RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 SLC16A10Q8TF71 515 aa17.87■□□□□ 0.45
SSR4-202ENST00000370085 UBR3Q6ZT12 1888 aa17.86■□□□□ 0.45
SSR4-202ENST00000370085 RPS6KA4O75676 772 aa17.86■□□□□ 0.45
SSR4-202ENST00000370085 PHF14O94880 888 aa17.86■□□□□ 0.45
SSR4-202ENST00000370085 ZNF853P0CG23 659 aa17.86■□□□□ 0.45
SSR4-202ENST00000370085 TRAPPC3LQ5T215 181 aa17.86■□□□□ 0.45
SSR4-202ENST00000370085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.85■□□□□ 0.45
SSR4-202ENST00000370085 GIGYF1O75420 1035 aaPredicted RBP17.85■□□□□ 0.45
SSR4-202ENST00000370085 PNPLA7Q6ZV29 1317 aa17.85■□□□□ 0.45
SSR4-202ENST00000370085 TUBGCP6Q96RT7 1819 aa17.85■□□□□ 0.45
SSR4-202ENST00000370085 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
SSR4-202ENST00000370085 MBIPQ9NS73 344 aa17.85■□□□□ 0.45
SSR4-202ENST00000370085 MYH14Q7Z406 1995 aaKnown RBP17.84■□□□□ 0.45
SSR4-202ENST00000370085 LAMB4A4D0S4 1761 aa17.84■□□□□ 0.45
SSR4-202ENST00000370085 RFC4P35249 363 aa17.84■□□□□ 0.45
SSR4-202ENST00000370085 A0A087WZG4 1122 aa17.83■□□□□ 0.44
SSR4-202ENST00000370085 HOXB7P09629 217 aa17.83■□□□□ 0.44
SSR4-202ENST00000370085 CANXP27824 592 aaKnown RBP17.83■□□□□ 0.44
SSR4-202ENST00000370085 INTS5Q6P9B9 1019 aaKnown RBP17.83■□□□□ 0.44
SSR4-202ENST00000370085 USP16Q9Y5T5 823 aa17.83■□□□□ 0.44
SSR4-202ENST00000370085 CASZ1Q86V15 1759 aa17.82■□□□□ 0.44
SSR4-202ENST00000370085 SOS1Q07889 1333 aaPredicted RBP17.82■□□□□ 0.44
SSR4-202ENST00000370085 COL23A1Q86Y22 540 aaPredicted RBP17.82■□□□□ 0.44
SSR4-202ENST00000370085 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
SSR4-202ENST00000370085 SPON1Q9HCB6 807 aa17.82■□□□□ 0.44
SSR4-202ENST00000370085 ZBTB1Q9Y2K1 713 aa17.82■□□□□ 0.44
SSR4-202ENST00000370085 ERBB4Q15303 1308 aa17.81■□□□□ 0.44
SSR4-202ENST00000370085 ZPR1O75312 459 aa17.81■□□□□ 0.44
SSR4-202ENST00000370085 IL6STP40189 918 aaPredicted RBP17.81■□□□□ 0.44
SSR4-202ENST00000370085 GOLGA2Q08379 1002 aa17.81■□□□□ 0.44
SSR4-202ENST00000370085 ZNF330Q9Y3S2 320 aaPredicted RBP17.81■□□□□ 0.44
SSR4-202ENST00000370085 COL15A1P39059 1388 aa17.79■□□□□ 0.44
SSR4-202ENST00000370085 PRAMEF22A3QJZ6 481 aa17.79■□□□□ 0.44
SSR4-202ENST00000370085 E9PSI1 815 aa17.79■□□□□ 0.44
SSR4-202ENST00000370085 ZBTB7AO95365 584 aa17.79■□□□□ 0.44
SSR4-202ENST00000370085 A1BGP04217 495 aa17.79■□□□□ 0.44
SSR4-202ENST00000370085 EIF2S2P20042 333 aaKnown RBP17.79■□□□□ 0.44
SSR4-202ENST00000370085 POLD1P28340 1107 aa17.79■□□□□ 0.44
SSR4-202ENST00000370085 HNRNPUQ00839 825 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSR4-202ENST00000370085 ARHGEF1Q92888 912 aaKnown RBP17.79■□□□□ 0.44
SSR4-202ENST00000370085 ZNF521Q96K83 1311 aa17.78■□□□□ 0.44
SSR4-202ENST00000370085 HDGFL1Q5TGJ6 251 aa17.78■□□□□ 0.44
SSR4-202ENST00000370085 DUSP27Q5VZP5 1158 aa17.78■□□□□ 0.44
SSR4-202ENST00000370085 TSR2Q969E8 191 aaKnown RBP17.78■□□□□ 0.44
SSR4-202ENST00000370085 ARXQ96QS3 562 aa17.78■□□□□ 0.44
SSR4-202ENST00000370085 EIF5P55010 431 aaKnown RBP17.77■□□□□ 0.44
SSR4-202ENST00000370085 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
SSR4-202ENST00000370085 NLGN1Q8N2Q7 840 aa17.76■□□□□ 0.43
SSR4-202ENST00000370085 PDGFDQ9GZP0 370 aaPredicted RBP17.76■□□□□ 0.43
SSR4-202ENST00000370085 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
SSR4-202ENST00000370085 CCDC30Q5VVM6 783 aa17.75■□□□□ 0.43
SSR4-202ENST00000370085 AMIGO3Q86WK7 504 aa17.75■□□□□ 0.43
SSR4-202ENST00000370085 PPP1R1BQ9UD71 204 aaPredicted RBP17.75■□□□□ 0.43
SSR4-202ENST00000370085 NARFQ9UHQ1 456 aa17.75■□□□□ 0.43
SSR4-202ENST00000370085 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
SSR4-202ENST00000370085 USP42Q9H9J4 1324 aaKnown RBP17.74■□□□□ 0.43
SSR4-202ENST00000370085 ELL2O00472 640 aaPredicted RBP17.74■□□□□ 0.43
SSR4-202ENST00000370085 MYL6BP14649 208 aa17.74■□□□□ 0.43
SSR4-202ENST00000370085 KRT24Q2M2I5 525 aa17.74■□□□□ 0.43
SSR4-202ENST00000370085 TWISTNBQ3B726 338 aaPredicted RBP17.74■□□□□ 0.43
SSR4-202ENST00000370085 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
SSR4-202ENST00000370085 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
SSR4-202ENST00000370085 DBF4Q9UBU7 674 aaPredicted RBP17.74■□□□□ 0.43
SSR4-202ENST00000370085 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
SSR4-202ENST00000370085 LRP5O75197 1615 aa17.73■□□□□ 0.43
SSR4-202ENST00000370085 KIF6Q6ZMV9 814 aa17.73■□□□□ 0.43
SSR4-202ENST00000370085 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
SSR4-202ENST00000370085 NECTIN2Q92692 538 aa17.73■□□□□ 0.43
SSR4-202ENST00000370085 STK31Q9BXU1 1019 aa17.73■□□□□ 0.43
SSR4-202ENST00000370085 DDX21Q9NR30 783 aaKnown RBP eCLIP17.73■□□□□ 0.43
SSR4-202ENST00000370085 NBPF26B4DH59 902 aa17.72■□□□□ 0.43
SSR4-202ENST00000370085 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
SSR4-202ENST00000370085 USPL1Q5W0Q7 1092 aa17.72■□□□□ 0.43
SSR4-202ENST00000370085 MSL1Q68DK7 614 aa17.72■□□□□ 0.43
SSR4-202ENST00000370085 NBPF10Q6P3W6 841 aaKnown RBP17.72■□□□□ 0.43
SSR4-202ENST00000370085 NBPF15Q8N660 670 aa17.72■□□□□ 0.43
SSR4-202ENST00000370085 HYPKQ9NX55 129 aa17.72■□□□□ 0.43
SSR4-202ENST00000370085 RGL2O15211 777 aa17.71■□□□□ 0.43
SSR4-202ENST00000370085 GYS1P13807 737 aa17.71■□□□□ 0.43
SSR4-202ENST00000370085 SLFN5Q08AF3 891 aa17.71■□□□□ 0.43
SSR4-202ENST00000370085 SRP68Q9UHB9 627 aaKnown RBP17.71■□□□□ 0.43
SSR4-202ENST00000370085 TBC1D2BQ9UPU7 963 aa17.71■□□□□ 0.43
SSR4-202ENST00000370085 EXOSC9Q06265 439 aaKnown RBP17.7■□□□□ 0.42
SSR4-202ENST00000370085 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
SSR4-202ENST00000370085 CHPF2Q9P2E5 772 aa17.7■□□□□ 0.42
SSR4-202ENST00000370085 CLEC4GQ6UXB4 293 aa17.69■□□□□ 0.42
SSR4-202ENST00000370085 TSPYL6Q8N831 410 aa17.69■□□□□ 0.42
SSR4-202ENST00000370085 PARP3Q9Y6F1 533 aa17.69■□□□□ 0.42
SSR4-202ENST00000370085 ZBED9Q6R2W3 1325 aa17.69■□□□□ 0.42
SSR4-202ENST00000370085 CACNA1FO60840 1977 aa17.68■□□□□ 0.42
SSR4-202ENST00000370085 ERVV-1B6SEH8 477 aa17.68■□□□□ 0.42
SSR4-202ENST00000370085 PTGER2P43116 358 aa17.68■□□□□ 0.42
SSR4-202ENST00000370085 COL24A1Q17RW2 1714 aa17.68■□□□□ 0.42
SSR4-202ENST00000370085 SCN7AQ01118 1682 aa17.67■□□□□ 0.42
SSR4-202ENST00000370085 CAMTA2O94983 1202 aa17.67■□□□□ 0.42
SSR4-202ENST00000370085 MMP10P09238 476 aa17.67■□□□□ 0.42
SSR4-202ENST00000370085 PDIA6Q15084 440 aa17.67■□□□□ 0.42
SSR4-202ENST00000370085 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
SSR4-202ENST00000370085 MAP3K15Q6ZN16 1313 aa17.67■□□□□ 0.42
SSR4-202ENST00000370085 BCORQ6W2J9 1755 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms