RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ADRA2BP18089 450 aa29.51■■■□□ 2.31
ECHDC1-203ENST00000368291 ZBTB1Q9Y2K1 713 aa29.51■■■□□ 2.31
ECHDC1-203ENST00000368291 PRAMEF22A3QJZ6 481 aa29.5■■■□□ 2.31
ECHDC1-203ENST00000368291 PPP1R1BQ9UD71 204 aaPredicted RBP29.5■■■□□ 2.31
ECHDC1-203ENST00000368291 SOS1Q07889 1333 aaPredicted RBP29.49■■■□□ 2.31
ECHDC1-203ENST00000368291 TEX13AQ9BXU3 409 aaPredicted RBP29.49■■■□□ 2.31
ECHDC1-203ENST00000368291 LAMB4A4D0S4 1761 aa29.49■■■□□ 2.31
ECHDC1-203ENST00000368291 STARD3NLO95772 234 aa29.48■■■□□ 2.31
ECHDC1-203ENST00000368291 ARXQ96QS3 562 aa29.47■■■□□ 2.31
ECHDC1-203ENST00000368291 USP16Q9Y5T5 823 aa29.47■■■□□ 2.31
ECHDC1-203ENST00000368291 SNRPA1P09661 255 aaKnown RBP29.45■■■□□ 2.31
ECHDC1-203ENST00000368291 POLD1P28340 1107 aa29.45■■■□□ 2.31
ECHDC1-203ENST00000368291 EIF4A1P60842 406 aaKnown RBP29.45■■■□□ 2.31
ECHDC1-203ENST00000368291 RFC4P35249 363 aa29.43■■■□□ 2.3
ECHDC1-203ENST00000368291 COL15A1P39059 1388 aa29.42■■■□□ 2.3
ECHDC1-203ENST00000368291 A1BGP04217 495 aa29.42■■■□□ 2.3
ECHDC1-203ENST00000368291 GYS1P13807 737 aa29.42■■■□□ 2.3
ECHDC1-203ENST00000368291 CANXP27824 592 aaKnown RBP29.42■■■□□ 2.3
ECHDC1-203ENST00000368291 BABAM1Q9NWV8 329 aa29.42■■■□□ 2.3
ECHDC1-203ENST00000368291 TSPYL4Q9UJ04 414 aa29.42■■■□□ 2.3
ECHDC1-203ENST00000368291 EIF5P55010 431 aaKnown RBP29.41■■■□□ 2.3
ECHDC1-203ENST00000368291 FHDC1Q9C0D6 1143 aaPredicted RBP29.41■■■□□ 2.3
ECHDC1-203ENST00000368291 SRP68Q9UHB9 627 aaKnown RBP29.41■■■□□ 2.3
ECHDC1-203ENST00000368291 USP42Q9H9J4 1324 aaKnown RBP29.41■■■□□ 2.3
ECHDC1-203ENST00000368291 GIGYF1O75420 1035 aaPredicted RBP29.4■■■□□ 2.3
ECHDC1-203ENST00000368291 CHL1O00533 1208 aa29.39■■■□□ 2.3
ECHDC1-203ENST00000368291 SENP3-EIF4A1A0A087X0R7 540 aa29.39■■■□□ 2.29
ECHDC1-203ENST00000368291 SYT17Q9BSW7 474 aa29.38■■■□□ 2.29
ECHDC1-203ENST00000368291 IL6STP40189 918 aaPredicted RBP29.37■■■□□ 2.29
ECHDC1-203ENST00000368291 FAM9BQ8IZU0 186 aa29.37■■■□□ 2.29
ECHDC1-203ENST00000368291 NLGN1Q8N2Q7 840 aa29.37■■■□□ 2.29
ECHDC1-203ENST00000368291 PIP4K2AP48426 406 aaPredicted RBP29.36■■■□□ 2.29
ECHDC1-203ENST00000368291 SCN7AQ01118 1682 aa29.35■■■□□ 2.29
ECHDC1-203ENST00000368291 NARFQ9UHQ1 456 aa29.35■■■□□ 2.29
ECHDC1-203ENST00000368291 NBPF26B4DH59 902 aa29.34■■■□□ 2.29
ECHDC1-203ENST00000368291 MMP10P09238 476 aa29.34■■■□□ 2.29
ECHDC1-203ENST00000368291 ZNF853P0CG23 659 aa29.34■■■□□ 2.29
ECHDC1-203ENST00000368291 FKBP8Q14318 412 aa29.34■■■□□ 2.29
ECHDC1-203ENST00000368291 USPL1Q5W0Q7 1092 aa29.34■■■□□ 2.29
ECHDC1-203ENST00000368291 NBPF10Q6P3W6 841 aaKnown RBP29.34■■■□□ 2.29
ECHDC1-203ENST00000368291 NBPF15Q8N660 670 aa29.34■■■□□ 2.29
ECHDC1-203ENST00000368291 CFAP44Q96MT7 982 aa29.34■■■□□ 2.29
ECHDC1-203ENST00000368291 LAS1LQ9Y4W2 734 aaKnown RBP29.34■■■□□ 2.29
ECHDC1-203ENST00000368291 BCORQ6W2J9 1755 aa29.33■■■□□ 2.29
ECHDC1-203ENST00000368291 BCL2L12Q9HB09 334 aa29.33■■■□□ 2.29
ECHDC1-203ENST00000368291 ZPR1O75312 459 aa29.32■■■□□ 2.28
ECHDC1-203ENST00000368291 CCDC27Q2M243 656 aa29.32■■■□□ 2.28
ECHDC1-203ENST00000368291 KIF13BQ9NQT8 1826 aa29.31■■■□□ 2.28
ECHDC1-203ENST00000368291 KRT24Q2M2I5 525 aa29.3■■■□□ 2.28
ECHDC1-203ENST00000368291 NCBP3Q53F19 620 aaKnown RBP29.3■■■□□ 2.28
ECHDC1-203ENST00000368291 ZNF330Q9Y3S2 320 aaPredicted RBP29.3■■■□□ 2.28
ECHDC1-203ENST00000368291 A0A087WZG4 1122 aa29.29■■■□□ 2.28
ECHDC1-203ENST00000368291 WWC1Q8IX03 1113 aa29.29■■■□□ 2.28
ECHDC1-203ENST00000368291 MBIPQ9NS73 344 aa29.29■■■□□ 2.28
ECHDC1-203ENST00000368291 TBC1D2BQ9UPU7 963 aa29.29■■■□□ 2.28
ECHDC1-203ENST00000368291 AFDNP55196 1824 aaKnown RBP29.29■■■□□ 2.28
ECHDC1-203ENST00000368291 DIEXFQ68CQ4 756 aaKnown RBP29.28■■■□□ 2.28
ECHDC1-203ENST00000368291 KLHL34Q8N239 644 aa29.28■■■□□ 2.28
ECHDC1-203ENST00000368291 IFT57Q9NWB7 429 aa29.28■■■□□ 2.28
ECHDC1-203ENST00000368291 CCER2I3L3R5 266 aa29.27■■■□□ 2.28
ECHDC1-203ENST00000368291 TM4SF1P30408 202 aa29.27■■■□□ 2.28
ECHDC1-203ENST00000368291 CALD1Q05682 793 aaKnown RBP29.26■■■□□ 2.28
ECHDC1-203ENST00000368291 NLGN2Q8NFZ4 835 aa29.26■■■□□ 2.28
ECHDC1-203ENST00000368291 GNAI1P63096 354 aa29.26■■■□□ 2.27
ECHDC1-203ENST00000368291 DDR1Q08345 913 aa29.26■■■□□ 2.27
ECHDC1-203ENST00000368291 CAMTA2O94983 1202 aa29.25■■■□□ 2.27
ECHDC1-203ENST00000368291 DZIP3Q86Y13 1208 aaKnown RBP29.25■■■□□ 2.27
ECHDC1-203ENST00000368291 NRXN2Q9P2S2 1712 aa29.25■■■□□ 2.27
ECHDC1-203ENST00000368291 KIAA1551Q9HCM1 1747 aa29.24■■■□□ 2.27
ECHDC1-203ENST00000368291 CD2APQ9Y5K6 639 aa29.24■■■□□ 2.27
ECHDC1-203ENST00000368291 NFIXQ14938 502 aa29.23■■■□□ 2.27
ECHDC1-203ENST00000368291 SALL2Q9Y467 1007 aaPredicted RBP29.23■■■□□ 2.27
ECHDC1-203ENST00000368291 PARP3Q9Y6F1 533 aa29.23■■■□□ 2.27
ECHDC1-203ENST00000368291 POLRMTO00411 1230 aaKnown RBP29.22■■■□□ 2.27
ECHDC1-203ENST00000368291 EIF2S2P20042 333 aaKnown RBP29.22■■■□□ 2.27
ECHDC1-203ENST00000368291 PDIA6Q15084 440 aa29.22■■■□□ 2.27
ECHDC1-203ENST00000368291 NUP98P52948 1817 aa29.21■■■□□ 2.27
ECHDC1-203ENST00000368291 LRP10Q7Z4F1 713 aa29.21■■■□□ 2.27
ECHDC1-203ENST00000368291 NPM2Q86SE8 214 aaKnown RBP29.21■■■□□ 2.27
ECHDC1-203ENST00000368291 ERBB4Q15303 1308 aa29.2■■■□□ 2.27
ECHDC1-203ENST00000368291 C10orf71Q711Q0 1435 aa29.2■■■□□ 2.27
ECHDC1-203ENST00000368291 MYL6BP14649 208 aa29.19■■■□□ 2.26
ECHDC1-203ENST00000368291 TBC1D9BQ66K14 1250 aa29.19■■■□□ 2.26
ECHDC1-203ENST00000368291 N4BP2Q86UW6 1770 aaPredicted RBP29.19■■■□□ 2.26
ECHDC1-203ENST00000368291 MIER1Q8N108 512 aa29.18■■■□□ 2.26
ECHDC1-203ENST00000368291 IL16Q14005 1332 aa29.18■■■□□ 2.26
ECHDC1-203ENST00000368291 PROSER3Q2NL68 480 aa29.17■■■□□ 2.26
ECHDC1-203ENST00000368291 DUSP27Q5VZP5 1158 aa29.17■■■□□ 2.26
ECHDC1-203ENST00000368291 NGEFQ8N5V2 710 aa29.17■■■□□ 2.26
ECHDC1-203ENST00000368291 NECTIN2Q92692 538 aa29.17■■■□□ 2.26
ECHDC1-203ENST00000368291 HOXB7P09629 217 aa29.16■■■□□ 2.26
ECHDC1-203ENST00000368291 ANXA1P04083 346 aa29.15■■■□□ 2.26
ECHDC1-203ENST00000368291 BICDL1Q6ZP65 573 aa29.15■■■□□ 2.26
ECHDC1-203ENST00000368291 TTLL7Q6ZT98 887 aa29.15■■■□□ 2.26
ECHDC1-203ENST00000368291 WDR63Q8IWG1 891 aa29.14■■■□□ 2.26
ECHDC1-203ENST00000368291 C8orf58Q8NAV2 365 aa29.14■■■□□ 2.26
ECHDC1-203ENST00000368291 TSR2Q969E8 191 aaKnown RBP29.14■■■□□ 2.26
ECHDC1-203ENST00000368291 BRCA1P38398 1863 aaKnown RBP29.14■■■□□ 2.25
ECHDC1-203ENST00000368291 SERPINB2P05120 415 aa29.13■■■□□ 2.25
ECHDC1-203ENST00000368291 CLEC4GQ6UXB4 293 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms