RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
TPM4-202ENST00000344824 ZNF496Q96IT1 587 aaPredicted RBP18.12■□□□□ 0.49
TPM4-202ENST00000344824 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
TPM4-202ENST00000344824 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
TPM4-202ENST00000344824 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
TPM4-202ENST00000344824 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
TPM4-202ENST00000344824 ARHGEF1Q92888 912 aaKnown RBP18.11■□□□□ 0.49
TPM4-202ENST00000344824 SYT17Q9BSW7 474 aa18.11■□□□□ 0.49
TPM4-202ENST00000344824 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
TPM4-202ENST00000344824 ZNF330Q9Y3S2 320 aaPredicted RBP18.11■□□□□ 0.49
TPM4-202ENST00000344824 CYP19A1P11511 503 aaPredicted RBP18.1■□□□□ 0.49
TPM4-202ENST00000344824 VSIG10Q8N0Z9 540 aa18.1■□□□□ 0.49
TPM4-202ENST00000344824 RRP7AQ9Y3A4 280 aaKnown RBP18.1■□□□□ 0.49
TPM4-202ENST00000344824 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
TPM4-202ENST00000344824 RIPK4P57078 832 aa18.09■□□□□ 0.49
TPM4-202ENST00000344824 HNRNPUQ00839 825 aaKnown RBP eCLIP18.09■□□□□ 0.49
TPM4-202ENST00000344824 COL15A1P39059 1388 aa18.09■□□□□ 0.49
TPM4-202ENST00000344824 INTS5Q6P9B9 1019 aaKnown RBP18.08■□□□□ 0.49
TPM4-202ENST00000344824 PELP1Q8IZL8 1130 aaKnown RBP18.08■□□□□ 0.49
TPM4-202ENST00000344824 MIS18AQ9NYP9 233 aa18.08■□□□□ 0.49
TPM4-202ENST00000344824 SRP68Q9UHB9 627 aaKnown RBP18.08■□□□□ 0.49
TPM4-202ENST00000344824 STARD3NLO95772 234 aa18.07■□□□□ 0.48
TPM4-202ENST00000344824 SCN7AQ01118 1682 aa18.07■□□□□ 0.48
TPM4-202ENST00000344824 MMP10P09238 476 aa18.06■□□□□ 0.48
TPM4-202ENST00000344824 TAF7Q15545 349 aaPredicted RBP18.06■□□□□ 0.48
TPM4-202ENST00000344824 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
TPM4-202ENST00000344824 SOS1Q07889 1333 aaPredicted RBP18.06■□□□□ 0.48
TPM4-202ENST00000344824 TMPOP42166 694 aaKnown RBP18.06■□□□□ 0.48
TPM4-202ENST00000344824 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
TPM4-202ENST00000344824 NLGN2Q8NFZ4 835 aa18.06■□□□□ 0.48
TPM4-202ENST00000344824 N4BP2Q86UW6 1770 aaPredicted RBP18.05■□□□□ 0.48
TPM4-202ENST00000344824 PRAMEF22A3QJZ6 481 aa18.05■□□□□ 0.48
TPM4-202ENST00000344824 ZPR1O75312 459 aa18.05■□□□□ 0.48
TPM4-202ENST00000344824 GYS1P13807 737 aa18.05■□□□□ 0.48
TPM4-202ENST00000344824 TEX13AQ9BXU3 409 aaPredicted RBP18.05■□□□□ 0.48
TPM4-202ENST00000344824 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
TPM4-202ENST00000344824 USP42Q9H9J4 1324 aaKnown RBP18.05■□□□□ 0.48
TPM4-202ENST00000344824 BCORQ6W2J9 1755 aa18.04■□□□□ 0.48
TPM4-202ENST00000344824 USPL1Q5W0Q7 1092 aa18.04■□□□□ 0.48
TPM4-202ENST00000344824 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
TPM4-202ENST00000344824 NLGN1Q8N2Q7 840 aa18.04■□□□□ 0.48
TPM4-202ENST00000344824 AFDNP55196 1824 aaKnown RBP18.03■□□□□ 0.48
TPM4-202ENST00000344824 KIF13BQ9NQT8 1826 aa18.03■□□□□ 0.48
TPM4-202ENST00000344824 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
TPM4-202ENST00000344824 CHD4Q14839 1912 aa18.02■□□□□ 0.48
TPM4-202ENST00000344824 A1BGP04217 495 aa18.02■□□□□ 0.48
TPM4-202ENST00000344824 TSPYL4Q9UJ04 414 aa18.02■□□□□ 0.48
TPM4-202ENST00000344824 PARP3Q9Y6F1 533 aa18.02■□□□□ 0.48
TPM4-202ENST00000344824 SNRPA1P09661 255 aaKnown RBP18.01■□□□□ 0.47
TPM4-202ENST00000344824 FKBP8Q14318 412 aa18.01■□□□□ 0.47
TPM4-202ENST00000344824 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
TPM4-202ENST00000344824 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
TPM4-202ENST00000344824 APAF1O14727 1248 aa18■□□□□ 0.47
TPM4-202ENST00000344824 GPR162Q16538 588 aa18■□□□□ 0.47
TPM4-202ENST00000344824 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
TPM4-202ENST00000344824 NARFQ9UHQ1 456 aa17.99■□□□□ 0.47
TPM4-202ENST00000344824 KIAA1551Q9HCM1 1747 aa17.99■□□□□ 0.47
TPM4-202ENST00000344824 A0A087WZG4 1122 aa17.98■□□□□ 0.47
TPM4-202ENST00000344824 GOLGB1Q14789 3259 aaKnown RBP17.98■□□□□ 0.47
TPM4-202ENST00000344824 IL6STP40189 918 aaPredicted RBP17.98■□□□□ 0.47
TPM4-202ENST00000344824 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
TPM4-202ENST00000344824 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
TPM4-202ENST00000344824 TBC1D2BQ9UPU7 963 aa17.98■□□□□ 0.47
TPM4-202ENST00000344824 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
TPM4-202ENST00000344824 C10orf71Q711Q0 1435 aa17.97■□□□□ 0.47
TPM4-202ENST00000344824 EIF4A1P60842 406 aaKnown RBP17.97■□□□□ 0.47
TPM4-202ENST00000344824 UTRNP46939 3433 aa17.96■□□□□ 0.47
TPM4-202ENST00000344824 DDR1Q08345 913 aa17.96■□□□□ 0.47
TPM4-202ENST00000344824 TRIM35Q9UPQ4 493 aa17.96■□□□□ 0.47
TPM4-202ENST00000344824 DZIP3Q86Y13 1208 aaKnown RBP17.95■□□□□ 0.46
TPM4-202ENST00000344824 BRCA1P38398 1863 aaKnown RBP17.94■□□□□ 0.46
TPM4-202ENST00000344824 NRXN2Q9P2S2 1712 aa17.94■□□□□ 0.46
TPM4-202ENST00000344824 NGEFQ8N5V2 710 aa17.94■□□□□ 0.46
TPM4-202ENST00000344824 BCL2L12Q9HB09 334 aa17.94■□□□□ 0.46
TPM4-202ENST00000344824 PXDNLA1KZ92 1463 aa17.94■□□□□ 0.46
TPM4-202ENST00000344824 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
TPM4-202ENST00000344824 NUP98P52948 1817 aa17.93■□□□□ 0.46
TPM4-202ENST00000344824 POLRMTO00411 1230 aaKnown RBP17.93■□□□□ 0.46
TPM4-202ENST00000344824 GIGYF1O75420 1035 aaPredicted RBP17.93■□□□□ 0.46
TPM4-202ENST00000344824 NFIXQ14938 502 aa17.93■□□□□ 0.46
TPM4-202ENST00000344824 CACNA1SQ13698 1873 aa17.92■□□□□ 0.46
TPM4-202ENST00000344824 MYL6BP14649 208 aa17.92■□□□□ 0.46
TPM4-202ENST00000344824 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
TPM4-202ENST00000344824 NPHP1O15259 732 aa17.91■□□□□ 0.46
TPM4-202ENST00000344824 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
TPM4-202ENST00000344824 YY1P25490 414 aa17.91■□□□□ 0.46
TPM4-202ENST00000344824 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
TPM4-202ENST00000344824 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
TPM4-202ENST00000344824 ANKRD31Q8N7Z5 1873 aa17.91■□□□□ 0.46
TPM4-202ENST00000344824 YBX3P16989 372 aaKnown RBP eCLIP17.9■□□□□ 0.46
TPM4-202ENST00000344824 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
TPM4-202ENST00000344824 NECTIN2Q92692 538 aa17.9■□□□□ 0.46
TPM4-202ENST00000344824 DLEC1Q9Y238 1755 aa17.9■□□□□ 0.46
TPM4-202ENST00000344824 CAMTA2O94983 1202 aa17.89■□□□□ 0.46
TPM4-202ENST00000344824 SERPINB2P05120 415 aa17.89■□□□□ 0.46
TPM4-202ENST00000344824 TM4SF1P30408 202 aa17.89■□□□□ 0.46
TPM4-202ENST00000344824 A0A0G2JLW4 131 aa17.89■□□□□ 0.45
TPM4-202ENST00000344824 KRT24Q2M2I5 525 aa17.89■□□□□ 0.45
TPM4-202ENST00000344824 BABAM1Q9NWV8 329 aa17.89■□□□□ 0.45
TPM4-202ENST00000344824 ARFGEF1Q9Y6D6 1849 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms