RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 MSL1Q68DK7 614 aa15.78■□□□□ 0.12
HDAC8-201ENST00000373554 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
HDAC8-201ENST00000373554 ARXQ96QS3 562 aa15.78■□□□□ 0.12
HDAC8-201ENST00000373554 MYH14Q7Z406 1995 aaKnown RBP15.78■□□□□ 0.12
HDAC8-201ENST00000373554 C4AP0C0L4 1744 aa15.77■□□□□ 0.12
HDAC8-201ENST00000373554 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
HDAC8-201ENST00000373554 SOS1Q07889 1333 aaPredicted RBP15.76■□□□□ 0.11
HDAC8-201ENST00000373554 APAF1O14727 1248 aa15.76■□□□□ 0.11
HDAC8-201ENST00000373554 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
HDAC8-201ENST00000373554 MIS18AQ9NYP9 233 aa15.76■□□□□ 0.11
HDAC8-201ENST00000373554 ZBTB1Q9Y2K1 713 aa15.76■□□□□ 0.11
HDAC8-201ENST00000373554 COL15A1P39059 1388 aa15.75■□□□□ 0.11
HDAC8-201ENST00000373554 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
HDAC8-201ENST00000373554 TSPYL4Q9UJ04 414 aa15.75■□□□□ 0.11
HDAC8-201ENST00000373554 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
HDAC8-201ENST00000373554 BABAM1Q9NWV8 329 aa15.74■□□□□ 0.11
HDAC8-201ENST00000373554 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
HDAC8-201ENST00000373554 USP42Q9H9J4 1324 aaKnown RBP15.73■□□□□ 0.11
HDAC8-201ENST00000373554 LAMB4A4D0S4 1761 aa15.73■□□□□ 0.11
HDAC8-201ENST00000373554 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
HDAC8-201ENST00000373554 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
HDAC8-201ENST00000373554 NLGN1Q8N2Q7 840 aa15.73■□□□□ 0.11
HDAC8-201ENST00000373554 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
HDAC8-201ENST00000373554 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.11
HDAC8-201ENST00000373554 ZPR1O75312 459 aa15.71■□□□□ 0.11
HDAC8-201ENST00000373554 A1BGP04217 495 aa15.71■□□□□ 0.11
HDAC8-201ENST00000373554 GYS1P13807 737 aa15.71■□□□□ 0.11
HDAC8-201ENST00000373554 IL6STP40189 918 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-201ENST00000373554 EIF4A1P60842 406 aaKnown RBP15.71■□□□□ 0.11
HDAC8-201ENST00000373554 CALD1Q05682 793 aaKnown RBP15.71■□□□□ 0.11
HDAC8-201ENST00000373554 SRP68Q9UHB9 627 aaKnown RBP15.71■□□□□ 0.11
HDAC8-201ENST00000373554 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-201ENST00000373554 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
HDAC8-201ENST00000373554 A0A087WZG4 1122 aa15.7■□□□□ 0.1
HDAC8-201ENST00000373554 EIF5P55010 431 aaKnown RBP15.7■□□□□ 0.1
HDAC8-201ENST00000373554 SYT17Q9BSW7 474 aa15.7■□□□□ 0.1
HDAC8-201ENST00000373554 NARFQ9UHQ1 456 aa15.7■□□□□ 0.1
HDAC8-201ENST00000373554 LAS1LQ9Y4W2 734 aaKnown RBP15.7■□□□□ 0.1
HDAC8-201ENST00000373554 GIGYF1O75420 1035 aaPredicted RBP15.69■□□□□ 0.1
HDAC8-201ENST00000373554 MMP10P09238 476 aa15.69■□□□□ 0.1
HDAC8-201ENST00000373554 FAM9BQ8IZU0 186 aa15.69■□□□□ 0.1
HDAC8-201ENST00000373554 CHL1O00533 1208 aa15.68■□□□□ 0.1
HDAC8-201ENST00000373554 USPL1Q5W0Q7 1092 aa15.68■□□□□ 0.1
HDAC8-201ENST00000373554 SCN7AQ01118 1682 aa15.67■□□□□ 0.1
HDAC8-201ENST00000373554 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
HDAC8-201ENST00000373554 FKBP8Q14318 412 aa15.67■□□□□ 0.1
HDAC8-201ENST00000373554 CFAP44Q96MT7 982 aa15.67■□□□□ 0.1
HDAC8-201ENST00000373554 PARP3Q9Y6F1 533 aa15.67■□□□□ 0.1
HDAC8-201ENST00000373554 PIP4K2AP48426 406 aaPredicted RBP15.66■□□□□ 0.1
HDAC8-201ENST00000373554 CD2APQ9Y5K6 639 aa15.66■□□□□ 0.1
HDAC8-201ENST00000373554 GNAI1P63096 354 aa15.65■□□□□ 0.1
HDAC8-201ENST00000373554 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
HDAC8-201ENST00000373554 DZIP3Q86Y13 1208 aaKnown RBP15.65■□□□□ 0.1
HDAC8-201ENST00000373554 IFT57Q9NWB7 429 aa15.65■□□□□ 0.1
HDAC8-201ENST00000373554 ERBB4Q15303 1308 aa15.65■□□□□ 0.1
HDAC8-201ENST00000373554 NBPF26B4DH59 902 aa15.64■□□□□ 0.09
HDAC8-201ENST00000373554 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
HDAC8-201ENST00000373554 NBPF10Q6P3W6 841 aaKnown RBP15.64■□□□□ 0.09
HDAC8-201ENST00000373554 NBPF15Q8N660 670 aa15.64■□□□□ 0.09
HDAC8-201ENST00000373554 MBIPQ9NS73 344 aa15.64■□□□□ 0.09
HDAC8-201ENST00000373554 TBC1D2BQ9UPU7 963 aa15.64■□□□□ 0.09
HDAC8-201ENST00000373554 BCORQ6W2J9 1755 aa15.63■□□□□ 0.09
HDAC8-201ENST00000373554 CCER2I3L3R5 266 aa15.63■□□□□ 0.09
HDAC8-201ENST00000373554 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
HDAC8-201ENST00000373554 NLGN2Q8NFZ4 835 aa15.63■□□□□ 0.09
HDAC8-201ENST00000373554 BCL2L12Q9HB09 334 aa15.63■□□□□ 0.09
HDAC8-201ENST00000373554 C10orf71Q711Q0 1435 aa15.62■□□□□ 0.09
HDAC8-201ENST00000373554 HOXB7P09629 217 aa15.62■□□□□ 0.09
HDAC8-201ENST00000373554 ZNF853P0CG23 659 aa15.62■□□□□ 0.09
HDAC8-201ENST00000373554 EIF2S2P20042 333 aaKnown RBP15.62■□□□□ 0.09
HDAC8-201ENST00000373554 DDR1Q08345 913 aa15.62■□□□□ 0.09
HDAC8-201ENST00000373554 DIEXFQ68CQ4 756 aaKnown RBP15.62■□□□□ 0.09
HDAC8-201ENST00000373554 ZNF652Q9Y2D9 606 aa15.62■□□□□ 0.09
HDAC8-201ENST00000373554 POLRMTO00411 1230 aaKnown RBP15.61■□□□□ 0.09
HDAC8-201ENST00000373554 CAMTA2O94983 1202 aa15.61■□□□□ 0.09
HDAC8-201ENST00000373554 MYL6BP14649 208 aa15.61■□□□□ 0.09
HDAC8-201ENST00000373554 TM4SF1P30408 202 aa15.61■□□□□ 0.09
HDAC8-201ENST00000373554 NFIXQ14938 502 aa15.61■□□□□ 0.09
HDAC8-201ENST00000373554 KRT24Q2M2I5 525 aa15.61■□□□□ 0.09
HDAC8-201ENST00000373554 BICDL1Q6ZP65 573 aa15.6■□□□□ 0.09
HDAC8-201ENST00000373554 NGEFQ8N5V2 710 aa15.6■□□□□ 0.09
HDAC8-201ENST00000373554 SALL2Q9Y467 1007 aaPredicted RBP15.6■□□□□ 0.09
HDAC8-201ENST00000373554 CARMIL3Q8ND23 1372 aa15.6■□□□□ 0.09
HDAC8-201ENST00000373554 KIF13BQ9NQT8 1826 aa15.59■□□□□ 0.09
HDAC8-201ENST00000373554 RGL2O15211 777 aa15.59■□□□□ 0.09
HDAC8-201ENST00000373554 HDGFL1Q5TGJ6 251 aa15.59■□□□□ 0.09
HDAC8-201ENST00000373554 TBC1D9BQ66K14 1250 aa15.59■□□□□ 0.09
HDAC8-201ENST00000373554 KIF6Q6ZMV9 814 aa15.59■□□□□ 0.09
HDAC8-201ENST00000373554 IL16Q14005 1332 aa15.59■□□□□ 0.09
HDAC8-201ENST00000373554 GPR162Q16538 588 aa15.58■□□□□ 0.08
HDAC8-201ENST00000373554 DUSP27Q5VZP5 1158 aa15.58■□□□□ 0.08
HDAC8-201ENST00000373554 CLEC4GQ6UXB4 293 aa15.58■□□□□ 0.08
HDAC8-201ENST00000373554 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.08
HDAC8-201ENST00000373554 NECTIN2Q92692 538 aa15.58■□□□□ 0.08
HDAC8-201ENST00000373554 NRXN2Q9P2S2 1712 aa15.57■□□□□ 0.08
HDAC8-201ENST00000373554 SERPINB2P05120 415 aa15.57■□□□□ 0.08
HDAC8-201ENST00000373554 WDR63Q8IWG1 891 aa15.57■□□□□ 0.08
HDAC8-201ENST00000373554 SETDB2Q96T68 719 aa15.57■□□□□ 0.08
HDAC8-201ENST00000373554 PXDNLA1KZ92 1463 aa15.57■□□□□ 0.08
HDAC8-201ENST00000373554 NPHP1O15259 732 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms