RNA–Protein interactions for RNA: ENST00000372257.6

ERI3-201, Transcript of ERI1 exoribonuclease family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERI3, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERI3-201ENST00000372257 ZNF827Q17R98 1081 aa28.48■■■□□ 2.15
ERI3-201ENST00000372257 TRMT2AQ8IZ69 625 aaKnown RBP28.48■■■□□ 2.15
ERI3-201ENST00000372257 NECTIN2Q92692 538 aa28.48■■■□□ 2.15
ERI3-201ENST00000372257 COL5A3P25940 1745 aaPredicted RBP28.47■■■□□ 2.15
ERI3-201ENST00000372257 C4BP0C0L5 1744 aa28.47■■■□□ 2.15
ERI3-201ENST00000372257 PIP4K2AP48426 406 aaPredicted RBP28.45■■■□□ 2.15
ERI3-201ENST00000372257 A1BGP04217 495 aa28.45■■■□□ 2.14
ERI3-201ENST00000372257 TWISTNBQ3B726 338 aaPredicted RBP28.45■■■□□ 2.14
ERI3-201ENST00000372257 INTS5Q6P9B9 1019 aaKnown RBP28.45■■■□□ 2.14
ERI3-201ENST00000372257 AKT1S1Q96B36 256 aa28.45■■■□□ 2.14
ERI3-201ENST00000372257 AK7Q96M32 723 aa28.45■■■□□ 2.14
ERI3-201ENST00000372257 CNTNAP4Q9C0A0 1308 aa28.44■■■□□ 2.14
ERI3-201ENST00000372257 SMIM5Q71RC9 77 aa28.44■■■□□ 2.14
ERI3-201ENST00000372257 MYH14Q7Z406 1995 aaKnown RBP28.43■■■□□ 2.14
ERI3-201ENST00000372257 GNPATO15228 680 aa28.43■■■□□ 2.14
ERI3-201ENST00000372257 NBPF14Q5TI25 921 aa28.43■■■□□ 2.14
ERI3-201ENST00000372257 CCDC87Q9NVE4 849 aa28.43■■■□□ 2.14
ERI3-201ENST00000372257 STK32BQ9NY57 414 aa28.43■■■□□ 2.14
ERI3-201ENST00000372257 ZBTB1Q9Y2K1 713 aa28.43■■■□□ 2.14
ERI3-201ENST00000372257 HOXB7P09629 217 aa28.42■■■□□ 2.14
ERI3-201ENST00000372257 AMIGO3Q86WK7 504 aa28.42■■■□□ 2.14
ERI3-201ENST00000372257 LAMB4A4D0S4 1761 aa28.42■■■□□ 2.14
ERI3-201ENST00000372257 CANXP27824 592 aaKnown RBP28.42■■■□□ 2.14
ERI3-201ENST00000372257 SLC15A2Q16348 729 aa28.42■■■□□ 2.14
ERI3-201ENST00000372257 RC3H1Q5TC82 1133 aaKnown RBP28.42■■■□□ 2.14
ERI3-201ENST00000372257 HDGFL1Q5TGJ6 251 aa28.42■■■□□ 2.14
ERI3-201ENST00000372257 TFCP2L1Q9NZI6 479 aa28.42■■■□□ 2.14
ERI3-201ENST00000372257 HMGB2P26583 209 aaKnown RBP28.41■■■□□ 2.14
ERI3-201ENST00000372257 VAMP4O75379 141 aa28.38■■■□□ 2.13
ERI3-201ENST00000372257 PHF14O94880 888 aa28.38■■■□□ 2.13
ERI3-201ENST00000372257 NBPF26B4DH59 902 aa28.38■■■□□ 2.13
ERI3-201ENST00000372257 TCERG1O14776 1098 aaKnown RBP28.38■■■□□ 2.13
ERI3-201ENST00000372257 NBPF10Q6P3W6 841 aaKnown RBP28.38■■■□□ 2.13
ERI3-201ENST00000372257 NBPF15Q8N660 670 aa28.38■■■□□ 2.13
ERI3-201ENST00000372257 ZNF330Q9Y3S2 320 aaPredicted RBP28.38■■■□□ 2.13
ERI3-201ENST00000372257 RTCBQ9Y3I0 505 aaKnown RBP28.37■■■□□ 2.13
ERI3-201ENST00000372257 RPS6KA4O75676 772 aa28.36■■■□□ 2.13
ERI3-201ENST00000372257 ANXA1P04083 346 aa28.36■■■□□ 2.13
ERI3-201ENST00000372257 MYL6BP14649 208 aa28.36■■■□□ 2.13
ERI3-201ENST00000372257 CHPF2Q9P2E5 772 aa28.36■■■□□ 2.13
ERI3-201ENST00000372257 R3HDM1Q15032 1099 aaKnown RBP28.35■■■□□ 2.13
ERI3-201ENST00000372257 SOS1Q07889 1333 aaPredicted RBP28.35■■■□□ 2.13
ERI3-201ENST00000372257 PDIA6Q15084 440 aa28.35■■■□□ 2.13
ERI3-201ENST00000372257 PROSER3Q2NL68 480 aa28.35■■■□□ 2.13
ERI3-201ENST00000372257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.34■■■□□ 2.13
ERI3-201ENST00000372257 UBR3Q6ZT12 1888 aa28.33■■■□□ 2.13
ERI3-201ENST00000372257 PSDA5PKW4 1024 aaPredicted RBP28.33■■■□□ 2.13
ERI3-201ENST00000372257 CCDC30Q5VVM6 783 aa28.33■■■□□ 2.13
ERI3-201ENST00000372257 TUBGCP6Q96RT7 1819 aa28.33■■■□□ 2.13
ERI3-201ENST00000372257 PNPLA7Q6ZV29 1317 aa28.32■■■□□ 2.12
ERI3-201ENST00000372257 IL6STP40189 918 aaPredicted RBP28.32■■■□□ 2.12
ERI3-201ENST00000372257 ERBB4Q15303 1308 aa28.31■■■□□ 2.12
ERI3-201ENST00000372257 SSFA2P28290 1259 aa28.31■■■□□ 2.12
ERI3-201ENST00000372257 EIF5P55010 431 aaKnown RBP28.31■■■□□ 2.12
ERI3-201ENST00000372257 PDGFDQ9GZP0 370 aaPredicted RBP28.31■■■□□ 2.12
ERI3-201ENST00000372257 DBF4Q9UBU7 674 aaPredicted RBP28.31■■■□□ 2.12
ERI3-201ENST00000372257 TRAPPC3LQ5T215 181 aa28.3■■■□□ 2.12
ERI3-201ENST00000372257 COL23A1Q86Y22 540 aaPredicted RBP28.3■■■□□ 2.12
ERI3-201ENST00000372257 DDX21Q9NR30 783 aaKnown RBP eCLIP28.3■■■□□ 2.12
ERI3-201ENST00000372257 COL15A1P39059 1388 aa28.3■■■□□ 2.12
ERI3-201ENST00000372257 MSH5O43196 834 aa28.29■■■□□ 2.12
ERI3-201ENST00000372257 ARHGEF1Q92888 912 aaKnown RBP28.29■■■□□ 2.12
ERI3-201ENST00000372257 ARXQ96QS3 562 aa28.29■■■□□ 2.12
ERI3-201ENST00000372257 NPM2Q86SE8 214 aaKnown RBP28.29■■■□□ 2.12
ERI3-201ENST00000372257 LRP10Q7Z4F1 713 aa28.28■■■□□ 2.12
ERI3-201ENST00000372257 STK31Q9BXU1 1019 aa28.28■■■□□ 2.12
ERI3-201ENST00000372257 CHMP4AQ9BY43 222 aa28.28■■■□□ 2.12
ERI3-201ENST00000372257 ADRA2BP18089 450 aa28.26■■■□□ 2.12
ERI3-201ENST00000372257 TBC1D2BQ9UPU7 963 aa28.26■■■□□ 2.12
ERI3-201ENST00000372257 SLC4A2P04920 1241 aa28.26■■■□□ 2.11
ERI3-201ENST00000372257 RFC4P35249 363 aa28.26■■■□□ 2.11
ERI3-201ENST00000372257 AIMP1Q12904 312 aaKnown RBP28.26■■■□□ 2.11
ERI3-201ENST00000372257 FLAD1Q8NFF5 587 aa28.26■■■□□ 2.11
ERI3-201ENST00000372257 BCL2L13Q9BXK5 485 aa28.26■■■□□ 2.11
ERI3-201ENST00000372257 CT47B1P0C2W7 299 aaPredicted RBP28.25■■■□□ 2.11
ERI3-201ENST00000372257 PHAXQ9H814 394 aaKnown RBP28.25■■■□□ 2.11
ERI3-201ENST00000372257 HYPKQ9NX55 129 aa28.24■■■□□ 2.11
ERI3-201ENST00000372257 SRP68Q9UHB9 627 aaKnown RBP28.24■■■□□ 2.11
ERI3-201ENST00000372257 TTLL7Q6ZT98 887 aa28.23■■■□□ 2.11
ERI3-201ENST00000372257 DZIP3Q86Y13 1208 aaKnown RBP28.23■■■□□ 2.11
ERI3-201ENST00000372257 XAGE3Q8WTP9 111 aa28.23■■■□□ 2.11
ERI3-201ENST00000372257 SSH1Q8WYL5 1049 aa28.23■■■□□ 2.11
ERI3-201ENST00000372257 QSER1Q2KHR3 1735 aa28.23■■■□□ 2.11
ERI3-201ENST00000372257 COPS6Q7L5N1 327 aa28.23■■■□□ 2.11
ERI3-201ENST00000372257 C4AP0C0L4 1744 aa28.22■■■□□ 2.11
ERI3-201ENST00000372257 A0A087WZG4 1122 aa28.22■■■□□ 2.11
ERI3-201ENST00000372257 G2E3Q7L622 706 aa28.21■■■□□ 2.11
ERI3-201ENST00000372257 ZNF428Q96B54 188 aa28.21■■■□□ 2.11
ERI3-201ENST00000372257 ZPR1O75312 459 aa28.2■■■□□ 2.11
ERI3-201ENST00000372257 USP42Q9H9J4 1324 aaKnown RBP28.2■■■□□ 2.1
ERI3-201ENST00000372257 RARSP54136 660 aaKnown RBP28.19■■■□□ 2.1
ERI3-201ENST00000372257 USPL1Q5W0Q7 1092 aa28.19■■■□□ 2.1
ERI3-201ENST00000372257 SMC4Q9NTJ3 1288 aa28.19■■■□□ 2.1
ERI3-201ENST00000372257 NARFQ9UHQ1 456 aa28.19■■■□□ 2.1
ERI3-201ENST00000372257 ALDH1L2Q3SY69 923 aa28.18■■■□□ 2.1
ERI3-201ENST00000372257 KIF6Q6ZMV9 814 aa28.18■■■□□ 2.1
ERI3-201ENST00000372257 ZBTB3Q9H5J0 574 aa28.18■■■□□ 2.1
ERI3-201ENST00000372257 CAMTA2O94983 1202 aa28.17■■■□□ 2.1
ERI3-201ENST00000372257 MRPL50Q8N5N7 158 aaKnown RBP28.17■■■□□ 2.1
ERI3-201ENST00000372257 MSL1Q68DK7 614 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms