RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 PSME1Q06323 249 aa11.15□□□□□ -0.62
UBE2D3-204ENST00000349311 FAM69CQ0P6D2 419 aa11.15□□□□□ -0.62
UBE2D3-204ENST00000349311 LYSMD3Q7Z3D4 306 aa11.15□□□□□ -0.62
UBE2D3-204ENST00000349311 NOVA2Q9UNW9 492 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-204ENST00000349311 WDR97A6NE52 1622 aa11.15□□□□□ -0.62
UBE2D3-204ENST00000349311 KIF21BO75037 1637 aa11.15□□□□□ -0.62
UBE2D3-204ENST00000349311 TOPBP1Q92547 1522 aa11.14□□□□□ -0.63
UBE2D3-204ENST00000349311 POTEAQ6S8J7 498 aa11.14□□□□□ -0.63
UBE2D3-204ENST00000349311 ZSCAN10Q96SZ4 725 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-204ENST00000349311 SCHIP1Q9P0W5 487 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-204ENST00000349311 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
UBE2D3-204ENST00000349311 SENP3-EIF4A1A0A087X0R7 540 aa11.13□□□□□ -0.63
UBE2D3-204ENST00000349311 MAN1A2O60476 641 aa11.13□□□□□ -0.63
UBE2D3-204ENST00000349311 TLR1Q15399 786 aa11.13□□□□□ -0.63
UBE2D3-204ENST00000349311 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
UBE2D3-204ENST00000349311 SOGA1O94964 1423 aa11.12□□□□□ -0.63
UBE2D3-204ENST00000349311 SLC35F4A4IF30 521 aa11.12□□□□□ -0.63
UBE2D3-204ENST00000349311 RHBDD1Q8TEB9 315 aa11.12□□□□□ -0.63
UBE2D3-204ENST00000349311 URB2Q14146 1524 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 NBPF10Q6P3W6 841 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 PRICKLE2Q7Z3G6 844 aa11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 NBPF15Q8N660 670 aa11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 TSEN2Q8NCE0 465 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 FAM200AQ8TCP9 573 aa11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 ARID3AQ99856 593 aa11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 FGD5Q6ZNL6 1462 aa11.11□□□□□ -0.63
UBE2D3-204ENST00000349311 FAM9AQ8IZU1 332 aaPredicted RBP11.1□□□□□ -0.63
UBE2D3-204ENST00000349311 STK32AQ8WU08 396 aa11.1□□□□□ -0.63
UBE2D3-204ENST00000349311 C21orf2O43822 256 aa11.09□□□□□ -0.63
UBE2D3-204ENST00000349311 PTSQ03393 145 aa11.09□□□□□ -0.63
UBE2D3-204ENST00000349311 POU4F2Q12837 409 aa11.09□□□□□ -0.63
UBE2D3-204ENST00000349311 SWI5Q1ZZU3 235 aa11.09□□□□□ -0.63
UBE2D3-204ENST00000349311 C4orf17Q53FE4 359 aa11.09□□□□□ -0.63
UBE2D3-204ENST00000349311 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
UBE2D3-204ENST00000349311 TMEM88BA6NKF7 163 aa11.08□□□□□ -0.64
UBE2D3-204ENST00000349311 TMEM164Q5U3C3 297 aa11.08□□□□□ -0.64
UBE2D3-204ENST00000349311 TAS1R3Q7RTX0 852 aa11.08□□□□□ -0.64
UBE2D3-204ENST00000349311 ERICH3Q5RHP9 1530 aa11.08□□□□□ -0.64
UBE2D3-204ENST00000349311 ABCA10Q8WWZ4 1543 aa11.08□□□□□ -0.64
UBE2D3-204ENST00000349311 POLA1P09884 1462 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-204ENST00000349311 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
UBE2D3-204ENST00000349311 TEAD4Q15561 434 aa11.07□□□□□ -0.64
UBE2D3-204ENST00000349311 STAG2Q8N3U4 1231 aa11.07□□□□□ -0.64
UBE2D3-204ENST00000349311 RBM19Q9Y4C8 960 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-204ENST00000349311 WDR62O43379 1518 aa11.07□□□□□ -0.64
UBE2D3-204ENST00000349311 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
UBE2D3-204ENST00000349311 WEE1P30291 646 aa11.06□□□□□ -0.64
UBE2D3-204ENST00000349311 TMEM214Q6NUQ4 689 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-204ENST00000349311 NPAS3Q8IXF0 933 aa11.06□□□□□ -0.64
UBE2D3-204ENST00000349311 GAS2L2Q8NHY3 880 aa11.06□□□□□ -0.64
UBE2D3-204ENST00000349311 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-204ENST00000349311 TSPAN10Q9H1Z9 355 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-204ENST00000349311 DYRK1BQ9Y463 629 aa11.06□□□□□ -0.64
UBE2D3-204ENST00000349311 THOC2Q8NI27 1593 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-204ENST00000349311 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-204ENST00000349311 RHOQP17081 205 aa11.05□□□□□ -0.64
UBE2D3-204ENST00000349311 SLC9A9Q8IVB4 645 aa11.05□□□□□ -0.64
UBE2D3-204ENST00000349311 ZDHHC1Q8WTX9 485 aa11.05□□□□□ -0.64
UBE2D3-204ENST00000349311 SLAIN2Q9P270 581 aa11.05□□□□□ -0.64
UBE2D3-204ENST00000349311 GOLGA3Q08378 1498 aa11.05□□□□□ -0.64
UBE2D3-204ENST00000349311 ATAD2Q6PL18 1390 aa11.04□□□□□ -0.64
UBE2D3-204ENST00000349311 HIRAP54198 1017 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-204ENST00000349311 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
UBE2D3-204ENST00000349311 NIFKQ9BYG3 293 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-204ENST00000349311 NXF1Q9UBU9 619 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-204ENST00000349311 ABCA5Q8WWZ7 1642 aa11.03□□□□□ -0.64
UBE2D3-204ENST00000349311 IGFBP4P22692 258 aa11.03□□□□□ -0.64
UBE2D3-204ENST00000349311 OCLNQ16625 522 aa11.03□□□□□ -0.64
UBE2D3-204ENST00000349311 CCDC155Q8N6L0 562 aa11.03□□□□□ -0.64
UBE2D3-204ENST00000349311 C7orf43Q8WVR3 580 aa11.03□□□□□ -0.64
UBE2D3-204ENST00000349311 CLP1Q92989 425 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-204ENST00000349311 CUL7Q14999 1698 aa11.03□□□□□ -0.64
UBE2D3-204ENST00000349311 PRXQ9BXM0 1461 aa11.02□□□□□ -0.65
UBE2D3-204ENST00000349311 PPFIA3O75145 1194 aa11.02□□□□□ -0.65
UBE2D3-204ENST00000349311 EML1O00423 815 aa11.01□□□□□ -0.65
UBE2D3-204ENST00000349311 GTF2E1P29083 439 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-204ENST00000349311 NOS2P35228 1153 aa11.01□□□□□ -0.65
UBE2D3-204ENST00000349311 PSMA6P60900 246 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-204ENST00000349311 TBCELQ5QJ74 424 aa11.01□□□□□ -0.65
UBE2D3-204ENST00000349311 HINFPQ9BQA5 517 aa11.01□□□□□ -0.65
UBE2D3-204ENST00000349311 C2orf49Q9BVC5 232 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-204ENST00000349311 TIMMDC1Q9NPL8 285 aa11.01□□□□□ -0.65
UBE2D3-204ENST00000349311 CUX2O14529 1486 aa11□□□□□ -0.65
UBE2D3-204ENST00000349311 A0A1B0GTH6 734 aa11□□□□□ -0.65
UBE2D3-204ENST00000349311 ZDHHC3Q9NYG2 299 aa11□□□□□ -0.65
UBE2D3-204ENST00000349311 TNIKQ9UKE5 1360 aa11□□□□□ -0.65
UBE2D3-204ENST00000349311 H3BM21 787 aa10.99□□□□□ -0.65
UBE2D3-204ENST00000349311 TERTO14746 1132 aaKnown RBP10.99□□□□□ -0.65
UBE2D3-204ENST00000349311 ATP4AP20648 1035 aa10.99□□□□□ -0.65
UBE2D3-204ENST00000349311 PHKA2P46019 1235 aa10.99□□□□□ -0.65
UBE2D3-204ENST00000349311 LCE2AQ5TA79 106 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-204ENST00000349311 NANOS1Q8WY41 292 aaKnown RBP10.99□□□□□ -0.65
UBE2D3-204ENST00000349311 L3MBTL2Q969R5 705 aa10.99□□□□□ -0.65
UBE2D3-204ENST00000349311 CABP1Q9NZU7 370 aa10.99□□□□□ -0.65
UBE2D3-204ENST00000349311 USTQ9Y2C2 406 aa10.99□□□□□ -0.65
UBE2D3-204ENST00000349311 PBRM1Q86U86 1689 aa10.98□□□□□ -0.65
UBE2D3-204ENST00000349311 THBS1P07996 1170 aa10.98□□□□□ -0.65
UBE2D3-204ENST00000349311 ITGA6P23229 1130 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms