RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 CANXP27824 592 aaKnown RBP26.17■■□□□ 1.78
H3F3A-204ENST00000366816 RFC4P35249 363 aa26.17■■□□□ 1.78
H3F3A-204ENST00000366816 FHDC1Q9C0D6 1143 aaPredicted RBP26.17■■□□□ 1.78
H3F3A-204ENST00000366816 TRIM35Q9UPQ4 493 aa26.17■■□□□ 1.78
H3F3A-204ENST00000366816 SENP3-EIF4A1A0A087X0R7 540 aa26.16■■□□□ 1.78
H3F3A-204ENST00000366816 STARD3NLO95772 234 aa26.16■■□□□ 1.78
H3F3A-204ENST00000366816 ADRA2BP18089 450 aa26.16■■□□□ 1.78
H3F3A-204ENST00000366816 USP16Q9Y5T5 823 aa26.16■■□□□ 1.78
H3F3A-204ENST00000366816 LMOD3Q0VAK6 560 aa26.15■■□□□ 1.78
H3F3A-204ENST00000366816 TEX13AQ9BXU3 409 aaPredicted RBP26.15■■□□□ 1.78
H3F3A-204ENST00000366816 SRP68Q9UHB9 627 aaKnown RBP26.15■■□□□ 1.78
H3F3A-204ENST00000366816 COL24A1Q17RW2 1714 aa26.14■■□□□ 1.78
H3F3A-204ENST00000366816 KLHL34Q8N239 644 aa26.14■■□□□ 1.78
H3F3A-204ENST00000366816 SOS1Q07889 1333 aaPredicted RBP26.14■■□□□ 1.77
H3F3A-204ENST00000366816 A1BGP04217 495 aa26.13■■□□□ 1.77
H3F3A-204ENST00000366816 SNRPA1P09661 255 aaKnown RBP26.13■■□□□ 1.77
H3F3A-204ENST00000366816 SYT17Q9BSW7 474 aa26.12■■□□□ 1.77
H3F3A-204ENST00000366816 GYS1P13807 737 aa26.11■■□□□ 1.77
H3F3A-204ENST00000366816 TSPYL4Q9UJ04 414 aa26.11■■□□□ 1.77
H3F3A-204ENST00000366816 PIP4K2AP48426 406 aaPredicted RBP26.1■■□□□ 1.77
H3F3A-204ENST00000366816 EIF4A1P60842 406 aaKnown RBP26.1■■□□□ 1.77
H3F3A-204ENST00000366816 ZNF330Q9Y3S2 320 aaPredicted RBP26.1■■□□□ 1.77
H3F3A-204ENST00000366816 C4AP0C0L4 1744 aa26.09■■□□□ 1.77
H3F3A-204ENST00000366816 LAS1LQ9Y4W2 734 aaKnown RBP26.09■■□□□ 1.77
H3F3A-204ENST00000366816 NLGN1Q8N2Q7 840 aa26.08■■□□□ 1.77
H3F3A-204ENST00000366816 USP42Q9H9J4 1324 aaKnown RBP26.08■■□□□ 1.77
H3F3A-204ENST00000366816 COL15A1P39059 1388 aa26.07■■□□□ 1.76
H3F3A-204ENST00000366816 KDM3BQ7LBC6 1761 aa26.07■■□□□ 1.76
H3F3A-204ENST00000366816 MMP10P09238 476 aa26.07■■□□□ 1.76
H3F3A-204ENST00000366816 EIF5P55010 431 aaKnown RBP26.07■■□□□ 1.76
H3F3A-204ENST00000366816 USPL1Q5W0Q7 1092 aa26.07■■□□□ 1.76
H3F3A-204ENST00000366816 ZPR1O75312 459 aa26.06■■□□□ 1.76
H3F3A-204ENST00000366816 GIGYF1O75420 1035 aaPredicted RBP26.06■■□□□ 1.76
H3F3A-204ENST00000366816 FKBP8Q14318 412 aa26.06■■□□□ 1.76
H3F3A-204ENST00000366816 FAM9BQ8IZU0 186 aa26.05■■□□□ 1.76
H3F3A-204ENST00000366816 NARFQ9UHQ1 456 aa26.04■■□□□ 1.76
H3F3A-204ENST00000366816 CHL1O00533 1208 aa26.03■■□□□ 1.76
H3F3A-204ENST00000366816 IL6STP40189 918 aaPredicted RBP26.03■■□□□ 1.76
H3F3A-204ENST00000366816 NLGN2Q8NFZ4 835 aa26.03■■□□□ 1.76
H3F3A-204ENST00000366816 TBC1D2BQ9UPU7 963 aa26.03■■□□□ 1.76
H3F3A-204ENST00000366816 NBPF26B4DH59 902 aa26.02■■□□□ 1.76
H3F3A-204ENST00000366816 NBPF10Q6P3W6 841 aaKnown RBP26.02■■□□□ 1.76
H3F3A-204ENST00000366816 NBPF15Q8N660 670 aa26.02■■□□□ 1.76
H3F3A-204ENST00000366816 BCL2L12Q9HB09 334 aa26.02■■□□□ 1.76
H3F3A-204ENST00000366816 BABAM1Q9NWV8 329 aa26.02■■□□□ 1.76
H3F3A-204ENST00000366816 A0A087WZG4 1122 aa26■■□□□ 1.75
H3F3A-204ENST00000366816 KRT24Q2M2I5 525 aa26■■□□□ 1.75
H3F3A-204ENST00000366816 NPM2Q86SE8 214 aaKnown RBP25.98■■□□□ 1.75
H3F3A-204ENST00000366816 CFAP44Q96MT7 982 aa25.98■■□□□ 1.75
H3F3A-204ENST00000366816 SALL2Q9Y467 1007 aaPredicted RBP25.98■■□□□ 1.75
H3F3A-204ENST00000366816 PARP3Q9Y6F1 533 aa25.98■■□□□ 1.75
H3F3A-204ENST00000366816 TM4SF1P30408 202 aa25.97■■□□□ 1.75
H3F3A-204ENST00000366816 DDR1Q08345 913 aa25.97■■□□□ 1.75
H3F3A-204ENST00000366816 CD2APQ9Y5K6 639 aa25.97■■□□□ 1.75
H3F3A-204ENST00000366816 EIF2S2P20042 333 aaKnown RBP25.96■■□□□ 1.75
H3F3A-204ENST00000366816 DZIP3Q86Y13 1208 aaKnown RBP25.96■■□□□ 1.75
H3F3A-204ENST00000366816 NGEFQ8N5V2 710 aa25.96■■□□□ 1.75
H3F3A-204ENST00000366816 MBIPQ9NS73 344 aa25.96■■□□□ 1.75
H3F3A-204ENST00000366816 ZNF853P0CG23 659 aa25.95■■□□□ 1.74
H3F3A-204ENST00000366816 NFIXQ14938 502 aa25.95■■□□□ 1.74
H3F3A-204ENST00000366816 CAMTA2O94983 1202 aa25.94■■□□□ 1.74
H3F3A-204ENST00000366816 MYL6BP14649 208 aa25.94■■□□□ 1.74
H3F3A-204ENST00000366816 BICDL1Q6ZP65 573 aa25.94■■□□□ 1.74
H3F3A-204ENST00000366816 NECTIN2Q92692 538 aa25.94■■□□□ 1.74
H3F3A-204ENST00000366816 LAMB4A4D0S4 1761 aa25.93■■□□□ 1.74
H3F3A-204ENST00000366816 DCAF8L1A6NGE4 600 aa25.93■■□□□ 1.74
H3F3A-204ENST00000366816 POLRMTO00411 1230 aaKnown RBP25.93■■□□□ 1.74
H3F3A-204ENST00000366816 WWC1Q8IX03 1113 aa25.93■■□□□ 1.74
H3F3A-204ENST00000366816 CALD1Q05682 793 aaKnown RBP25.92■■□□□ 1.74
H3F3A-204ENST00000366816 TBC1D9BQ66K14 1250 aa25.92■■□□□ 1.74
H3F3A-204ENST00000366816 IFT57Q9NWB7 429 aa25.92■■□□□ 1.74
H3F3A-204ENST00000366816 GNAI1P63096 354 aa25.91■■□□□ 1.74
H3F3A-204ENST00000366816 CCDC27Q2M243 656 aa25.91■■□□□ 1.74
H3F3A-204ENST00000366816 PELP1Q8IZL8 1130 aaKnown RBP25.91■■□□□ 1.74
H3F3A-204ENST00000366816 WWC3Q9ULE0 1092 aa25.9■■□□□ 1.74
H3F3A-204ENST00000366816 ANXA1P04083 346 aa25.89■■□□□ 1.74
H3F3A-204ENST00000366816 PDIA6Q15084 440 aa25.89■■□□□ 1.74
H3F3A-204ENST00000366816 DIEXFQ68CQ4 756 aaKnown RBP25.89■■□□□ 1.74
H3F3A-204ENST00000366816 GPR162Q16538 588 aa25.88■■□□□ 1.73
H3F3A-204ENST00000366816 PROSER3Q2NL68 480 aa25.88■■□□□ 1.73
H3F3A-204ENST00000366816 ELL2O00472 640 aaPredicted RBP25.87■■□□□ 1.73
H3F3A-204ENST00000366816 SERPINB2P05120 415 aa25.87■■□□□ 1.73
H3F3A-204ENST00000366816 DUSP27Q5VZP5 1158 aa25.87■■□□□ 1.73
H3F3A-204ENST00000366816 TTLL7Q6ZT98 887 aa25.87■■□□□ 1.73
H3F3A-204ENST00000366816 HLFQ16534 295 aa25.86■■□□□ 1.73
H3F3A-204ENST00000366816 TSR2Q969E8 191 aaKnown RBP25.86■■□□□ 1.73
H3F3A-204ENST00000366816 C10orf71Q711Q0 1435 aa25.86■■□□□ 1.73
H3F3A-204ENST00000366816 SCN7AQ01118 1682 aa25.86■■□□□ 1.73
H3F3A-204ENST00000366816 A0A0G2JLW4 131 aa25.85■■□□□ 1.73
H3F3A-204ENST00000366816 CCER2I3L3R5 266 aa25.84■■□□□ 1.73
H3F3A-204ENST00000366816 YBX3P16989 372 aaKnown RBP eCLIP25.84■■□□□ 1.739e-12■■■□□ 16.6
H3F3A-204ENST00000366816 LRP10Q7Z4F1 713 aa25.84■■□□□ 1.73
H3F3A-204ENST00000366816 ERBB4Q15303 1308 aa25.84■■□□□ 1.73
H3F3A-204ENST00000366816 NCBP3Q53F19 620 aaKnown RBP25.83■■□□□ 1.73
H3F3A-204ENST00000366816 HDGFL1Q5TGJ6 251 aa25.83■■□□□ 1.73
H3F3A-204ENST00000366816 MIER1Q8N108 512 aa25.83■■□□□ 1.73
H3F3A-204ENST00000366816 CCDC24Q8N4L8 307 aa25.83■■□□□ 1.73
H3F3A-204ENST00000366816 C8orf58Q8NAV2 365 aa25.83■■□□□ 1.73
H3F3A-204ENST00000366816 SETDB2Q96T68 719 aa25.83■■□□□ 1.73
H3F3A-204ENST00000366816 DPEP1P16444 411 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms