RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 BABAM1Q9NWV8 329 aa16.56■□□□□ 0.24
LMX1A-203ENST00000367893 KDM3BQ7LBC6 1761 aa16.55■□□□□ 0.24
LMX1A-203ENST00000367893 YBX3P16989 372 aaKnown RBP eCLIP16.55■□□□□ 0.24
LMX1A-203ENST00000367893 CHL1O00533 1208 aa16.54■□□□□ 0.24
LMX1A-203ENST00000367893 GNPATO15228 680 aa16.54■□□□□ 0.24
LMX1A-203ENST00000367893 GNAI1P63096 354 aa16.54■□□□□ 0.24
LMX1A-203ENST00000367893 TAF7Q15545 349 aaPredicted RBP16.54■□□□□ 0.24
LMX1A-203ENST00000367893 CD2APQ9Y5K6 639 aa16.54■□□□□ 0.24
LMX1A-203ENST00000367893 UBR3Q6ZT12 1888 aa16.54■□□□□ 0.24
LMX1A-203ENST00000367893 DUSP27Q5VZP5 1158 aa16.53■□□□□ 0.24
LMX1A-203ENST00000367893 SLC52A2Q9HAB3 445 aa16.53■□□□□ 0.24
LMX1A-203ENST00000367893 CABP4P57796 275 aa16.52■□□□□ 0.24
LMX1A-203ENST00000367893 TEFQ10587 303 aa16.52■□□□□ 0.24
LMX1A-203ENST00000367893 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
LMX1A-203ENST00000367893 MYH16Q9H6N6 1097 aa16.51■□□□□ 0.23
LMX1A-203ENST00000367893 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
LMX1A-203ENST00000367893 NFATC2IPQ8NCF5 419 aa16.5■□□□□ 0.23
LMX1A-203ENST00000367893 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
LMX1A-203ENST00000367893 MBIPQ9NS73 344 aa16.5■□□□□ 0.23
LMX1A-203ENST00000367893 ZNF831Q5JPB2 1677 aa16.5■□□□□ 0.23
LMX1A-203ENST00000367893 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
LMX1A-203ENST00000367893 FANCIQ9NVI1 1328 aa16.5■□□□□ 0.23
LMX1A-203ENST00000367893 UBR2Q8IWV8 1755 aa16.49■□□□□ 0.23
LMX1A-203ENST00000367893 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
LMX1A-203ENST00000367893 BTBD11A6QL63 1104 aa16.47■□□□□ 0.23
LMX1A-203ENST00000367893 GRIN3BO60391 1043 aa16.47■□□□□ 0.23
LMX1A-203ENST00000367893 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
LMX1A-203ENST00000367893 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
LMX1A-203ENST00000367893 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
LMX1A-203ENST00000367893 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
LMX1A-203ENST00000367893 PTCD1O75127 700 aaKnown RBP16.46■□□□□ 0.23
LMX1A-203ENST00000367893 RPS6KA4O75676 772 aa16.46■□□□□ 0.23
LMX1A-203ENST00000367893 ADRA2BP18089 450 aa16.46■□□□□ 0.23
LMX1A-203ENST00000367893 TRAPPC3LQ5T215 181 aa16.46■□□□□ 0.23
LMX1A-203ENST00000367893 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.23
LMX1A-203ENST00000367893 MMP10P09238 476 aa16.45■□□□□ 0.22
LMX1A-203ENST00000367893 ZNF790Q6PG37 636 aa16.45■□□□□ 0.22
LMX1A-203ENST00000367893 HEG1Q9ULI3 1381 aa16.45■□□□□ 0.22
LMX1A-203ENST00000367893 GYS1P13807 737 aa16.45■□□□□ 0.22
LMX1A-203ENST00000367893 COL5A3P25940 1745 aaPredicted RBP16.44■□□□□ 0.22
LMX1A-203ENST00000367893 KCPQ6ZWJ8 1503 aa16.44■□□□□ 0.22
LMX1A-203ENST00000367893 KCNQ3O43525 872 aa16.44■□□□□ 0.22
LMX1A-203ENST00000367893 CT47B1P0C2W7 299 aaPredicted RBP16.44■□□□□ 0.22
LMX1A-203ENST00000367893 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
LMX1A-203ENST00000367893 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
LMX1A-203ENST00000367893 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
LMX1A-203ENST00000367893 CICQ96RK0 1608 aaPredicted RBP16.43■□□□□ 0.22
LMX1A-203ENST00000367893 SOS1Q07889 1333 aaPredicted RBP16.43■□□□□ 0.22
LMX1A-203ENST00000367893 CENPBP07199 599 aaPredicted RBP16.43■□□□□ 0.22
LMX1A-203ENST00000367893 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
LMX1A-203ENST00000367893 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
LMX1A-203ENST00000367893 C10orf71Q711Q0 1435 aa16.42■□□□□ 0.22
LMX1A-203ENST00000367893 CHD4Q14839 1912 aa16.42■□□□□ 0.22
LMX1A-203ENST00000367893 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
LMX1A-203ENST00000367893 C8orf58Q8NAV2 365 aa16.42■□□□□ 0.22
LMX1A-203ENST00000367893 PXDNLA1KZ92 1463 aa16.41■□□□□ 0.22
LMX1A-203ENST00000367893 DNAJC10Q8IXB1 793 aa16.41■□□□□ 0.22
LMX1A-203ENST00000367893 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
LMX1A-203ENST00000367893 TJP1Q07157 1748 aa16.4■□□□□ 0.22
LMX1A-203ENST00000367893 ADCY9O60503 1353 aa16.4■□□□□ 0.22
LMX1A-203ENST00000367893 VAMP4O75379 141 aa16.4■□□□□ 0.22
LMX1A-203ENST00000367893 HOXB7P09629 217 aa16.4■□□□□ 0.22
LMX1A-203ENST00000367893 RFC4P35249 363 aa16.4■□□□□ 0.22
LMX1A-203ENST00000367893 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
LMX1A-203ENST00000367893 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
LMX1A-203ENST00000367893 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
LMX1A-203ENST00000367893 SRP68Q9UHB9 627 aaKnown RBP16.4■□□□□ 0.22
LMX1A-203ENST00000367893 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
LMX1A-203ENST00000367893 USP42Q9H9J4 1324 aaKnown RBP16.39■□□□□ 0.21
LMX1A-203ENST00000367893 MYH14Q7Z406 1995 aaKnown RBP16.39■□□□□ 0.21
LMX1A-203ENST00000367893 TWISTNBQ3B726 338 aaPredicted RBP16.39■□□□□ 0.21
LMX1A-203ENST00000367893 ZNF428Q96B54 188 aa16.39■□□□□ 0.21
LMX1A-203ENST00000367893 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
LMX1A-203ENST00000367893 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
LMX1A-203ENST00000367893 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
LMX1A-203ENST00000367893 CYP19A1P11511 503 aaPredicted RBP16.38■□□□□ 0.21
LMX1A-203ENST00000367893 C1QTNF8P60827 252 aa16.38■□□□□ 0.21
LMX1A-203ENST00000367893 TGFB2P61812 414 aa16.38■□□□□ 0.21
LMX1A-203ENST00000367893 FKBP8Q14318 412 aa16.38■□□□□ 0.21
LMX1A-203ENST00000367893 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
LMX1A-203ENST00000367893 DDR1Q08345 913 aa16.37■□□□□ 0.21
LMX1A-203ENST00000367893 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
LMX1A-203ENST00000367893 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
LMX1A-203ENST00000367893 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
LMX1A-203ENST00000367893 KIAA1551Q9HCM1 1747 aa16.37■□□□□ 0.21
LMX1A-203ENST00000367893 C4AP0C0L4 1744 aa16.36■□□□□ 0.21
LMX1A-203ENST00000367893 A0A0G2JLW4 131 aa16.35■□□□□ 0.21
LMX1A-203ENST00000367893 ELL2O00472 640 aaPredicted RBP16.35■□□□□ 0.21
LMX1A-203ENST00000367893 SNRPA1P09661 255 aaKnown RBP16.35■□□□□ 0.21
LMX1A-203ENST00000367893 KCNA3P22001 575 aa16.35■□□□□ 0.21
LMX1A-203ENST00000367893 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
LMX1A-203ENST00000367893 RCAN3Q9UKA8 241 aa16.35■□□□□ 0.21
LMX1A-203ENST00000367893 PARP3Q9Y6F1 533 aa16.35■□□□□ 0.21
LMX1A-203ENST00000367893 KIF13BQ9NQT8 1826 aa16.34■□□□□ 0.21
LMX1A-203ENST00000367893 TM4SF1P30408 202 aa16.34■□□□□ 0.21
LMX1A-203ENST00000367893 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
LMX1A-203ENST00000367893 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
LMX1A-203ENST00000367893 DPEP1P16444 411 aa16.33■□□□□ 0.2
LMX1A-203ENST00000367893 BRPF1P55201 1214 aaPredicted RBP16.33■□□□□ 0.2
LMX1A-203ENST00000367893 CHMP4AQ9BY43 222 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms