RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 E9PSI1 815 aa14.74□□□□□ -0.05
HSPG2-202ENST00000374676 SLFN5Q08AF3 891 aa14.74□□□□□ -0.05
HSPG2-202ENST00000374676 INTS5Q6P9B9 1019 aaKnown RBP14.74□□□□□ -0.05
HSPG2-202ENST00000374676 TSR2Q969E8 191 aaKnown RBP14.74□□□□□ -0.05
HSPG2-202ENST00000374676 AK7Q96M32 723 aa14.74□□□□□ -0.05
HSPG2-202ENST00000374676 CCDC87Q9NVE4 849 aa14.74□□□□□ -0.05
HSPG2-202ENST00000374676 LAMB4A4D0S4 1761 aa14.73□□□□□ -0.05
HSPG2-202ENST00000374676 SOS1Q07889 1333 aaPredicted RBP14.73□□□□□ -0.05
HSPG2-202ENST00000374676 FANCIQ9NVI1 1328 aa14.73□□□□□ -0.05
HSPG2-202ENST00000374676 RPS6KA4O75676 772 aa14.73□□□□□ -0.05
HSPG2-202ENST00000374676 FLAD1Q8NFF5 587 aa14.73□□□□□ -0.05
HSPG2-202ENST00000374676 TFCP2L1Q9NZI6 479 aa14.73□□□□□ -0.05
HSPG2-202ENST00000374676 TUBGCP6Q96RT7 1819 aa14.73□□□□□ -0.05
HSPG2-202ENST00000374676 ZBED9Q6R2W3 1325 aa14.72□□□□□ -0.05
HSPG2-202ENST00000374676 GNPATO15228 680 aa14.72□□□□□ -0.05
HSPG2-202ENST00000374676 KRT24Q2M2I5 525 aa14.72□□□□□ -0.05
HSPG2-202ENST00000374676 DUSP27Q5VZP5 1158 aa14.72□□□□□ -0.05
HSPG2-202ENST00000374676 TRMT2AQ8IZ69 625 aaKnown RBP14.72□□□□□ -0.05
HSPG2-202ENST00000374676 CHMP4AQ9BY43 222 aa14.72□□□□□ -0.05
HSPG2-202ENST00000374676 RTCBQ9Y3I0 505 aaKnown RBP14.72□□□□□ -0.05
HSPG2-202ENST00000374676 ERBB4Q15303 1308 aa14.71□□□□□ -0.05
HSPG2-202ENST00000374676 A1BGP04217 495 aa14.71□□□□□ -0.05
HSPG2-202ENST00000374676 ADRA2BP18089 450 aa14.71□□□□□ -0.05
HSPG2-202ENST00000374676 SSFA2P28290 1259 aa14.71□□□□□ -0.05
HSPG2-202ENST00000374676 R3HDM1Q15032 1099 aaKnown RBP14.71□□□□□ -0.05
HSPG2-202ENST00000374676 C8orf58Q8NAV2 365 aa14.71□□□□□ -0.05
HSPG2-202ENST00000374676 ZBTB1Q9Y2K1 713 aa14.71□□□□□ -0.05
HSPG2-202ENST00000374676 IL6STP40189 918 aaPredicted RBP14.7□□□□□ -0.06
HSPG2-202ENST00000374676 EIF5P55010 431 aaKnown RBP14.7□□□□□ -0.06
HSPG2-202ENST00000374676 TRAPPC3LQ5T215 181 aa14.7□□□□□ -0.06
HSPG2-202ENST00000374676 CDCA7LQ96GN5 454 aa14.7□□□□□ -0.06
HSPG2-202ENST00000374676 PNPLA7Q6ZV29 1317 aa14.69□□□□□ -0.06
HSPG2-202ENST00000374676 NBPF26B4DH59 902 aa14.69□□□□□ -0.06
HSPG2-202ENST00000374676 EIF2S2P20042 333 aaKnown RBP14.69□□□□□ -0.06
HSPG2-202ENST00000374676 CANXP27824 592 aaKnown RBP14.69□□□□□ -0.06
HSPG2-202ENST00000374676 EXOSC9Q06265 439 aaKnown RBP14.69□□□□□ -0.06
HSPG2-202ENST00000374676 NBPF10Q6P3W6 841 aaKnown RBP14.69□□□□□ -0.06
HSPG2-202ENST00000374676 AMIGO3Q86WK7 504 aa14.69□□□□□ -0.06
HSPG2-202ENST00000374676 NBPF15Q8N660 670 aa14.69□□□□□ -0.06
HSPG2-202ENST00000374676 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
HSPG2-202ENST00000374676 CACNA1FO60840 1977 aa14.68□□□□□ -0.06
HSPG2-202ENST00000374676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.68□□□□□ -0.06
HSPG2-202ENST00000374676 PSDA5PKW4 1024 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-202ENST00000374676 ELL2O00472 640 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-202ENST00000374676 TWISTNBQ3B726 338 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-202ENST00000374676 COL23A1Q86Y22 540 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-202ENST00000374676 SLC16A10Q8TF71 515 aa14.68□□□□□ -0.06
HSPG2-202ENST00000374676 A0A087WZG4 1122 aa14.67□□□□□ -0.06
HSPG2-202ENST00000374676 VAMP4O75379 141 aa14.67□□□□□ -0.06
HSPG2-202ENST00000374676 PDIA6Q15084 440 aa14.67□□□□□ -0.06
HSPG2-202ENST00000374676 HDGFL1Q5TGJ6 251 aa14.67□□□□□ -0.06
HSPG2-202ENST00000374676 ARHGEF1Q92888 912 aaKnown RBP14.67□□□□□ -0.06
HSPG2-202ENST00000374676 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
HSPG2-202ENST00000374676 CCDC30Q5VVM6 783 aa14.66□□□□□ -0.06
HSPG2-202ENST00000374676 SMIM5Q71RC9 77 aa14.66□□□□□ -0.06
HSPG2-202ENST00000374676 NPM2Q86SE8 214 aaKnown RBP14.66□□□□□ -0.06
HSPG2-202ENST00000374676 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
HSPG2-202ENST00000374676 COL15A1P39059 1388 aa14.65□□□□□ -0.06
HSPG2-202ENST00000374676 PHF14O94880 888 aa14.65□□□□□ -0.06
HSPG2-202ENST00000374676 RFC4P35249 363 aa14.65□□□□□ -0.06
HSPG2-202ENST00000374676 PDGFDQ9GZP0 370 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-202ENST00000374676 DBF4Q9UBU7 674 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-202ENST00000374676 PIP4K2AP48426 406 aaPredicted RBP14.64□□□□□ -0.07
HSPG2-202ENST00000374676 LRP10Q7Z4F1 713 aa14.64□□□□□ -0.07
HSPG2-202ENST00000374676 NECTIN2Q92692 538 aa14.64□□□□□ -0.07
HSPG2-202ENST00000374676 NARFQ9UHQ1 456 aa14.64□□□□□ -0.07
HSPG2-202ENST00000374676 C4AP0C0L4 1744 aa14.63□□□□□ -0.07
HSPG2-202ENST00000374676 MSH5O43196 834 aa14.63□□□□□ -0.07
HSPG2-202ENST00000374676 CT47B1P0C2W7 299 aaPredicted RBP14.63□□□□□ -0.07
HSPG2-202ENST00000374676 MYL6BP14649 208 aa14.63□□□□□ -0.07
HSPG2-202ENST00000374676 PROSER3Q2NL68 480 aa14.63□□□□□ -0.07
HSPG2-202ENST00000374676 ZNF428Q96B54 188 aa14.63□□□□□ -0.07
HSPG2-202ENST00000374676 HYPKQ9NX55 129 aa14.63□□□□□ -0.07
HSPG2-202ENST00000374676 CHPF2Q9P2E5 772 aa14.63□□□□□ -0.07
HSPG2-202ENST00000374676 RGL2O15211 777 aa14.62□□□□□ -0.07
HSPG2-202ENST00000374676 ZPR1O75312 459 aa14.62□□□□□ -0.07
HSPG2-202ENST00000374676 MTFR1LQ9H019 292 aa14.62□□□□□ -0.07
HSPG2-202ENST00000374676 ZNF330Q9Y3S2 320 aaPredicted RBP14.62□□□□□ -0.07
HSPG2-202ENST00000374676 USP42Q9H9J4 1324 aaKnown RBP14.62□□□□□ -0.07
HSPG2-202ENST00000374676 COL24A1Q17RW2 1714 aa14.61□□□□□ -0.07
HSPG2-202ENST00000374676 ANXA1P04083 346 aa14.61□□□□□ -0.07
HSPG2-202ENST00000374676 DZIP3Q86Y13 1208 aaKnown RBP14.61□□□□□ -0.07
HSPG2-202ENST00000374676 NLGN1Q8N2Q7 840 aa14.61□□□□□ -0.07
HSPG2-202ENST00000374676 STK31Q9BXU1 1019 aa14.61□□□□□ -0.07
HSPG2-202ENST00000374676 TBC1D2BQ9UPU7 963 aa14.61□□□□□ -0.07
HSPG2-202ENST00000374676 ERVV-1B6SEH8 477 aa14.6□□□□□ -0.07
HSPG2-202ENST00000374676 CAMTA2O94983 1202 aa14.6□□□□□ -0.07
HSPG2-202ENST00000374676 GYS1P13807 737 aa14.6□□□□□ -0.07
HSPG2-202ENST00000374676 USPL1Q5W0Q7 1092 aa14.6□□□□□ -0.07
HSPG2-202ENST00000374676 COPS6Q7L5N1 327 aa14.6□□□□□ -0.07
HSPG2-202ENST00000374676 SRP68Q9UHB9 627 aaKnown RBP14.6□□□□□ -0.07
HSPG2-202ENST00000374676 ZBTB7AO95365 584 aa14.59□□□□□ -0.07
HSPG2-202ENST00000374676 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
HSPG2-202ENST00000374676 CLEC4GQ6UXB4 293 aa14.59□□□□□ -0.07
HSPG2-202ENST00000374676 TTLL7Q6ZT98 887 aa14.59□□□□□ -0.07
HSPG2-202ENST00000374676 XAGE3Q8WTP9 111 aa14.59□□□□□ -0.07
HSPG2-202ENST00000374676 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
HSPG2-202ENST00000374676 NUP98P52948 1817 aa14.59□□□□□ -0.07
HSPG2-202ENST00000374676 BCORQ6W2J9 1755 aa14.58□□□□□ -0.08
HSPG2-202ENST00000374676 ALDH1L2Q3SY69 923 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms