RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 C5P01031 1676 aa8.35□□□□□ -1.07
SUDS3-201ENST00000360286 PHF14O94880 888 aa8.35□□□□□ -1.07
SUDS3-201ENST00000360286 EIF2S2P20042 333 aaKnown RBP8.35□□□□□ -1.07
SUDS3-201ENST00000360286 CANXP27824 592 aaKnown RBP8.35□□□□□ -1.07
SUDS3-201ENST00000360286 PIP4K2AP48426 406 aaPredicted RBP8.35□□□□□ -1.07
SUDS3-201ENST00000360286 RC3H1Q5TC82 1133 aaKnown RBP8.35□□□□□ -1.07
SUDS3-201ENST00000360286 C8orf58Q8NAV2 365 aa8.35□□□□□ -1.07
SUDS3-201ENST00000360286 TEX13AQ9BXU3 409 aaPredicted RBP8.35□□□□□ -1.07
SUDS3-201ENST00000360286 C4BP0C0L5 1744 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 PNPLA7Q6ZV29 1317 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 CNTNAP4Q9C0A0 1308 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 GNPATO15228 680 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 MSH5O43196 834 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 RPS6KA4O75676 772 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 STARD3NLO95772 234 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 GOLGA2Q08379 1002 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 DUSP27Q5VZP5 1158 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 COL23A1Q86Y22 540 aaPredicted RBP8.34□□□□□ -1.07
SUDS3-201ENST00000360286 TSPYL6Q8N831 410 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 ZBTB1Q9Y2K1 713 aa8.34□□□□□ -1.07
SUDS3-201ENST00000360286 COL5A3P25940 1745 aaPredicted RBP8.34□□□□□ -1.07
SUDS3-201ENST00000360286 TUBGCP6Q96RT7 1819 aa8.33□□□□□ -1.08
SUDS3-201ENST00000360286 NBPF26B4DH59 902 aa8.33□□□□□ -1.08
SUDS3-201ENST00000360286 EXOSC9Q06265 439 aaKnown RBP8.33□□□□□ -1.08
SUDS3-201ENST00000360286 SLFN5Q08AF3 891 aa8.33□□□□□ -1.08
SUDS3-201ENST00000360286 TRAPPC3LQ5T215 181 aa8.33□□□□□ -1.08
SUDS3-201ENST00000360286 NBPF10Q6P3W6 841 aaKnown RBP8.33□□□□□ -1.08
SUDS3-201ENST00000360286 NBPF15Q8N660 670 aa8.33□□□□□ -1.08
SUDS3-201ENST00000360286 ARHGEF1Q92888 912 aaKnown RBP8.33□□□□□ -1.08
SUDS3-201ENST00000360286 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
SUDS3-201ENST00000360286 FANCIQ9NVI1 1328 aa8.32□□□□□ -1.08
SUDS3-201ENST00000360286 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
SUDS3-201ENST00000360286 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.32□□□□□ -1.08
SUDS3-201ENST00000360286 TCERG1O14776 1098 aaKnown RBP8.32□□□□□ -1.08
SUDS3-201ENST00000360286 ANXA1P04083 346 aa8.32□□□□□ -1.08
SUDS3-201ENST00000360286 MYL6BP14649 208 aa8.32□□□□□ -1.08
SUDS3-201ENST00000360286 HMGB2P26583 209 aaKnown RBP8.32□□□□□ -1.08
SUDS3-201ENST00000360286 MYH16Q9H6N6 1097 aa8.32□□□□□ -1.08
SUDS3-201ENST00000360286 ZNF330Q9Y3S2 320 aaPredicted RBP8.32□□□□□ -1.08
SUDS3-201ENST00000360286 SOS1Q07889 1333 aaPredicted RBP8.31□□□□□ -1.08
SUDS3-201ENST00000360286 E9PSI1 815 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 VAMP4O75379 141 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 ZBTB7AO95365 584 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 ADRA2BP18089 450 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 SSFA2P28290 1259 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 EIF5P55010 431 aaKnown RBP8.31□□□□□ -1.08
SUDS3-201ENST00000360286 PDIA6Q15084 440 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 PROSER3Q2NL68 480 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 TWISTNBQ3B726 338 aaPredicted RBP8.31□□□□□ -1.08
SUDS3-201ENST00000360286 TRMT2AQ8IZ69 625 aaKnown RBP8.31□□□□□ -1.08
SUDS3-201ENST00000360286 FLAD1Q8NFF5 587 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 ARXQ96QS3 562 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 SRP68Q9UHB9 627 aaKnown RBP8.31□□□□□ -1.08
SUDS3-201ENST00000360286 TBC1D2BQ9UPU7 963 aa8.31□□□□□ -1.08
SUDS3-201ENST00000360286 ATF5Q9Y2D1 282 aaPredicted RBP8.31□□□□□ -1.08
SUDS3-201ENST00000360286 CICQ96RK0 1608 aaPredicted RBP8.3□□□□□ -1.08
SUDS3-201ENST00000360286 RFC4P35249 363 aa8.3□□□□□ -1.08
SUDS3-201ENST00000360286 IL6STP40189 918 aaPredicted RBP8.3□□□□□ -1.08
SUDS3-201ENST00000360286 HDGFL1Q5TGJ6 251 aa8.3□□□□□ -1.08
SUDS3-201ENST00000360286 YTHDC1Q96MU7 727 aaKnown RBP8.3□□□□□ -1.08
SUDS3-201ENST00000360286 HOXB7P09629 217 aa8.29□□□□□ -1.08
SUDS3-201ENST00000360286 USPL1Q5W0Q7 1092 aa8.29□□□□□ -1.08
SUDS3-201ENST00000360286 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
SUDS3-201ENST00000360286 TTLL7Q6ZT98 887 aa8.29□□□□□ -1.08
SUDS3-201ENST00000360286 LRP10Q7Z4F1 713 aa8.29□□□□□ -1.08
SUDS3-201ENST00000360286 CHPF2Q9P2E5 772 aa8.29□□□□□ -1.08
SUDS3-201ENST00000360286 QSER1Q2KHR3 1735 aa8.29□□□□□ -1.08
SUDS3-201ENST00000360286 ZBED9Q6R2W3 1325 aa8.29□□□□□ -1.08
SUDS3-201ENST00000360286 LAMB4A4D0S4 1761 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 CASZ1Q86V15 1759 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 COL15A1P39059 1388 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 A0A087WZG4 1122 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 ZPR1O75312 459 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 GYS1P13807 737 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 AIMP1Q12904 312 aaKnown RBP8.28□□□□□ -1.08
SUDS3-201ENST00000360286 CCDC30Q5VVM6 783 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 COPS6Q7L5N1 327 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 DZIP3Q86Y13 1208 aaKnown RBP8.28□□□□□ -1.08
SUDS3-201ENST00000360286 SLC16A10Q8TF71 515 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 PHAXQ9H814 394 aaKnown RBP8.28□□□□□ -1.08
SUDS3-201ENST00000360286 BCL2L12Q9HB09 334 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 DDX21Q9NR30 783 aaKnown RBP eCLIP8.28□□□□□ -1.08
SUDS3-201ENST00000360286 NARFQ9UHQ1 456 aa8.28□□□□□ -1.08
SUDS3-201ENST00000360286 CAMTA2O94983 1202 aa8.27□□□□□ -1.09
SUDS3-201ENST00000360286 SLC4A2P04920 1241 aa8.27□□□□□ -1.09
SUDS3-201ENST00000360286 FKBP8Q14318 412 aa8.27□□□□□ -1.09
SUDS3-201ENST00000360286 HLFQ16534 295 aa8.27□□□□□ -1.09
SUDS3-201ENST00000360286 G2E3Q7L622 706 aa8.27□□□□□ -1.09
SUDS3-201ENST00000360286 NPM2Q86SE8 214 aaKnown RBP8.27□□□□□ -1.09
SUDS3-201ENST00000360286 XAGE3Q8WTP9 111 aa8.27□□□□□ -1.09
SUDS3-201ENST00000360286 MTFR1LQ9H019 292 aa8.27□□□□□ -1.09
SUDS3-201ENST00000360286 DBF4Q9UBU7 674 aaPredicted RBP8.27□□□□□ -1.09
SUDS3-201ENST00000360286 ERBB4Q15303 1308 aa8.27□□□□□ -1.09
SUDS3-201ENST00000360286 USP42Q9H9J4 1324 aaKnown RBP8.27□□□□□ -1.09
SUDS3-201ENST00000360286 PTGER2P43116 358 aa8.26□□□□□ -1.09
SUDS3-201ENST00000360286 BICDL1Q6ZP65 573 aa8.26□□□□□ -1.09
SUDS3-201ENST00000360286 ERICH6Q7L0X2 663 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms