGAP1-202ENST00000374738 NBPF15Q8N660 670 aa28.39■■■□□ 2.14
PGAP1-202ENST00000374738 NARFQ9UHQ1 456 aa28.39■■■□□ 2.14
PGAP1-202ENST00000374738 ZBTB7AO95365 584 aa28.38■■■□□ 2.13
PGAP1-202ENST00000374738 TSR2Q969E8 191 aaKnown RBP28.38■■■□□ 2.13
PGAP1-202ENST00000374738 USP42Q9H9J4 1324 aaKnown RBP28.38■■■□□ 2.13
PGAP1-202ENST00000374738 FANCIQ9NVI1 1328 aa28.38■■■□□ 2.13
PGAP1-202ENST00000374738 KRT24Q2M2I5 525 aa28.37■■■□□ 2.13
PGAP1-202ENST00000374738 ZPR1O75312 459 aa28.36■■■□□ 2.13
PGAP1-202ENST00000374738 SMIM5Q71RC9 77 aa28.36■■■□□ 2.13
PGAP1-202ENST00000374738 C8orf58Q8NAV2 365 aa28.36■■■□□ 2.13
PGAP1-202ENST00000374738 SGIP1Q9BQI5 828 aa28.36■■■□□ 2.13
PGAP1-202ENST00000374738 SPINK5Q9NQ38 1064 aaPredicted RBP28.36■■■□□ 2.13
PGAP1-202ENST00000374738 TUBGCP6Q96RT7 1819 aa28.36■■■□□ 2.13
PGAP1-202ENST00000374738 PTGER2P43116 358 aa28.35■■■□□ 2.13
PGAP1-202ENST00000374738 PDIA6Q15084 440 aa28.35■■■□□ 2.13
PGAP1-202ENST00000374738 HDGFL1Q5TGJ6 251 aa28.35■■■□□ 2.13
PGAP1-202ENST00000374738 GYS1P13807 737 aa28.34■■■□□ 2.13
PGAP1-202ENST00000374738 EIF2S2P20042 333 aaKnown RBP28.34■■■□□ 2.13
PGAP1-202ENST00000374738 SLFN5Q08AF3 891 aa28.34■■■□□ 2.13
PGAP1-202ENST00000374738 DDX21Q9NR30 783 aaKnown RBP eCLIP28.34■■■□□ 2.13
PGAP1-202ENST00000374738 LAMB4A4D0S4 1761 aa28.34■■■□□ 2.13
PGAP1-202ENST00000374738 POLD1P28340 1107 aa28.33■■■□□ 2.13
PGAP1-202ENST00000374738 DBF4Q9UBU7 674 aaPredicted RBP28.33■■■□□ 2.13
PGAP1-202ENST00000374738 ATF5Q9Y2D1 282 aaPredicted RBP28.33■■■□□ 2.13
PGAP1-202ENST00000374738 LRP10Q7Z4F1 713 aa28.32■■■□□ 2.12
PGAP1-202ENST00000374738 TRMT2AQ8IZ69 625 aaKnown RBP28.32■■■□□ 2.12
PGAP1-202ENST00000374738 TWISTNBQ3B726 338 aaPredicted RBP28.31■■■□□ 2.12
PGAP1-202ENST00000374738 CCDC30Q5VVM6 783 aa28.31■■■□□ 2.12
PGAP1-202ENST00000374738 CLEC4GQ6UXB4 293 aa28.31■■■□□ 2.12
PGAP1-202ENST00000374738 HNRNPUQ00839 825 aaKnown RBP eCLIP28.3■■■□□ 2.12
PGAP1-202ENST00000374738 DZIP3Q86Y13 1208 aaKnown RBP28.3■■■□□ 2.12
PGAP1-202ENST00000374738 LRP5O75197 1615 aa28.29■■■□□ 2.12
PGAP1-202ENST00000374738 ERVV-1B6SEH8 477 aa28.29■■■□□ 2.12
PGAP1-202ENST00000374738 USPL1Q5W0Q7 1092 aa28.29■■■□□ 2.12
PGAP1-202ENST00000374738 TSPYL6Q8N831 410 aa28.29■■■□□ 2.12
PGAP1-202ENST00000374738 HYPKQ9NX55 129 aa28.29■■■□□ 2.12
PGAP1-202ENST00000374738 ELL2O00472 640 aaPredicted RBP28.28■■■□□ 2.12
PGAP1-202ENST00000374738 CAMTA2O94983 1202 aa28.28■■■□□ 2.12
PGAP1-202ENST00000374738 SRP68Q9UHB9 627 aaKnown RBP28.28■■■□□ 2.12
PGAP1-202ENST00000374738 COL24A1Q17RW2 1714 aa28.28■■■□□ 2.12
PGAP1-202ENST00000374738 VAMP4O75379 141 aa28.27■■■□□ 2.12
PGAP1-202ENST00000374738 PIP4K2AP48426 406 aaPredicted RBP28.27■■■□□ 2.12
PGAP1-202ENST00000374738 EXOSC9Q06265 439 aaKnown RBP28.27■■■□□ 2.12
PGAP1-202ENST00000374738 TBC1D2BQ9UPU7 963 aa28.27■■■□□ 2.12
PGAP1-202ENST00000374738 ZNF330Q9Y3S2 320 aaPredicted RBP28.27■■■□□ 2.12
PGAP1-202ENST00000374738 MYL6BP14649 208 aa28.26■■■□□ 2.11
PGAP1-202ENST00000374738 BCL2L12Q9HB09 334 aa28.26■■■□□ 2.11
PGAP1-202ENST00000374738 CHPF2Q9P2E5 772 aa28.26■■■□□ 2.11
PGAP1-202ENST00000374738 ZBED9Q6R2W3 1325 aa28.25■■■□□ 2.11
PGAP1-202ENST00000374738 TM4SF1P30408 202 aa28.25■■■□□ 2.11
PGAP1-202ENST00000374738 FKBP8Q14318 412 aa28.25■■■□□ 2.11
PGAP1-202ENST00000374738 ZNF652Q9Y2D9 606 aa28.25■■■□□ 2.11
PGAP1-202ENST00000374738 MSL1Q68DK7 614 aa28.24■■■□□ 2.11
PGAP1-202ENST00000374738 KIF6Q6ZMV9 814 aa28.24■■■□□ 2.11
PGAP1-202ENST00000374738 ZNF428Q96B54 188 aa28.24■■■□□ 2.11
PGAP1-202ENST00000374738 ARXQ96QS3 562 aa28.24■■■□□ 2.11
PGAP1-202ENST00000374738 PROSER3Q2NL68 480 aa28.23■■■□□ 2.11
PGAP1-202ENST00000374738 NECTIN2Q92692 538 aa28.23■■■□□ 2.11
PGAP1-202ENST00000374738 CDCA7LQ96GN5 454 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms