RNA–Protein interactions for RNA: ENST00000341028.8

CDK11B-202, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 2

Gene CDK11B, Length 881 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-202ENST00000341028 SYT17Q9BSW7 474 aa29.67■■■□□ 2.34
CDK11B-202ENST00000341028 RFC4P35249 363 aa29.64■■■□□ 2.34
CDK11B-202ENST00000341028 TEX13AQ9BXU3 409 aaPredicted RBP29.64■■■□□ 2.34
CDK11B-202ENST00000341028 MIS18AQ9NYP9 233 aa29.64■■■□□ 2.34
CDK11B-202ENST00000341028 ZBTB1Q9Y2K1 713 aa29.64■■■□□ 2.34
CDK11B-202ENST00000341028 C4AP0C0L4 1744 aa29.64■■■□□ 2.34
CDK11B-202ENST00000341028 STARD3NLO95772 234 aa29.63■■■□□ 2.33
CDK11B-202ENST00000341028 SOS1Q07889 1333 aaPredicted RBP29.63■■■□□ 2.33
CDK11B-202ENST00000341028 RRP7AQ9Y3A4 280 aaKnown RBP29.62■■■□□ 2.33
CDK11B-202ENST00000341028 GYS1P13807 737 aa29.6■■■□□ 2.33
CDK11B-202ENST00000341028 FAM9BQ8IZU0 186 aa29.6■■■□□ 2.33
CDK11B-202ENST00000341028 PRAMEF22A3QJZ6 481 aa29.58■■■□□ 2.33
CDK11B-202ENST00000341028 CANXP27824 592 aaKnown RBP29.58■■■□□ 2.33
CDK11B-202ENST00000341028 LMOD3Q0VAK6 560 aa29.58■■■□□ 2.33
CDK11B-202ENST00000341028 NEUROD2Q15784 382 aa29.58■■■□□ 2.33
CDK11B-202ENST00000341028 KDM3BQ7LBC6 1761 aa29.58■■■□□ 2.33
CDK11B-202ENST00000341028 NLGN1Q8N2Q7 840 aa29.58■■■□□ 2.33
CDK11B-202ENST00000341028 USP42Q9H9J4 1324 aaKnown RBP29.58■■■□□ 2.33
CDK11B-202ENST00000341028 SRP68Q9UHB9 627 aaKnown RBP29.58■■■□□ 2.33
CDK11B-202ENST00000341028 USP16Q9Y5T5 823 aa29.58■■■□□ 2.33
CDK11B-202ENST00000341028 SNRPA1P09661 255 aaKnown RBP29.57■■■□□ 2.32
CDK11B-202ENST00000341028 KLHL34Q8N239 644 aa29.57■■■□□ 2.32
CDK11B-202ENST00000341028 TRIM35Q9UPQ4 493 aa29.56■■■□□ 2.32
CDK11B-202ENST00000341028 COL15A1P39059 1388 aa29.55■■■□□ 2.32
CDK11B-202ENST00000341028 MMP10P09238 476 aa29.55■■■□□ 2.32
CDK11B-202ENST00000341028 EIF5P55010 431 aaKnown RBP29.55■■■□□ 2.32
CDK11B-202ENST00000341028 A1BGP04217 495 aa29.54■■■□□ 2.32
CDK11B-202ENST00000341028 EIF4A1P60842 406 aaKnown RBP29.53■■■□□ 2.32
CDK11B-202ENST00000341028 NARFQ9UHQ1 456 aa29.52■■■□□ 2.32
CDK11B-202ENST00000341028 APAF1O14727 1248 aa29.51■■■□□ 2.31
CDK11B-202ENST00000341028 ZPR1O75312 459 aa29.51■■■□□ 2.31
CDK11B-202ENST00000341028 FKBP8Q14318 412 aa29.51■■■□□ 2.31
CDK11B-202ENST00000341028 USPL1Q5W0Q7 1092 aa29.51■■■□□ 2.31
CDK11B-202ENST00000341028 NLGN2Q8NFZ4 835 aa29.51■■■□□ 2.31
CDK11B-202ENST00000341028 CD2APQ9Y5K6 639 aa29.51■■■□□ 2.31
CDK11B-202ENST00000341028 IL6STP40189 918 aaPredicted RBP29.5■■■□□ 2.31
CDK11B-202ENST00000341028 BABAM1Q9NWV8 329 aa29.49■■■□□ 2.31
CDK11B-202ENST00000341028 TSPYL4Q9UJ04 414 aa29.49■■■□□ 2.31
CDK11B-202ENST00000341028 GIGYF1O75420 1035 aaPredicted RBP29.48■■■□□ 2.31
CDK11B-202ENST00000341028 A0A087WZG4 1122 aa29.47■■■□□ 2.31
CDK11B-202ENST00000341028 BCL2L12Q9HB09 334 aa29.47■■■□□ 2.31
CDK11B-202ENST00000341028 PIP4K2AP48426 406 aaPredicted RBP29.46■■■□□ 2.31
CDK11B-202ENST00000341028 DCAF8L1A6NGE4 600 aa29.45■■■□□ 2.31
CDK11B-202ENST00000341028 TM4SF1P30408 202 aa29.45■■■□□ 2.31
CDK11B-202ENST00000341028 ZNF330Q9Y3S2 320 aaPredicted RBP29.45■■■□□ 2.31
CDK11B-202ENST00000341028 LAMB4A4D0S4 1761 aa29.44■■■□□ 2.3
CDK11B-202ENST00000341028 CHL1O00533 1208 aa29.44■■■□□ 2.3
CDK11B-202ENST00000341028 PARP3Q9Y6F1 533 aa29.44■■■□□ 2.3
CDK11B-202ENST00000341028 NBPF26B4DH59 902 aa29.43■■■□□ 2.3
CDK11B-202ENST00000341028 DDR1Q08345 913 aa29.43■■■□□ 2.3
CDK11B-202ENST00000341028 NBPF10Q6P3W6 841 aaKnown RBP29.43■■■□□ 2.3
CDK11B-202ENST00000341028 NBPF15Q8N660 670 aa29.43■■■□□ 2.3
CDK11B-202ENST00000341028 TBC1D2BQ9UPU7 963 aa29.43■■■□□ 2.3
CDK11B-202ENST00000341028 POLRMTO00411 1230 aaKnown RBP29.4■■■□□ 2.3
CDK11B-202ENST00000341028 NFIXQ14938 502 aa29.4■■■□□ 2.3
CDK11B-202ENST00000341028 KIF13BQ9NQT8 1826 aa29.39■■■□□ 2.3
CDK11B-202ENST00000341028 NPM2Q86SE8 214 aaKnown RBP29.39■■■□□ 2.3
CDK11B-202ENST00000341028 LAS1LQ9Y4W2 734 aaKnown RBP29.39■■■□□ 2.3
CDK11B-202ENST00000341028 C10orf71Q711Q0 1435 aa29.38■■■□□ 2.29
CDK11B-202ENST00000341028 SCN7AQ01118 1682 aa29.38■■■□□ 2.29
CDK11B-202ENST00000341028 CAMTA2O94983 1202 aa29.38■■■□□ 2.29
CDK11B-202ENST00000341028 NGEFQ8N5V2 710 aa29.38■■■□□ 2.29
CDK11B-202ENST00000341028 DZIP3Q86Y13 1208 aaKnown RBP29.37■■■□□ 2.29
CDK11B-202ENST00000341028 CFAP44Q96MT7 982 aa29.37■■■□□ 2.29
CDK11B-202ENST00000341028 NCBP3Q53F19 620 aaKnown RBP29.36■■■□□ 2.29
CDK11B-202ENST00000341028 GPR162Q16538 588 aa29.35■■■□□ 2.29
CDK11B-202ENST00000341028 ZNF853P0CG23 659 aa29.34■■■□□ 2.29
CDK11B-202ENST00000341028 TBC1D9BQ66K14 1250 aa29.34■■■□□ 2.29
CDK11B-202ENST00000341028 BCORQ6W2J9 1755 aa29.34■■■□□ 2.29
CDK11B-202ENST00000341028 SENP3-EIF4A1A0A087X0R7 540 aa29.33■■■□□ 2.29
CDK11B-202ENST00000341028 HNRNPUQ00839 825 aaKnown RBP eCLIP29.33■■■□□ 2.29
CDK11B-202ENST00000341028 KRT24Q2M2I5 525 aa29.33■■■□□ 2.29
CDK11B-202ENST00000341028 KIAA1551Q9HCM1 1747 aa29.33■■■□□ 2.29
CDK11B-202ENST00000341028 TGFB2P61812 414 aa29.32■■■□□ 2.28
CDK11B-202ENST00000341028 BICDL1Q6ZP65 573 aa29.32■■■□□ 2.28
CDK11B-202ENST00000341028 PELP1Q8IZL8 1130 aaKnown RBP29.32■■■□□ 2.28
CDK11B-202ENST00000341028 AFDNP55196 1824 aaKnown RBP29.31■■■□□ 2.28
CDK11B-202ENST00000341028 PXDNLA1KZ92 1463 aa29.31■■■□□ 2.28
CDK11B-202ENST00000341028 SERPINB2P05120 415 aa29.31■■■□□ 2.28
CDK11B-202ENST00000341028 YBX3P16989 372 aaKnown RBP eCLIP29.31■■■□□ 2.28
CDK11B-202ENST00000341028 CALD1Q05682 793 aaKnown RBP29.31■■■□□ 2.28
CDK11B-202ENST00000341028 MBIPQ9NS73 344 aa29.31■■■□□ 2.28
CDK11B-202ENST00000341028 IFT57Q9NWB7 429 aa29.31■■■□□ 2.28
CDK11B-202ENST00000341028 NRXN2Q9P2S2 1712 aa29.31■■■□□ 2.28
CDK11B-202ENST00000341028 ERBB4Q15303 1308 aa29.3■■■□□ 2.28
CDK11B-202ENST00000341028 EIF2S2P20042 333 aaKnown RBP29.3■■■□□ 2.28
CDK11B-202ENST00000341028 CCDC27Q2M243 656 aa29.3■■■□□ 2.28
CDK11B-202ENST00000341028 MYL6BP14649 208 aa29.28■■■□□ 2.28
CDK11B-202ENST00000341028 GNAI1P63096 354 aa29.28■■■□□ 2.28
CDK11B-202ENST00000341028 PDIA6Q15084 440 aa29.28■■■□□ 2.28
CDK11B-202ENST00000341028 CLEC4GQ6UXB4 293 aa29.28■■■□□ 2.28
CDK11B-202ENST00000341028 YTHDC1Q96MU7 727 aaKnown RBP29.28■■■□□ 2.28
CDK11B-202ENST00000341028 N4BP2Q86UW6 1770 aaPredicted RBP29.28■■■□□ 2.28
CDK11B-202ENST00000341028 A0A0G2JLW4 131 aa29.27■■■□□ 2.28
CDK11B-202ENST00000341028 ZBED9Q6R2W3 1325 aa29.26■■■□□ 2.27
CDK11B-202ENST00000341028 RGL2O15211 777 aa29.26■■■□□ 2.27
CDK11B-202ENST00000341028 DPEP1P16444 411 aa29.26■■■□□ 2.27
CDK11B-202ENST00000341028 LRP10Q7Z4F1 713 aa29.26■■■□□ 2.27
CDK11B-202ENST00000341028 WWC1Q8IX03 1113 aa29.26■■■□□ 2.27
CDK11B-202ENST00000341028 WWC3Q9ULE0 1092 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms