RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 AMIGO3Q86WK7 504 aa11□□□□□ -0.65
PACRG-201ENST00000337019 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
PACRG-201ENST00000337019 PLEKHF1Q96S99 279 aa11□□□□□ -0.65
PACRG-201ENST00000337019 COL15A1P39059 1388 aa10.99□□□□□ -0.65
PACRG-201ENST00000337019 CYP19A1P11511 503 aaPredicted RBP10.99□□□□□ -0.65
PACRG-201ENST00000337019 TAF7Q15545 349 aaPredicted RBP10.99□□□□□ -0.65
PACRG-201ENST00000337019 ZNF496Q96IT1 587 aaPredicted RBP10.99□□□□□ -0.65
PACRG-201ENST00000337019 ZNF330Q9Y3S2 320 aaPredicted RBP10.99□□□□□ -0.65
PACRG-201ENST00000337019 VIRMAQ69YN4 1812 aaKnown RBP10.99□□□□□ -0.65
PACRG-201ENST00000337019 A0A087WZG4 1122 aa10.98□□□□□ -0.65
PACRG-201ENST00000337019 CANXP27824 592 aaKnown RBP10.98□□□□□ -0.65
PACRG-201ENST00000337019 RIPK4P57078 832 aa10.98□□□□□ -0.65
PACRG-201ENST00000337019 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
PACRG-201ENST00000337019 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
PACRG-201ENST00000337019 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
PACRG-201ENST00000337019 PARP3Q9Y6F1 533 aa10.98□□□□□ -0.65
PACRG-201ENST00000337019 SOS1Q07889 1333 aaPredicted RBP10.98□□□□□ -0.65
PACRG-201ENST00000337019 USP42Q9H9J4 1324 aaKnown RBP10.98□□□□□ -0.65
PACRG-201ENST00000337019 MMP10P09238 476 aa10.98□□□□□ -0.65
PACRG-201ENST00000337019 SNRPA1P09661 255 aaKnown RBP10.98□□□□□ -0.65
PACRG-201ENST00000337019 GPR162Q16538 588 aa10.98□□□□□ -0.65
PACRG-201ENST00000337019 INTS5Q6P9B9 1019 aaKnown RBP10.98□□□□□ -0.65
PACRG-201ENST00000337019 ZBTB1Q9Y2K1 713 aa10.98□□□□□ -0.65
PACRG-201ENST00000337019 CD2APQ9Y5K6 639 aa10.98□□□□□ -0.65
PACRG-201ENST00000337019 UBR2Q8IWV8 1755 aa10.97□□□□□ -0.65
PACRG-201ENST00000337019 SIPA1L3O60292 1781 aaPredicted RBP10.96□□□□□ -0.65
PACRG-201ENST00000337019 GYS1P13807 737 aa10.96□□□□□ -0.65
PACRG-201ENST00000337019 TMPOP42166 694 aaKnown RBP10.96□□□□□ -0.65
PACRG-201ENST00000337019 NEUROD2Q15784 382 aa10.96□□□□□ -0.65
PACRG-201ENST00000337019 COL24A1Q17RW2 1714 aa10.96□□□□□ -0.65
PACRG-201ENST00000337019 KCNQ3O43525 872 aa10.95□□□□□ -0.66
PACRG-201ENST00000337019 SRP68Q9UHB9 627 aaKnown RBP10.95□□□□□ -0.66
PACRG-201ENST00000337019 TSPYL4Q9UJ04 414 aa10.95□□□□□ -0.66
PACRG-201ENST00000337019 ADAMTS8Q9UP79 889 aa10.95□□□□□ -0.66
PACRG-201ENST00000337019 RRP7AQ9Y3A4 280 aaKnown RBP10.95□□□□□ -0.66
PACRG-201ENST00000337019 FANCIQ9NVI1 1328 aa10.95□□□□□ -0.66
PACRG-201ENST00000337019 IL6STP40189 918 aaPredicted RBP10.95□□□□□ -0.66
PACRG-201ENST00000337019 USPL1Q5W0Q7 1092 aa10.95□□□□□ -0.66
PACRG-201ENST00000337019 NLGN2Q8NFZ4 835 aa10.95□□□□□ -0.66
PACRG-201ENST00000337019 THUMPD2Q9BTF0 503 aaKnown RBP10.95□□□□□ -0.66
PACRG-201ENST00000337019 NARFQ9UHQ1 456 aa10.95□□□□□ -0.66
PACRG-201ENST00000337019 C4AP0C0L4 1744 aa10.94□□□□□ -0.66
PACRG-201ENST00000337019 NPHP1O15259 732 aa10.94□□□□□ -0.66
PACRG-201ENST00000337019 MRS2Q9HD23 443 aa10.94□□□□□ -0.66
PACRG-201ENST00000337019 CALD1Q05682 793 aaKnown RBP10.93□□□□□ -0.66
PACRG-201ENST00000337019 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
PACRG-201ENST00000337019 MIS18AQ9NYP9 233 aa10.93□□□□□ -0.66
PACRG-201ENST00000337019 ZBED9Q6R2W3 1325 aa10.93□□□□□ -0.66
PACRG-201ENST00000337019 GRIN3BO60391 1043 aa10.92□□□□□ -0.66
PACRG-201ENST00000337019 A1BGP04217 495 aa10.92□□□□□ -0.66
PACRG-201ENST00000337019 YY1P25490 414 aa10.92□□□□□ -0.66
PACRG-201ENST00000337019 EIF5P55010 431 aaKnown RBP10.92□□□□□ -0.66
PACRG-201ENST00000337019 BABAM1Q9NWV8 329 aa10.92□□□□□ -0.66
PACRG-201ENST00000337019 ZNF652Q9Y2D9 606 aa10.92□□□□□ -0.66
PACRG-201ENST00000337019 LAS1LQ9Y4W2 734 aaKnown RBP10.92□□□□□ -0.66
PACRG-201ENST00000337019 MYH14Q7Z406 1995 aaKnown RBP10.92□□□□□ -0.66
PACRG-201ENST00000337019 DZIP3Q86Y13 1208 aaKnown RBP10.91□□□□□ -0.66
PACRG-201ENST00000337019 USP16Q9Y5T5 823 aa10.91□□□□□ -0.66
PACRG-201ENST00000337019 DLG5Q8TDM6 1919 aa10.91□□□□□ -0.66
PACRG-201ENST00000337019 C10orf71Q711Q0 1435 aa10.91□□□□□ -0.66
PACRG-201ENST00000337019 EIF4A1P60842 406 aaKnown RBP10.91□□□□□ -0.66
PACRG-201ENST00000337019 PRAMEF22A3QJZ6 481 aa10.9□□□□□ -0.66
PACRG-201ENST00000337019 APAF1O14727 1248 aa10.9□□□□□ -0.66
PACRG-201ENST00000337019 TGFB2P61812 414 aa10.9□□□□□ -0.66
PACRG-201ENST00000337019 KIF6Q6ZMV9 814 aa10.9□□□□□ -0.66
PACRG-201ENST00000337019 BICDL1Q6ZP65 573 aa10.9□□□□□ -0.66
PACRG-201ENST00000337019 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.66
PACRG-201ENST00000337019 KDM3BQ7LBC6 1761 aa10.89□□□□□ -0.67
PACRG-201ENST00000337019 CARMIL3Q8ND23 1372 aa10.89□□□□□ -0.67
PACRG-201ENST00000337019 POLRMTO00411 1230 aaKnown RBP10.89□□□□□ -0.67
PACRG-201ENST00000337019 GIGYF1O75420 1035 aaPredicted RBP10.89□□□□□ -0.67
PACRG-201ENST00000337019 PIP4K2AP48426 406 aaPredicted RBP10.89□□□□□ -0.67
PACRG-201ENST00000337019 DDR1Q08345 913 aa10.89□□□□□ -0.67
PACRG-201ENST00000337019 NFIXQ14938 502 aa10.89□□□□□ -0.67
PACRG-201ENST00000337019 LAMB4A4D0S4 1761 aa10.89□□□□□ -0.67
PACRG-201ENST00000337019 ERBB4Q15303 1308 aa10.89□□□□□ -0.67
PACRG-201ENST00000337019 SETDB2Q96T68 719 aa10.88□□□□□ -0.67
PACRG-201ENST00000337019 SCN7AQ01118 1682 aa10.88□□□□□ -0.67
PACRG-201ENST00000337019 PXDNLA1KZ92 1463 aa10.88□□□□□ -0.67
PACRG-201ENST00000337019 CAMTA2O94983 1202 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 SERPINB2P05120 415 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 TM4SF1P30408 202 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 GNAI1P63096 354 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 ST5P78524 1137 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 NGEFQ8N5V2 710 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 WWC3Q9ULE0 1092 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 TRIM35Q9UPQ4 493 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 MYL6BP14649 208 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 YBX3P16989 372 aaKnown RBP eCLIP10.87□□□□□ -0.67
PACRG-201ENST00000337019 EIF2S2P20042 333 aaKnown RBP10.87□□□□□ -0.67
PACRG-201ENST00000337019 TBC1D9BQ66K14 1250 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 CLEC4GQ6UXB4 293 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 CNBD1Q8NA66 436 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 BCL2L12Q9HB09 334 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 BCS1LQ9Y276 419 aa10.87□□□□□ -0.67
PACRG-201ENST00000337019 A0A0G2JLW4 131 aa10.86□□□□□ -0.67
PACRG-201ENST00000337019 RGL2O15211 777 aa10.86□□□□□ -0.67
PACRG-201ENST00000337019 DPEP1P16444 411 aa10.86□□□□□ -0.67
PACRG-201ENST00000337019 CFAP44Q96MT7 982 aa10.86□□□□□ -0.67
PACRG-201ENST00000337019 IFT57Q9NWB7 429 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms