RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 ISY1Q9ULR0 285 aaKnown RBP32.26■■■□□ 2.75
CUEDC1-201ENST00000360238 CHMLP26374 656 aa32.25■■■□□ 2.75
CUEDC1-201ENST00000360238 SSFA2P28290 1259 aa32.25■■■□□ 2.75
CUEDC1-201ENST00000360238 NUCB2P80303 420 aa32.25■■■□□ 2.75
CUEDC1-201ENST00000360238 CWC22Q9HCG8 908 aaKnown RBP32.25■■■□□ 2.75
CUEDC1-201ENST00000360238 LMOD2Q6P5Q4 547 aa32.24■■■□□ 2.75
CUEDC1-201ENST00000360238 PROSER2Q86WR7 435 aaPredicted RBP32.24■■■□□ 2.75
CUEDC1-201ENST00000360238 TRIM6-TRIM34B2RNG4 842 aa32.24■■■□□ 2.75
CUEDC1-201ENST00000360238 NBPF7P0C2Y1 421 aaPredicted RBP32.24■■■□□ 2.75
CUEDC1-201ENST00000360238 SURF6O75683 361 aaKnown RBP32.23■■■□□ 2.75
CUEDC1-201ENST00000360238 MCCP23508 829 aa32.23■■■□□ 2.75
CUEDC1-201ENST00000360238 SRGAP3O43295 1099 aa32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 CRYBG1Q9Y4K1 1723 aa32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 GOLGA6L22H0YM25 854 aa32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 EPB41L2O43491 1005 aaKnown RBP32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 GIGYF1O75420 1035 aaPredicted RBP32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 RILPL2Q969X0 211 aa32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 KIF1BPQ96EK5 621 aa32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 C19orf44Q9H6X5 657 aa32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 AXIN2Q9Y2T1 843 aa32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 SCN11AQ9UI33 1791 aa32.22■■■□□ 2.75
CUEDC1-201ENST00000360238 ANAPC15P60006 121 aa32.21■■■□□ 2.75
CUEDC1-201ENST00000360238 RHPN1Q8TCX5 695 aa32.21■■■□□ 2.75
CUEDC1-201ENST00000360238 ERBB3P21860 1342 aa32.21■■■□□ 2.75
CUEDC1-201ENST00000360238 HSP90AB4PQ58FF6 505 aa32.21■■■□□ 2.75
CUEDC1-201ENST00000360238 IL1RAPL2Q9NP60 686 aa32.21■■■□□ 2.75
CUEDC1-201ENST00000360238 ABCC6O95255 1503 aa32.21■■■□□ 2.75
CUEDC1-201ENST00000360238 CYP2E1P05181 493 aaPredicted RBP32.2■■■□□ 2.75
CUEDC1-201ENST00000360238 IL17RAQ96F46 866 aa32.2■■■□□ 2.75
CUEDC1-201ENST00000360238 ALDH1L1O75891 902 aa32.19■■■□□ 2.74
CUEDC1-201ENST00000360238 MTX1Q13505 466 aa32.19■■■□□ 2.74
CUEDC1-201ENST00000360238 RTN4Q9NQC3 1192 aaKnown RBP32.18■■■□□ 2.74
CUEDC1-201ENST00000360238 ANXA1P04083 346 aa32.18■■■□□ 2.74
CUEDC1-201ENST00000360238 XRCC6P12956 609 aaKnown RBP eCLIP32.18■■■□□ 2.74
CUEDC1-201ENST00000360238 MCM2P49736 904 aa32.18■■■□□ 2.74
CUEDC1-201ENST00000360238 BAG4O95429 457 aaKnown RBP32.17■■■□□ 2.74
CUEDC1-201ENST00000360238 MRE11P49959 708 aa32.16■■■□□ 2.74
CUEDC1-201ENST00000360238 UNC5CLQ8IV45 518 aa32.16■■■□□ 2.74
CUEDC1-201ENST00000360238 DCCP43146 1447 aa32.16■■■□□ 2.74
CUEDC1-201ENST00000360238 KSR2Q6VAB6 950 aa32.15■■■□□ 2.74
CUEDC1-201ENST00000360238 NUTM1Q86Y26 1132 aa32.15■■■□□ 2.74
CUEDC1-201ENST00000360238 PI4K2BQ8TCG2 481 aa32.15■■■□□ 2.74
CUEDC1-201ENST00000360238 ANO2Q9NQ90 1003 aa32.15■■■□□ 2.74
CUEDC1-201ENST00000360238 HDAC5Q9UQL6 1122 aa32.15■■■□□ 2.74
CUEDC1-201ENST00000360238 HYPKQ9NX55 129 aa32.15■■■□□ 2.74
CUEDC1-201ENST00000360238 PLEKHG5O94827 1062 aa32.14■■■□□ 2.74
CUEDC1-201ENST00000360238 MAP3K2Q9Y2U5 619 aa32.14■■■□□ 2.74
CUEDC1-201ENST00000360238 COL18A1P39060 1754 aa32.14■■■□□ 2.74
CUEDC1-201ENST00000360238 USP42Q9H9J4 1324 aaKnown RBP32.14■■■□□ 2.73
CUEDC1-201ENST00000360238 PLEKHG2Q9H7P9 1386 aa32.13■■■□□ 2.73
CUEDC1-201ENST00000360238 NEK4P51957 841 aa32.12■■■□□ 2.73
CUEDC1-201ENST00000360238 C5P01031 1676 aa32.12■■■□□ 2.73
CUEDC1-201ENST00000360238 PROSER3Q2NL68 480 aa32.11■■■□□ 2.73
CUEDC1-201ENST00000360238 FAM43AQ8N2R8 423 aa32.1■■■□□ 2.73
CUEDC1-201ENST00000360238 ZGPATQ8N5A5 531 aaKnown RBP32.09■■■□□ 2.73
CUEDC1-201ENST00000360238 PALD1Q9ULE6 856 aa32.09■■■□□ 2.73
CUEDC1-201ENST00000360238 TTC41PQ6P2S7 1318 aa32.09■■■□□ 2.73
CUEDC1-201ENST00000360238 C9orf78Q9NZ63 289 aaPredicted RBP32.09■■■□□ 2.73
CUEDC1-201ENST00000360238 KLHL40Q2TBA0 621 aa32.08■■■□□ 2.73
CUEDC1-201ENST00000360238 RAPGEF4Q8WZA2 1011 aa32.08■■■□□ 2.73
CUEDC1-201ENST00000360238 DDX21Q9NR30 783 aaKnown RBP eCLIP32.08■■■□□ 2.73
CUEDC1-201ENST00000360238 STRCP1A6NGW2 1772 aa32.08■■■□□ 2.73
CUEDC1-201ENST00000360238 KDM6AO15550 1401 aaPredicted RBP32.08■■■□□ 2.73
CUEDC1-201ENST00000360238 CNTROBQ8N137 903 aa32.08■■■□□ 2.73
CUEDC1-201ENST00000360238 GRPEL1Q9HAV7 217 aa32.08■■■□□ 2.73
CUEDC1-201ENST00000360238 DDX58O95786 925 aaKnown RBP32.07■■■□□ 2.72
CUEDC1-201ENST00000360238 TMX3Q96JJ7 454 aa32.07■■■□□ 2.72
CUEDC1-201ENST00000360238 ARXQ96QS3 562 aa32.07■■■□□ 2.72
CUEDC1-201ENST00000360238 ZC3H6P61129 1189 aaKnown RBP32.07■■■□□ 2.72
CUEDC1-201ENST00000360238 LINS1Q8NG48 757 aa32.07■■■□□ 2.72
CUEDC1-201ENST00000360238 PRAMEF22A3QJZ6 481 aa32.06■■■□□ 2.72
CUEDC1-201ENST00000360238 ATF3P18847 181 aa32.06■■■□□ 2.72
CUEDC1-201ENST00000360238 UTYO14607 1347 aa32.06■■■□□ 2.72
CUEDC1-201ENST00000360238 NPHP3Q7Z494 1330 aa32.06■■■□□ 2.72
CUEDC1-201ENST00000360238 ERC1Q8IUD2 1116 aa32.05■■■□□ 2.72
CUEDC1-201ENST00000360238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.05■■■□□ 2.72
CUEDC1-201ENST00000360238 MRC1P22897 1456 aa32.05■■■□□ 2.72
CUEDC1-201ENST00000360238 PKD1L3Q7Z443 1732 aa32.05■■■□□ 2.72
CUEDC1-201ENST00000360238 CUL4AQ13619 759 aa32.05■■■□□ 2.72
CUEDC1-201ENST00000360238 PKP1Q13835 747 aa32.05■■■□□ 2.72
CUEDC1-201ENST00000360238 HSPA4P34932 840 aa32.04■■■□□ 2.72
CUEDC1-201ENST00000360238 OS9Q13438 667 aaPredicted RBP32.04■■■□□ 2.72
CUEDC1-201ENST00000360238 SLC52A2Q9HAB3 445 aa32.04■■■□□ 2.72
CUEDC1-201ENST00000360238 MEGF6O75095 1541 aa32.03■■■□□ 2.72
CUEDC1-201ENST00000360238 TMEM94Q12767 1356 aa32.03■■■□□ 2.72
CUEDC1-201ENST00000360238 SGSM2O43147 1006 aa32.03■■■□□ 2.72
CUEDC1-201ENST00000360238 GLRX3O76003 335 aaKnown RBP32.03■■■□□ 2.72
CUEDC1-201ENST00000360238 ZNF790Q6PG37 636 aa32.03■■■□□ 2.72
CUEDC1-201ENST00000360238 RAD50Q92878 1312 aa32.03■■■□□ 2.72
CUEDC1-201ENST00000360238 TATP17735 454 aaPredicted RBP32.02■■■□□ 2.72
CUEDC1-201ENST00000360238 CLASRPQ8N2M8 674 aaKnown RBP32.02■■■□□ 2.72
CUEDC1-201ENST00000360238 IL25Q9H293 177 aa32.02■■■□□ 2.72
CUEDC1-201ENST00000360238 SPG7Q9UQ90 795 aa32.02■■■□□ 2.72
CUEDC1-201ENST00000360238 CWF19L2Q2TBE0 894 aaKnown RBP32.02■■■□□ 2.72
CUEDC1-201ENST00000360238 INTS4Q96HW7 963 aaKnown RBP32.02■■■□□ 2.72
CUEDC1-201ENST00000360238 PANK2Q9BZ23 570 aa32.02■■■□□ 2.72
CUEDC1-201ENST00000360238 NLRP2Q9NX02 1062 aa32.02■■■□□ 2.72
CUEDC1-201ENST00000360238 GRM8O00222 908 aa32.01■■■□□ 2.72
CUEDC1-201ENST00000360238 PDIA6Q15084 440 aa32.01■■■□□ 2.72
CUEDC1-201ENST00000360238 DDX49Q9Y6V7 483 aaKnown RBP32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms