RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SALL2Q9Y467 1007 aaPredicted RBP20.86■□□□□ 0.93
HDHD3-202ENST00000374180 TJP1Q07157 1748 aa20.85■□□□□ 0.93
HDHD3-202ENST00000374180 WWC1Q8IX03 1113 aa20.85■□□□□ 0.93
HDHD3-202ENST00000374180 CFAP44Q96MT7 982 aa20.85■□□□□ 0.93
HDHD3-202ENST00000374180 USP16Q9Y5T5 823 aa20.85■□□□□ 0.93
HDHD3-202ENST00000374180 COL5A3P25940 1745 aaPredicted RBP20.85■□□□□ 0.93
HDHD3-202ENST00000374180 PRAMEF22A3QJZ6 481 aa20.84■□□□□ 0.93
HDHD3-202ENST00000374180 ADRA2BP18089 450 aa20.84■□□□□ 0.93
HDHD3-202ENST00000374180 CASZ1Q86V15 1759 aa20.84■□□□□ 0.93
HDHD3-202ENST00000374180 CICQ96RK0 1608 aaPredicted RBP20.84■□□□□ 0.93
HDHD3-202ENST00000374180 QSER1Q2KHR3 1735 aa20.83■□□□□ 0.93
HDHD3-202ENST00000374180 GIGYF1O75420 1035 aaPredicted RBP20.83■□□□□ 0.93
HDHD3-202ENST00000374180 MYH14Q7Z406 1995 aaKnown RBP20.83■□□□□ 0.93
HDHD3-202ENST00000374180 TUBGCP6Q96RT7 1819 aa20.83■□□□□ 0.92
HDHD3-202ENST00000374180 CANXP27824 592 aaKnown RBP20.82■□□□□ 0.92
HDHD3-202ENST00000374180 GNAI1P63096 354 aa20.82■□□□□ 0.92
HDHD3-202ENST00000374180 ARHGEF1Q92888 912 aaKnown RBP20.82■□□□□ 0.92
HDHD3-202ENST00000374180 IFT57Q9NWB7 429 aa20.82■□□□□ 0.92
HDHD3-202ENST00000374180 ZBTB1Q9Y2K1 713 aa20.82■□□□□ 0.92
HDHD3-202ENST00000374180 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
HDHD3-202ENST00000374180 A1BGP04217 495 aa20.81■□□□□ 0.92
HDHD3-202ENST00000374180 RFC4P35249 363 aa20.81■□□□□ 0.92
HDHD3-202ENST00000374180 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
HDHD3-202ENST00000374180 KDM3BQ7LBC6 1761 aa20.81■□□□□ 0.92
HDHD3-202ENST00000374180 ZNF853P0CG23 659 aa20.81■□□□□ 0.92
HDHD3-202ENST00000374180 MBIPQ9NS73 344 aa20.8■□□□□ 0.92
HDHD3-202ENST00000374180 SOS1Q07889 1333 aaPredicted RBP20.79■□□□□ 0.92
HDHD3-202ENST00000374180 PTGER2P43116 358 aa20.78■□□□□ 0.92
HDHD3-202ENST00000374180 MSL1Q68DK7 614 aa20.78■□□□□ 0.92
HDHD3-202ENST00000374180 NPM2Q86SE8 214 aaKnown RBP20.78■□□□□ 0.92
HDHD3-202ENST00000374180 IL6STP40189 918 aaPredicted RBP20.77■□□□□ 0.92
HDHD3-202ENST00000374180 EIF5P55010 431 aaKnown RBP20.77■□□□□ 0.92
HDHD3-202ENST00000374180 WDR63Q8IWG1 891 aa20.77■□□□□ 0.92
HDHD3-202ENST00000374180 ZNF330Q9Y3S2 320 aaPredicted RBP20.77■□□□□ 0.92
HDHD3-202ENST00000374180 POLD1P28340 1107 aa20.76■□□□□ 0.91
HDHD3-202ENST00000374180 PPP1R1BQ9UD71 204 aaPredicted RBP20.76■□□□□ 0.91
HDHD3-202ENST00000374180 IL16Q14005 1332 aa20.76■□□□□ 0.91
HDHD3-202ENST00000374180 A0A087WZG4 1122 aa20.75■□□□□ 0.91
HDHD3-202ENST00000374180 ZPR1O75312 459 aa20.75■□□□□ 0.91
HDHD3-202ENST00000374180 PIP4K2AP48426 406 aaPredicted RBP20.75■□□□□ 0.91
HDHD3-202ENST00000374180 KRT24Q2M2I5 525 aa20.75■□□□□ 0.91
HDHD3-202ENST00000374180 COL15A1P39059 1388 aa20.75■□□□□ 0.91
HDHD3-202ENST00000374180 EIF2S2P20042 333 aaKnown RBP20.75■□□□□ 0.91
HDHD3-202ENST00000374180 NLGN1Q8N2Q7 840 aa20.75■□□□□ 0.91
HDHD3-202ENST00000374180 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
HDHD3-202ENST00000374180 SRP68Q9UHB9 627 aaKnown RBP20.75■□□□□ 0.91
HDHD3-202ENST00000374180 NBPF26B4DH59 902 aa20.74■□□□□ 0.91
HDHD3-202ENST00000374180 NBPF10Q6P3W6 841 aaKnown RBP20.74■□□□□ 0.91
HDHD3-202ENST00000374180 NBPF15Q8N660 670 aa20.74■□□□□ 0.91
HDHD3-202ENST00000374180 ARXQ96QS3 562 aa20.74■□□□□ 0.91
HDHD3-202ENST00000374180 USP42Q9H9J4 1324 aaKnown RBP20.74■□□□□ 0.91
HDHD3-202ENST00000374180 GYS1P13807 737 aa20.73■□□□□ 0.91
HDHD3-202ENST00000374180 NARFQ9UHQ1 456 aa20.73■□□□□ 0.91
HDHD3-202ENST00000374180 LRP5O75197 1615 aa20.73■□□□□ 0.91
HDHD3-202ENST00000374180 DUSP27Q5VZP5 1158 aa20.72■□□□□ 0.91
HDHD3-202ENST00000374180 TSR2Q969E8 191 aaKnown RBP20.72■□□□□ 0.91
HDHD3-202ENST00000374180 HOXB7P09629 217 aa20.71■□□□□ 0.91
HDHD3-202ENST00000374180 USPL1Q5W0Q7 1092 aa20.71■□□□□ 0.91
HDHD3-202ENST00000374180 TBC1D2BQ9UPU7 963 aa20.71■□□□□ 0.91
HDHD3-202ENST00000374180 MYL6BP14649 208 aa20.7■□□□□ 0.9
HDHD3-202ENST00000374180 NECTIN2Q92692 538 aa20.7■□□□□ 0.9
HDHD3-202ENST00000374180 ERBB4Q15303 1308 aa20.69■□□□□ 0.9
HDHD3-202ENST00000374180 ELL2O00472 640 aaPredicted RBP20.69■□□□□ 0.9
HDHD3-202ENST00000374180 FKBP8Q14318 412 aa20.69■□□□□ 0.9
HDHD3-202ENST00000374180 DZIP3Q86Y13 1208 aaKnown RBP20.69■□□□□ 0.9
HDHD3-202ENST00000374180 MMP10P09238 476 aa20.69■□□□□ 0.9
HDHD3-202ENST00000374180 HDGFL1Q5TGJ6 251 aa20.69■□□□□ 0.9
HDHD3-202ENST00000374180 C8orf58Q8NAV2 365 aa20.69■□□□□ 0.9
HDHD3-202ENST00000374180 ZNF521Q96K83 1311 aa20.68■□□□□ 0.9
HDHD3-202ENST00000374180 MYH16Q9H6N6 1097 aa20.68■□□□□ 0.9
HDHD3-202ENST00000374180 LAMB4A4D0S4 1761 aa20.67■□□□□ 0.9
HDHD3-202ENST00000374180 C4AP0C0L4 1744 aa20.67■□□□□ 0.9
HDHD3-202ENST00000374180 GOLGA2Q08379 1002 aa20.67■□□□□ 0.9
HDHD3-202ENST00000374180 SPINK5Q9NQ38 1064 aaPredicted RBP20.67■□□□□ 0.9
HDHD3-202ENST00000374180 FANCIQ9NVI1 1328 aa20.66■□□□□ 0.9
HDHD3-202ENST00000374180 PDIA6Q15084 440 aa20.66■□□□□ 0.9
HDHD3-202ENST00000374180 BCL2L12Q9HB09 334 aa20.66■□□□□ 0.9
HDHD3-202ENST00000374180 CAMTA2O94983 1202 aa20.65■□□□□ 0.9
HDHD3-202ENST00000374180 CHMP4AQ9BY43 222 aa20.65■□□□□ 0.9
HDHD3-202ENST00000374180 COL24A1Q17RW2 1714 aa20.64■□□□□ 0.9
HDHD3-202ENST00000374180 ANXA1P04083 346 aa20.64■□□□□ 0.89
HDHD3-202ENST00000374180 PROSER3Q2NL68 480 aa20.64■□□□□ 0.89
HDHD3-202ENST00000374180 TSPYL6Q8N831 410 aa20.64■□□□□ 0.89
HDHD3-202ENST00000374180 FHDC1Q9C0D6 1143 aaPredicted RBP20.64■□□□□ 0.89
HDHD3-202ENST00000374180 DDX21Q9NR30 783 aaKnown RBP eCLIP20.64■□□□□ 0.89
HDHD3-202ENST00000374180 PARP3Q9Y6F1 533 aa20.64■□□□□ 0.89
HDHD3-202ENST00000374180 TM4SF1P30408 202 aa20.63■□□□□ 0.89
HDHD3-202ENST00000374180 KLHL34Q8N239 644 aa20.63■□□□□ 0.89
HDHD3-202ENST00000374180 CHPF2Q9P2E5 772 aa20.63■□□□□ 0.89
HDHD3-202ENST00000374180 DBF4Q9UBU7 674 aaPredicted RBP20.63■□□□□ 0.89
HDHD3-202ENST00000374180 TWISTNBQ3B726 338 aaPredicted RBP20.62■□□□□ 0.89
HDHD3-202ENST00000374180 KIF6Q6ZMV9 814 aa20.62■□□□□ 0.89
HDHD3-202ENST00000374180 NFIXQ14938 502 aa20.62■□□□□ 0.89
HDHD3-202ENST00000374180 CLEC4GQ6UXB4 293 aa20.62■□□□□ 0.89
HDHD3-202ENST00000374180 BICDL1Q6ZP65 573 aa20.62■□□□□ 0.89
HDHD3-202ENST00000374180 TTLL7Q6ZT98 887 aa20.62■□□□□ 0.89
HDHD3-202ENST00000374180 LRP10Q7Z4F1 713 aa20.62■□□□□ 0.89
HDHD3-202ENST00000374180 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
HDHD3-202ENST00000374180 E9PSI1 815 aa20.61■□□□□ 0.89
HDHD3-202ENST00000374180 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms