RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 IFFO2Q5TF58 517 aa8.15□□□□□ -1.1
RPL39-201ENST00000361575 TRIM52Q96A61 297 aa8.15□□□□□ -1.1
RPL39-201ENST00000361575 VTI1AQ96AJ9 217 aa8.15□□□□□ -1.1
RPL39-201ENST00000361575 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
RPL39-201ENST00000361575 HIRAP54198 1017 aaPredicted RBP8.14□□□□□ -1.11
RPL39-201ENST00000361575 COL19A1Q14993 1142 aa8.14□□□□□ -1.11
RPL39-201ENST00000361575 ZSCAN29Q8IWY8 852 aaPredicted RBP8.14□□□□□ -1.11
RPL39-201ENST00000361575 AGBL1Q96MI9 1066 aa8.14□□□□□ -1.11
RPL39-201ENST00000361575 ZFAND3Q9H8U3 227 aa8.14□□□□□ -1.11
RPL39-201ENST00000361575 STIM2Q9P246 746 aa8.14□□□□□ -1.11
RPL39-201ENST00000361575 TREHO43280 583 aa8.13□□□□□ -1.11
RPL39-201ENST00000361575 VAMP1P23763 118 aa8.13□□□□□ -1.11
RPL39-201ENST00000361575 PTGIRP43119 386 aa8.13□□□□□ -1.11
RPL39-201ENST00000361575 CENPCQ03188 943 aa8.13□□□□□ -1.11
RPL39-201ENST00000361575 FMR1Q06787 632 aaKnown RBP eCLIP8.13□□□□□ -1.11
RPL39-201ENST00000361575 TEAD4Q15561 434 aa8.13□□□□□ -1.11
RPL39-201ENST00000361575 ZNF697Q5TEC3 545 aa8.13□□□□□ -1.11
RPL39-201ENST00000361575 DSC3Q14574 896 aa8.12□□□□□ -1.11
RPL39-201ENST00000361575 ZNF598Q86UK7 904 aaKnown RBP8.12□□□□□ -1.11
RPL39-201ENST00000361575 ATCAYQ86WG3 371 aa8.12□□□□□ -1.11
RPL39-201ENST00000361575 J3QL48 77 aa8.11□□□□□ -1.11
RPL39-201ENST00000361575 GPR182O15218 404 aa8.11□□□□□ -1.11
RPL39-201ENST00000361575 ZIC2O95409 532 aaPredicted RBP8.11□□□□□ -1.11
RPL39-201ENST00000361575 RECKO95980 971 aa8.11□□□□□ -1.11
RPL39-201ENST00000361575 TIMP2P16035 220 aa8.11□□□□□ -1.11
RPL39-201ENST00000361575 NOS2P35228 1153 aa8.11□□□□□ -1.11
RPL39-201ENST00000361575 FOXC1Q12948 553 aa8.11□□□□□ -1.11
RPL39-201ENST00000361575 ZNF326Q5BKZ1 582 aaKnown RBP8.11□□□□□ -1.11
RPL39-201ENST00000361575 ETFBKMTQ8IXQ9 262 aa8.11□□□□□ -1.11
RPL39-201ENST00000361575 FAM129BQ96TA1 746 aa8.11□□□□□ -1.11
RPL39-201ENST00000361575 PARP3Q9Y6F1 533 aa8.11□□□□□ -1.11
RPL39-201ENST00000361575 SERTM1A2A2V5 107 aa8.1□□□□□ -1.11
RPL39-201ENST00000361575 NDUFB5O43674 189 aa8.1□□□□□ -1.11
RPL39-201ENST00000361575 EAPPQ56P03 285 aaPredicted RBP8.1□□□□□ -1.11
RPL39-201ENST00000361575 PPARGC1BQ86YN6 1023 aaKnown RBP8.1□□□□□ -1.11
RPL39-201ENST00000361575 ALDH16A1Q8IZ83 802 aa8.1□□□□□ -1.11
RPL39-201ENST00000361575 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
RPL39-201ENST00000361575 L3MBTL2Q969R5 705 aa8.1□□□□□ -1.11
RPL39-201ENST00000361575 NGLY1Q96IV0 654 aa8.1□□□□□ -1.11
RPL39-201ENST00000361575 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.1□□□□□ -1.11
RPL39-201ENST00000361575 BRPF3Q9ULD4 1205 aa8.1□□□□□ -1.11
RPL39-201ENST00000361575 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
RPL39-201ENST00000361575 MEN1O00255 615 aa8.09□□□□□ -1.11
RPL39-201ENST00000361575 RELBQ01201 579 aa8.09□□□□□ -1.11
RPL39-201ENST00000361575 HCN4Q9Y3Q4 1203 aa8.09□□□□□ -1.11
RPL39-201ENST00000361575 GDF9O60383 454 aa8.08□□□□□ -1.12
RPL39-201ENST00000361575 TCF3P15923 654 aa8.08□□□□□ -1.12
RPL39-201ENST00000361575 WDR4P57081 412 aaKnown RBP8.08□□□□□ -1.12
RPL39-201ENST00000361575 RTN1Q16799 776 aa8.08□□□□□ -1.12
RPL39-201ENST00000361575 NBPF15Q8N660 670 aa8.08□□□□□ -1.12
RPL39-201ENST00000361575 KLRG1Q96E93 195 aa8.08□□□□□ -1.12
RPL39-201ENST00000361575 CITED4Q96RK1 184 aa8.08□□□□□ -1.12
RPL39-201ENST00000361575 ZNF395Q9H8N7 513 aaPredicted RBP8.08□□□□□ -1.12
RPL39-201ENST00000361575 RNF19AQ9NV58 838 aa8.08□□□□□ -1.12
RPL39-201ENST00000361575 CABP1Q9NZU7 370 aa8.08□□□□□ -1.12
RPL39-201ENST00000361575 KLK14Q9P0G3 267 aa8.08□□□□□ -1.12
RPL39-201ENST00000361575 SMPD1P17405 629 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 TXLNAP40222 546 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 DGKZQ13574 1117 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 MRPL58Q14197 206 aaKnown RBP8.07□□□□□ -1.12
RPL39-201ENST00000361575 LDLRAD1Q5T700 205 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 ALKBH2Q6NS38 261 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 GJD3Q8N144 294 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 C7orf43Q8WVR3 580 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 SETDB2Q96T68 719 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 PRKD2Q9BZL6 878 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 PHACTR1Q9C0D0 580 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 TOR4AQ9NXH8 423 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 ZNF232Q9UNY5 417 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 BCS1LQ9Y276 419 aa8.07□□□□□ -1.12
RPL39-201ENST00000361575 A0A0G2JS52 829 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 LOC105371045A0A1W2PR82 267 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 BRD2P25440 801 aaKnown RBP8.06□□□□□ -1.12
RPL39-201ENST00000361575 EHHADHQ08426 723 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 MMRN1Q13201 1228 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 C11orf91Q3C1V1 193 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 TRIM67Q6ZTA4 783 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 MEIOBQ8N635 442 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 ABTB2Q8N961 1025 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 ZSCAN10Q96SZ4 725 aaPredicted RBP8.06□□□□□ -1.12
RPL39-201ENST00000361575 GRIP2Q9C0E4 1043 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 POLIQ9UNA4 740 aa8.06□□□□□ -1.12
RPL39-201ENST00000361575 ALKBH8Q96BT7 664 aaKnown RBP8.05□□□□□ -1.12
RPL39-201ENST00000361575 DMRTB1Q96MA1 342 aa8.05□□□□□ -1.12
RPL39-201ENST00000361575 NLRP3Q96P20 1036 aa8.05□□□□□ -1.12
RPL39-201ENST00000361575 WWC3Q9ULE0 1092 aa8.05□□□□□ -1.12
RPL39-201ENST00000361575 CHMP3Q9Y3E7 222 aa8.05□□□□□ -1.12
RPL39-201ENST00000361575 ZAP70P43403 619 aa8.04□□□□□ -1.12
RPL39-201ENST00000361575 AAMPQ13685 434 aa8.04□□□□□ -1.12
RPL39-201ENST00000361575 RHBDD1Q8TEB9 315 aa8.04□□□□□ -1.12
RPL39-201ENST00000361575 IFT43Q96FT9 208 aa8.04□□□□□ -1.12
RPL39-201ENST00000361575 NIFKQ9BYG3 293 aaKnown RBP8.04□□□□□ -1.12
RPL39-201ENST00000361575 TNFRSF10AO00220 468 aa8.03□□□□□ -1.12
RPL39-201ENST00000361575 PDGFAP04085 211 aa8.03□□□□□ -1.12
RPL39-201ENST00000361575 C4orf17Q53FE4 359 aa8.03□□□□□ -1.12
RPL39-201ENST00000361575 C1orf53Q5VUE5 145 aa8.03□□□□□ -1.12
RPL39-201ENST00000361575 TMC1Q8TDI8 760 aa8.03□□□□□ -1.12
RPL39-201ENST00000361575 EDEM1Q92611 657 aa8.03□□□□□ -1.12
RPL39-201ENST00000361575 HPS1Q92902 700 aa8.03□□□□□ -1.12
RPL39-201ENST00000361575 FAM161BQ96MY7 647 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms