RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 POLD1P28340 1107 aa28.06■■■□□ 2.08
TMEM54-202ENST00000373463 SYT17Q9BSW7 474 aa28.06■■■□□ 2.08
TMEM54-202ENST00000373463 PRAMEF22A3QJZ6 481 aa28.05■■■□□ 2.08
TMEM54-202ENST00000373463 GYS1P13807 737 aa28.03■■■□□ 2.08
TMEM54-202ENST00000373463 SRP68Q9UHB9 627 aaKnown RBP28.03■■■□□ 2.08
TMEM54-202ENST00000373463 TRIM35Q9UPQ4 493 aa28.03■■■□□ 2.08
TMEM54-202ENST00000373463 USP16Q9Y5T5 823 aa28.02■■■□□ 2.08
TMEM54-202ENST00000373463 USP42Q9H9J4 1324 aaKnown RBP28.01■■■□□ 2.07
TMEM54-202ENST00000373463 RFC4P35249 363 aa28.01■■■□□ 2.07
TMEM54-202ENST00000373463 NEUROD2Q15784 382 aa28.01■■■□□ 2.07
TMEM54-202ENST00000373463 STARD3NLO95772 234 aa28■■■□□ 2.07
TMEM54-202ENST00000373463 PNISRQ8TF01 805 aaKnown RBP28■■■□□ 2.07
TMEM54-202ENST00000373463 TEX13AQ9BXU3 409 aaPredicted RBP28■■■□□ 2.07
TMEM54-202ENST00000373463 COL15A1P39059 1388 aa27.99■■■□□ 2.07
TMEM54-202ENST00000373463 LAMB4A4D0S4 1761 aa27.99■■■□□ 2.07
TMEM54-202ENST00000373463 CANXP27824 592 aaKnown RBP27.99■■■□□ 2.07
TMEM54-202ENST00000373463 A1BGP04217 495 aa27.98■■■□□ 2.07
TMEM54-202ENST00000373463 SNRPA1P09661 255 aaKnown RBP27.97■■■□□ 2.07
TMEM54-202ENST00000373463 EIF5P55010 431 aaKnown RBP27.97■■■□□ 2.07
TMEM54-202ENST00000373463 MRS2Q9HD23 443 aa27.97■■■□□ 2.07
TMEM54-202ENST00000373463 APAF1O14727 1248 aa27.96■■■□□ 2.07
TMEM54-202ENST00000373463 EIF4A1P60842 406 aaKnown RBP27.96■■■□□ 2.07
TMEM54-202ENST00000373463 LMOD3Q0VAK6 560 aa27.96■■■□□ 2.07
TMEM54-202ENST00000373463 NLGN2Q8NFZ4 835 aa27.96■■■□□ 2.07
TMEM54-202ENST00000373463 MMP10P09238 476 aa27.95■■■□□ 2.06
TMEM54-202ENST00000373463 FKBP8Q14318 412 aa27.95■■■□□ 2.06
TMEM54-202ENST00000373463 KLHL34Q8N239 644 aa27.95■■■□□ 2.06
TMEM54-202ENST00000373463 NLGN1Q8N2Q7 840 aa27.95■■■□□ 2.06
TMEM54-202ENST00000373463 PIP4K2AP48426 406 aaPredicted RBP27.94■■■□□ 2.06
TMEM54-202ENST00000373463 BCL2L12Q9HB09 334 aa27.94■■■□□ 2.06
TMEM54-202ENST00000373463 USPL1Q5W0Q7 1092 aa27.93■■■□□ 2.06
TMEM54-202ENST00000373463 NARFQ9UHQ1 456 aa27.93■■■□□ 2.06
TMEM54-202ENST00000373463 SCN7AQ01118 1682 aa27.92■■■□□ 2.06
TMEM54-202ENST00000373463 GIGYF1O75420 1035 aaPredicted RBP27.92■■■□□ 2.06
TMEM54-202ENST00000373463 KIF13BQ9NQT8 1826 aa27.91■■■□□ 2.06
TMEM54-202ENST00000373463 NBPF26B4DH59 902 aa27.91■■■□□ 2.06
TMEM54-202ENST00000373463 IL6STP40189 918 aaPredicted RBP27.91■■■□□ 2.06
TMEM54-202ENST00000373463 NBPF10Q6P3W6 841 aaKnown RBP27.91■■■□□ 2.06
TMEM54-202ENST00000373463 NBPF15Q8N660 670 aa27.91■■■□□ 2.06
TMEM54-202ENST00000373463 TSPYL4Q9UJ04 414 aa27.91■■■□□ 2.06
TMEM54-202ENST00000373463 KIAA1551Q9HCM1 1747 aa27.89■■■□□ 2.06
TMEM54-202ENST00000373463 DDR1Q08345 913 aa27.89■■■□□ 2.06
TMEM54-202ENST00000373463 BABAM1Q9NWV8 329 aa27.89■■■□□ 2.06
TMEM54-202ENST00000373463 BCORQ6W2J9 1755 aa27.88■■■□□ 2.05
TMEM54-202ENST00000373463 CHL1O00533 1208 aa27.88■■■□□ 2.05
TMEM54-202ENST00000373463 CD2APQ9Y5K6 639 aa27.88■■■□□ 2.05
TMEM54-202ENST00000373463 SENP3-EIF4A1A0A087X0R7 540 aa27.87■■■□□ 2.05
TMEM54-202ENST00000373463 ZPR1O75312 459 aa27.87■■■□□ 2.05
TMEM54-202ENST00000373463 TM4SF1P30408 202 aa27.87■■■□□ 2.05
TMEM54-202ENST00000373463 TBC1D2BQ9UPU7 963 aa27.86■■■□□ 2.05
TMEM54-202ENST00000373463 ZNF330Q9Y3S2 320 aaPredicted RBP27.86■■■□□ 2.05
TMEM54-202ENST00000373463 C10orf71Q711Q0 1435 aa27.85■■■□□ 2.05
TMEM54-202ENST00000373463 AFDNP55196 1824 aaKnown RBP27.85■■■□□ 2.05
TMEM54-202ENST00000373463 NRXN2Q9P2S2 1712 aa27.84■■■□□ 2.05
TMEM54-202ENST00000373463 A0A087WZG4 1122 aa27.83■■■□□ 2.05
TMEM54-202ENST00000373463 POLRMTO00411 1230 aaKnown RBP27.83■■■□□ 2.05
TMEM54-202ENST00000373463 NFIXQ14938 502 aa27.83■■■□□ 2.05
TMEM54-202ENST00000373463 KRT24Q2M2I5 525 aa27.83■■■□□ 2.05
TMEM54-202ENST00000373463 CAMTA2O94983 1202 aa27.82■■■□□ 2.04
TMEM54-202ENST00000373463 ZNF853P0CG23 659 aa27.82■■■□□ 2.04
TMEM54-202ENST00000373463 LAS1LQ9Y4W2 734 aaKnown RBP27.81■■■□□ 2.04
TMEM54-202ENST00000373463 PARP3Q9Y6F1 533 aa27.81■■■□□ 2.04
TMEM54-202ENST00000373463 CFAP44Q96MT7 982 aa27.8■■■□□ 2.04
TMEM54-202ENST00000373463 PXDNLA1KZ92 1463 aa27.8■■■□□ 2.04
TMEM54-202ENST00000373463 N4BP2Q86UW6 1770 aaPredicted RBP27.8■■■□□ 2.04
TMEM54-202ENST00000373463 DZIP3Q86Y13 1208 aaKnown RBP27.79■■■□□ 2.04
TMEM54-202ENST00000373463 TBC1D9BQ66K14 1250 aa27.78■■■□□ 2.04
TMEM54-202ENST00000373463 MBIPQ9NS73 344 aa27.78■■■□□ 2.04
TMEM54-202ENST00000373463 YBX3P16989 372 aaKnown RBP eCLIP27.76■■■□□ 2.033e-6■□□□□ 9.2
TMEM54-202ENST00000373463 PDIA6Q15084 440 aa27.76■■■□□ 2.03
TMEM54-202ENST00000373463 LRP10Q7Z4F1 713 aa27.76■■■□□ 2.03
TMEM54-202ENST00000373463 CCDC27Q2M243 656 aa27.75■■■□□ 2.03
TMEM54-202ENST00000373463 IFT57Q9NWB7 429 aa27.75■■■□□ 2.03
TMEM54-202ENST00000373463 BICDL1Q6ZP65 573 aa27.74■■■□□ 2.03
TMEM54-202ENST00000373463 FAM9BQ8IZU0 186 aa27.74■■■□□ 2.03
TMEM54-202ENST00000373463 BRCA1P38398 1863 aaKnown RBP27.74■■■□□ 2.03
TMEM54-202ENST00000373463 EIF2S2P20042 333 aaKnown RBP27.73■■■□□ 2.03
TMEM54-202ENST00000373463 PROSER3Q2NL68 480 aa27.73■■■□□ 2.03
TMEM54-202ENST00000373463 WWC1Q8IX03 1113 aa27.73■■■□□ 2.03
TMEM54-202ENST00000373463 ERBB4Q15303 1308 aa27.72■■■□□ 2.03
TMEM54-202ENST00000373463 SERPINB2P05120 415 aa27.72■■■□□ 2.03
TMEM54-202ENST00000373463 MYL6BP14649 208 aa27.72■■■□□ 2.03
TMEM54-202ENST00000373463 TTLL7Q6ZT98 887 aa27.72■■■□□ 2.03
TMEM54-202ENST00000373463 CARMIL3Q8ND23 1372 aa27.72■■■□□ 2.03
TMEM54-202ENST00000373463 ANXA1P04083 346 aa27.71■■■□□ 2.03
TMEM54-202ENST00000373463 GPR162Q16538 588 aa27.71■■■□□ 2.03
TMEM54-202ENST00000373463 NCBP3Q53F19 620 aaKnown RBP27.71■■■□□ 2.03
TMEM54-202ENST00000373463 NPM2Q86SE8 214 aaKnown RBP27.71■■■□□ 2.03
TMEM54-202ENST00000373463 NGEFQ8N5V2 710 aa27.71■■■□□ 2.03
TMEM54-202ENST00000373463 WWC3Q9ULE0 1092 aa27.71■■■□□ 2.03
TMEM54-202ENST00000373463 GOLGB1Q14789 3259 aaKnown RBP27.7■■■□□ 2.03
TMEM54-202ENST00000373463 ANKRD31Q8N7Z5 1873 aa27.7■■■□□ 2.03
TMEM54-202ENST00000373463 DCAF8L1A6NGE4 600 aa27.7■■■□□ 2.02
TMEM54-202ENST00000373463 TGFB2P61812 414 aa27.7■■■□□ 2.02
TMEM54-202ENST00000373463 GNAI1P63096 354 aa27.7■■■□□ 2.02
TMEM54-202ENST00000373463 HLFQ16534 295 aa27.7■■■□□ 2.02
TMEM54-202ENST00000373463 PELP1Q8IZL8 1130 aaKnown RBP27.7■■■□□ 2.02
TMEM54-202ENST00000373463 NECTIN2Q92692 538 aa27.7■■■□□ 2.02
TMEM54-202ENST00000373463 NUP98P52948 1817 aa27.69■■■□□ 2.02
TMEM54-202ENST00000373463 A0A0G2JLW4 131 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms