RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TRAPPC8Q9Y2L5 1435 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 F13A1P00488 732 aa15.53■□□□□ 0.08
COL2A1-201ENST00000337299 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
COL2A1-201ENST00000337299 CCDC69A6NI79 296 aa15.52■□□□□ 0.08
COL2A1-201ENST00000337299 CCT4P50991 539 aaKnown RBP15.52■□□□□ 0.08
COL2A1-201ENST00000337299 TEFQ10587 303 aa15.52■□□□□ 0.08
COL2A1-201ENST00000337299 AIMP1Q12904 312 aaKnown RBP15.52■□□□□ 0.08
COL2A1-201ENST00000337299 ANO10Q9NW15 660 aa15.52■□□□□ 0.08
COL2A1-201ENST00000337299 CCDC171Q6TFL3 1326 aa15.52■□□□□ 0.08
COL2A1-201ENST00000337299 MNAT1P51948 309 aa15.52■□□□□ 0.08
COL2A1-201ENST00000337299 TRIM29Q14134 588 aa15.52■□□□□ 0.08
COL2A1-201ENST00000337299 JAKMIP3Q5VZ66 844 aa15.52■□□□□ 0.08
COL2A1-201ENST00000337299 DISP1Q96F81 1524 aa15.52■□□□□ 0.08
COL2A1-201ENST00000337299 PDE1AP54750 535 aa15.52■□□□□ 0.07
COL2A1-201ENST00000337299 ESCO1Q5FWF5 840 aa15.52■□□□□ 0.07
COL2A1-201ENST00000337299 TAF7LQ5H9L4 462 aa15.52■□□□□ 0.07
COL2A1-201ENST00000337299 ATAD2Q6PL18 1390 aa15.52■□□□□ 0.07
COL2A1-201ENST00000337299 KIAA0754O94854 1291 aa15.51■□□□□ 0.07
COL2A1-201ENST00000337299 GNG11P61952 73 aa15.51■□□□□ 0.07
COL2A1-201ENST00000337299 HSP90AA4PQ58FG1 418 aa15.51■□□□□ 0.07
COL2A1-201ENST00000337299 CPLX2Q6PUV4 134 aaKnown RBP15.51■□□□□ 0.07
COL2A1-201ENST00000337299 ESYT1Q9BSJ8 1104 aa15.51■□□□□ 0.07
COL2A1-201ENST00000337299 SRRTQ9BXP5 876 aaKnown RBP15.51■□□□□ 0.07
COL2A1-201ENST00000337299 CAPN2P17655 700 aa15.51■□□□□ 0.07
COL2A1-201ENST00000337299 SYT1P21579 422 aa15.51■□□□□ 0.07
COL2A1-201ENST00000337299 NEMFO60524 1076 aa15.5■□□□□ 0.07
COL2A1-201ENST00000337299 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
COL2A1-201ENST00000337299 ZNF215Q9UL58 517 aaPredicted RBP15.5■□□□□ 0.07
COL2A1-201ENST00000337299 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
COL2A1-201ENST00000337299 NEK11Q8NG66 645 aa15.5■□□□□ 0.07
COL2A1-201ENST00000337299 CASQ1P31415 396 aa15.5■□□□□ 0.07
COL2A1-201ENST00000337299 KIF4BQ2VIQ3 1234 aa15.5■□□□□ 0.07
COL2A1-201ENST00000337299 ARFGAP3Q9NP61 516 aa15.5■□□□□ 0.07
COL2A1-201ENST00000337299 LIG1P18858 919 aa15.49■□□□□ 0.07
COL2A1-201ENST00000337299 AKAP17AQ02040 695 aaKnown RBP15.49■□□□□ 0.07
COL2A1-201ENST00000337299 MBIPQ9NS73 344 aa15.49■□□□□ 0.07
COL2A1-201ENST00000337299 NAP1L1P55209 391 aaKnown RBP15.49■□□□□ 0.07
COL2A1-201ENST00000337299 THEMISQ8N1K5 641 aaPredicted RBP15.49■□□□□ 0.07
COL2A1-201ENST00000337299 FSIP1Q8NA03 581 aa15.49■□□□□ 0.07
COL2A1-201ENST00000337299 USP16Q9Y5T5 823 aa15.49■□□□□ 0.07
COL2A1-201ENST00000337299 PLCH2O75038 1416 aa15.49■□□□□ 0.07
COL2A1-201ENST00000337299 ANKRD1Q15327 319 aa15.48■□□□□ 0.07
COL2A1-201ENST00000337299 GIMAP7Q8NHV1 300 aa15.48■□□□□ 0.07
COL2A1-201ENST00000337299 CPLX3Q8WVH0 158 aa15.48■□□□□ 0.07
COL2A1-201ENST00000337299 HOOK1Q9UJC3 728 aaKnown RBP15.48■□□□□ 0.07
COL2A1-201ENST00000337299 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
COL2A1-201ENST00000337299 NAA30Q147X3 362 aaPredicted RBP15.48■□□□□ 0.07
COL2A1-201ENST00000337299 ANKRD20A12PQ8NF67 263 aa15.48■□□□□ 0.07
COL2A1-201ENST00000337299 ZBTB7BO15156 539 aaPredicted RBP15.48■□□□□ 0.07
COL2A1-201ENST00000337299 TOP1P11387 765 aaKnown RBP15.48■□□□□ 0.07
COL2A1-201ENST00000337299 USP8P40818 1118 aa15.48■□□□□ 0.07
COL2A1-201ENST00000337299 CCDC30Q5VVM6 783 aa15.48■□□□□ 0.07
COL2A1-201ENST00000337299 AOPEPQ8N6M6 819 aa15.48■□□□□ 0.07
COL2A1-201ENST00000337299 PLCD4Q9BRC7 762 aa15.48■□□□□ 0.07
COL2A1-201ENST00000337299 ASXL2Q76L83 1435 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 AACSQ86V21 672 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 PPFIBP1Q86W92 1011 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 DRC1Q96MC2 740 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 PRAG1Q86YV5 1406 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 RPGRIP1LQ68CZ1 1315 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 AK2P54819 239 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 C8orf58Q8NAV2 365 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 ASXL1Q8IXJ9 1541 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 ABCC11Q96J66 1382 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 GSDMDP57764 484 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 STX1AQ16623 288 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 DNAAF4Q8WXU2 420 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 NUDT16Q96DE0 195 aaKnown RBP15.47■□□□□ 0.07
COL2A1-201ENST00000337299 SH2B1Q9NRF2 756 aaPredicted RBP15.47■□□□□ 0.07
COL2A1-201ENST00000337299 CCDC61Q9Y6R9 512 aa15.47■□□□□ 0.07
COL2A1-201ENST00000337299 CDR1P51861 262 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 NFXL1Q6ZNB6 911 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 ERO1AQ96HE7 468 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 DCTPP1Q9H773 170 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 VPS18Q9P253 973 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 ZSCAN12O43309 604 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 ZSCAN20P17040 1043 aaPredicted RBP15.46■□□□□ 0.07
COL2A1-201ENST00000337299 HDGFL1Q5TGJ6 251 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 ANKRD44Q8N8A2 993 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 KRT24Q2M2I5 525 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 C1orf141Q5JVX7 400 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 CCAR1Q8IX12 1150 aaKnown RBP15.46■□□□□ 0.07
COL2A1-201ENST00000337299 PRDM4Q9UKN5 801 aa15.46■□□□□ 0.07
COL2A1-201ENST00000337299 GSPT1P15170 499 aaKnown RBP15.46■□□□□ 0.06
COL2A1-201ENST00000337299 ERCC6LQ2NKX8 1250 aa15.46■□□□□ 0.06
COL2A1-201ENST00000337299 RALYLQ86SE5 291 aaKnown RBP15.46■□□□□ 0.06
COL2A1-201ENST00000337299 CRACR2AQ9BSW2 395 aa15.46■□□□□ 0.06
COL2A1-201ENST00000337299 NOS1P29475 1434 aa15.45■□□□□ 0.06
COL2A1-201ENST00000337299 BRD1O95696 1058 aa15.45■□□□□ 0.06
COL2A1-201ENST00000337299 WASHC4Q2M389 1173 aa15.45■□□□□ 0.06
COL2A1-201ENST00000337299 PROSER2Q86WR7 435 aaPredicted RBP15.45■□□□□ 0.06
COL2A1-201ENST00000337299 MICALL1Q8N3F8 863 aa15.45■□□□□ 0.06
COL2A1-201ENST00000337299 NLRP2Q9NX02 1062 aa15.45■□□□□ 0.06
COL2A1-201ENST00000337299 EMILIN1Q9Y6C2 1016 aa15.45■□□□□ 0.06
COL2A1-201ENST00000337299 MRPL50Q8N5N7 158 aaKnown RBP15.45■□□□□ 0.06
COL2A1-201ENST00000337299 CCDC12Q8WUD4 166 aaPredicted RBP15.45■□□□□ 0.06
COL2A1-201ENST00000337299 ZNF521Q96K83 1311 aa15.45■□□□□ 0.06
COL2A1-201ENST00000337299 KIAA0556O60303 1618 aa15.45■□□□□ 0.06
COL2A1-201ENST00000337299 TTC31Q49AM3 519 aaPredicted RBP15.45■□□□□ 0.06
COL2A1-201ENST00000337299 NRBP1Q9UHY1 535 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms