RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 GIMAP6Q6P9H5 292 aa11.92□□□□□ -0.5
TRAPPC2-201ENST00000359680 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
TRAPPC2-201ENST00000359680 PDCL2Q8N4E4 241 aa11.92□□□□□ -0.5
TRAPPC2-201ENST00000359680 RIMBP3CA6NJZ7 1639 aa11.92□□□□□ -0.5
TRAPPC2-201ENST00000359680 RIMBP3BA6NNM3 1639 aa11.92□□□□□ -0.5
TRAPPC2-201ENST00000359680 RIMBP3Q9UFD9 1639 aa11.92□□□□□ -0.5
TRAPPC2-201ENST00000359680 ITSN1Q15811 1721 aa11.91□□□□□ -0.5
TRAPPC2-201ENST00000359680 ARHGEF10O15013 1369 aa11.91□□□□□ -0.5
TRAPPC2-201ENST00000359680 KIAA1524Q8TCG1 905 aa11.91□□□□□ -0.5
TRAPPC2-201ENST00000359680 GTPBP4Q9BZE4 634 aaKnown RBP11.91□□□□□ -0.5
TRAPPC2-201ENST00000359680 LIMCH1Q9UPQ0 1083 aa11.91□□□□□ -0.5
TRAPPC2-201ENST00000359680 C3P01024 1663 aa11.91□□□□□ -0.5
TRAPPC2-201ENST00000359680 RAD50Q92878 1312 aa11.91□□□□□ -0.5
TRAPPC2-201ENST00000359680 NCKAP5LQ9HCH0 1330 aa11.91□□□□□ -0.5
TRAPPC2-201ENST00000359680 AK2P54819 239 aa11.91□□□□□ -0.5
TRAPPC2-201ENST00000359680 IL25Q9H293 177 aa11.9□□□□□ -0.5
TRAPPC2-201ENST00000359680 IL1RAPL2Q9NP60 686 aa11.9□□□□□ -0.5
TRAPPC2-201ENST00000359680 SNX14Q9Y5W7 946 aa11.9□□□□□ -0.5
TRAPPC2-201ENST00000359680 LRRFIP2Q9Y608 721 aaKnown RBP11.9□□□□□ -0.5
TRAPPC2-201ENST00000359680 FLIIQ13045 1269 aa11.9□□□□□ -0.5
TRAPPC2-201ENST00000359680 SPC24Q8NBT2 197 aa11.9□□□□□ -0.5
TRAPPC2-201ENST00000359680 FUCA2Q9BTY2 467 aa11.9□□□□□ -0.5
TRAPPC2-201ENST00000359680 AKAP12Q02952 1782 aa11.9□□□□□ -0.5
TRAPPC2-201ENST00000359680 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
TRAPPC2-201ENST00000359680 CCDC192P0DO97 292 aa11.89□□□□□ -0.51
TRAPPC2-201ENST00000359680 ATP2B3Q16720 1220 aa11.89□□□□□ -0.51
TRAPPC2-201ENST00000359680 LARP6Q9BRS8 491 aaKnown RBP11.89□□□□□ -0.51
TRAPPC2-201ENST00000359680 PYCARDQ9ULZ3 195 aa11.89□□□□□ -0.51
TRAPPC2-201ENST00000359680 SGSM2O43147 1006 aa11.89□□□□□ -0.51
TRAPPC2-201ENST00000359680 MAP4K4O95819 1239 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC2-201ENST00000359680 NUTM1Q86Y26 1132 aa11.89□□□□□ -0.51
TRAPPC2-201ENST00000359680 TTC14Q96N46 770 aa11.89□□□□□ -0.51
TRAPPC2-201ENST00000359680 HSP90AB2PQ58FF8 381 aa11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 RUFY3Q7L099 469 aa11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 TXNDC2Q86VQ3 553 aa11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 KCNF1Q9H3M0 494 aa11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 SOS1Q07889 1333 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 UBTFL1P0CB47 393 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 DNM1Q05193 864 aaKnown RBP11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 CNTROBQ8N137 903 aa11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 SETD1AO15047 1707 aaKnown RBP11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 FOXO3O43524 673 aa11.88□□□□□ -0.51
TRAPPC2-201ENST00000359680 TTC21BQ7Z4L5 1316 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 RICTORQ6R327 1708 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 AP5Z1O43299 807 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 CASTP20810 708 aaKnown RBP11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 GJB2P29033 226 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 RAB11FIP3O75154 756 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 KIF20AO95235 890 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 CCDC83Q8IWF9 413 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
TRAPPC2-201ENST00000359680 XRN1Q8IZH2 1706 aaKnown RBP11.86□□□□□ -0.51
TRAPPC2-201ENST00000359680 VPS37CA5D8V6 355 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC2-201ENST00000359680 SURF6O75683 361 aaKnown RBP11.86□□□□□ -0.51
TRAPPC2-201ENST00000359680 ANKRD7Q92527 254 aa11.86□□□□□ -0.51
TRAPPC2-201ENST00000359680 SOX12O15370 315 aa11.86□□□□□ -0.51
TRAPPC2-201ENST00000359680 CWC27Q6UX04 472 aaKnown RBP11.86□□□□□ -0.51
TRAPPC2-201ENST00000359680 FAM200AQ8TCP9 573 aa11.86□□□□□ -0.51
TRAPPC2-201ENST00000359680 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
TRAPPC2-201ENST00000359680 A2ML1A8K2U0 1454 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 RGPD1P0DJD0 1748 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 PI4K2BQ8TCG2 481 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 SSH3Q8TE77 659 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 ZSCAN31Q96LW9 406 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 PODXL2Q9NZ53 605 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 MAP3K19Q56UN5 1328 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 CACNA1FO60840 1977 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 FAM208AQ9UK61 1670 aaKnown RBP11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 CTIFO43310 598 aaKnown RBP11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 LARGE1O95461 756 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 U2AF2P26368 475 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 MAP3K11Q16584 847 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 USP44Q9H0E7 712 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 SH2B1Q9NRF2 756 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 SPG7Q9UQ90 795 aa11.85□□□□□ -0.51
TRAPPC2-201ENST00000359680 CPA1P15085 419 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 PTGS1P23219 599 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 DRC7Q8IY82 874 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 RHPN1Q8TCX5 695 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 KIF1BPQ96EK5 621 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 NUP62CLQ9H1M0 184 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 PDRG1Q9NUG6 133 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 PEAK1Q9H792 1746 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 JAKMIP1Q96N16 626 aaKnown RBP11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 METP08581 1390 aa11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 RIMS1Q86UR5 1692 aaKnown RBP11.84□□□□□ -0.51
TRAPPC2-201ENST00000359680 KRT85P78386 507 aa11.83□□□□□ -0.52
TRAPPC2-201ENST00000359680 VPS53Q5VIR6 699 aa11.83□□□□□ -0.52
TRAPPC2-201ENST00000359680 FEZ1Q99689 392 aa11.83□□□□□ -0.52
TRAPPC2-201ENST00000359680 CYP46A1Q9Y6A2 500 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms