RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RREB1Q92766 1687 aa22.61■■□□□ 1.21
CHGA-202ENST00000334654 TEX13AQ9BXU3 409 aaPredicted RBP22.61■■□□□ 1.21
CHGA-202ENST00000334654 CT47B1P0C2W7 299 aaPredicted RBP22.58■■□□□ 1.2
CHGA-202ENST00000334654 EIF2S2P20042 333 aaKnown RBP22.58■■□□□ 1.2
CHGA-202ENST00000334654 C4BP0C0L5 1744 aa22.57■■□□□ 1.2
CHGA-202ENST00000334654 NUP188Q5SRE5 1749 aa22.57■■□□□ 1.2
CHGA-202ENST00000334654 A1BGP04217 495 aa22.57■■□□□ 1.2
CHGA-202ENST00000334654 PDIA6Q15084 440 aa22.57■■□□□ 1.2
CHGA-202ENST00000334654 HDGFL1Q5TGJ6 251 aa22.57■■□□□ 1.2
CHGA-202ENST00000334654 INTS5Q6P9B9 1019 aaKnown RBP22.57■■□□□ 1.2
CHGA-202ENST00000334654 NECTIN2Q92692 538 aa22.57■■□□□ 1.2
CHGA-202ENST00000334654 STARD3NLO95772 234 aa22.56■■□□□ 1.2
CHGA-202ENST00000334654 CRKLP46109 303 aaKnown RBP22.56■■□□□ 1.2
CHGA-202ENST00000334654 NBPF26B4DH59 902 aa22.55■■□□□ 1.2
CHGA-202ENST00000334654 NBPF14Q5TI25 921 aa22.55■■□□□ 1.2
CHGA-202ENST00000334654 NBPF10Q6P3W6 841 aaKnown RBP22.55■■□□□ 1.2
CHGA-202ENST00000334654 NBPF15Q8N660 670 aa22.55■■□□□ 1.2
CHGA-202ENST00000334654 CNTNAP4Q9C0A0 1308 aa22.55■■□□□ 1.2
CHGA-202ENST00000334654 RC3H1Q5TC82 1133 aaKnown RBP22.54■■□□□ 1.2
CHGA-202ENST00000334654 LRP10Q7Z4F1 713 aa22.54■■□□□ 1.2
CHGA-202ENST00000334654 CACNA1FO60840 1977 aa22.54■■□□□ 1.2
CHGA-202ENST00000334654 TCERG1O14776 1098 aaKnown RBP22.54■■□□□ 1.2
CHGA-202ENST00000334654 PIP4K2AP48426 406 aaPredicted RBP22.54■■□□□ 1.2
CHGA-202ENST00000334654 CCDC87Q9NVE4 849 aa22.54■■□□□ 1.2
CHGA-202ENST00000334654 ZBTB1Q9Y2K1 713 aa22.54■■□□□ 1.2
CHGA-202ENST00000334654 RARSP54136 660 aaKnown RBP22.53■■□□□ 1.2
CHGA-202ENST00000334654 PROSER3Q2NL68 480 aa22.53■■□□□ 1.2
CHGA-202ENST00000334654 CCDC30Q5VVM6 783 aa22.53■■□□□ 1.2
CHGA-202ENST00000334654 AKT1S1Q96B36 256 aa22.53■■□□□ 1.2
CHGA-202ENST00000334654 ZNF428Q96B54 188 aa22.53■■□□□ 1.2
CHGA-202ENST00000334654 CHPF2Q9P2E5 772 aa22.53■■□□□ 1.2
CHGA-202ENST00000334654 ERBB4Q15303 1308 aa22.52■■□□□ 1.2
CHGA-202ENST00000334654 ANXA1P04083 346 aa22.52■■□□□ 1.2
CHGA-202ENST00000334654 AMIGO3Q86WK7 504 aa22.52■■□□□ 1.2
CHGA-202ENST00000334654 SSH1Q8WYL5 1049 aa22.52■■□□□ 1.2
CHGA-202ENST00000334654 UBR3Q6ZT12 1888 aa22.51■■□□□ 1.19
CHGA-202ENST00000334654 ZNF827Q17R98 1081 aa22.51■■□□□ 1.19
CHGA-202ENST00000334654 DDX21Q9NR30 783 aaKnown RBP eCLIP22.51■■□□□ 1.19
CHGA-202ENST00000334654 ALDH1L2Q3SY69 923 aa22.5■■□□□ 1.19
CHGA-202ENST00000334654 ANO8Q9HCE9 1232 aaPredicted RBP22.5■■□□□ 1.19
CHGA-202ENST00000334654 DBF4Q9UBU7 674 aaPredicted RBP22.5■■□□□ 1.19
CHGA-202ENST00000334654 RPS6KA4O75676 772 aa22.49■■□□□ 1.19
CHGA-202ENST00000334654 CANXP27824 592 aaKnown RBP22.49■■□□□ 1.19
CHGA-202ENST00000334654 CHMP4AQ9BY43 222 aa22.49■■□□□ 1.19
CHGA-202ENST00000334654 TUBGCP6Q96RT7 1819 aa22.49■■□□□ 1.19
CHGA-202ENST00000334654 EIF5P55010 431 aaKnown RBP22.48■■□□□ 1.19
CHGA-202ENST00000334654 SMIM5Q71RC9 77 aa22.48■■□□□ 1.19
CHGA-202ENST00000334654 MRPL50Q8N5N7 158 aaKnown RBP22.48■■□□□ 1.19
CHGA-202ENST00000334654 SLC4A2P04920 1241 aa22.47■■□□□ 1.19
CHGA-202ENST00000334654 MYL6BP14649 208 aa22.47■■□□□ 1.19
CHGA-202ENST00000334654 HMGB2P26583 209 aaKnown RBP22.47■■□□□ 1.19
CHGA-202ENST00000334654 IL6STP40189 918 aaPredicted RBP22.47■■□□□ 1.19
CHGA-202ENST00000334654 BCL2L13Q9BXK5 485 aa22.47■■□□□ 1.19
CHGA-202ENST00000334654 BCAR3O75815 825 aa22.47■■□□□ 1.19
CHGA-202ENST00000334654 G2E3Q7L622 706 aa22.47■■□□□ 1.19
CHGA-202ENST00000334654 PHAXQ9H814 394 aaKnown RBP22.47■■□□□ 1.19
CHGA-202ENST00000334654 GNPATO15228 680 aa22.46■■□□□ 1.19
CHGA-202ENST00000334654 BRPF1P55201 1214 aaPredicted RBP22.46■■□□□ 1.19
CHGA-202ENST00000334654 AK7Q96M32 723 aa22.46■■□□□ 1.19
CHGA-202ENST00000334654 STK31Q9BXU1 1019 aa22.46■■□□□ 1.19
CHGA-202ENST00000334654 HYPKQ9NX55 129 aa22.46■■□□□ 1.19
CHGA-202ENST00000334654 RCAN3Q9UKA8 241 aa22.46■■□□□ 1.19
CHGA-202ENST00000334654 SLC15A2Q16348 729 aa22.44■■□□□ 1.18
CHGA-202ENST00000334654 SMC4Q9NTJ3 1288 aa22.43■■□□□ 1.18
CHGA-202ENST00000334654 RTCBQ9Y3I0 505 aaKnown RBP22.43■■□□□ 1.18
CHGA-202ENST00000334654 COPS6Q7L5N1 327 aa22.42■■□□□ 1.18
CHGA-202ENST00000334654 XAGE3Q8WTP9 111 aa22.42■■□□□ 1.18
CHGA-202ENST00000334654 QSER1Q2KHR3 1735 aa22.42■■□□□ 1.18
CHGA-202ENST00000334654 COL15A1P39059 1388 aa22.42■■□□□ 1.18
CHGA-202ENST00000334654 TTLL7Q6ZT98 887 aa22.41■■□□□ 1.18
CHGA-202ENST00000334654 C4AP0C0L4 1744 aa22.41■■□□□ 1.18
CHGA-202ENST00000334654 SOCS7O14512 581 aa22.41■■□□□ 1.18
CHGA-202ENST00000334654 SSFA2P28290 1259 aa22.41■■□□□ 1.18
CHGA-202ENST00000334654 FLIIQ13045 1269 aa22.41■■□□□ 1.18
CHGA-202ENST00000334654 ARHGEF1Q92888 912 aaKnown RBP22.41■■□□□ 1.18
CHGA-202ENST00000334654 STK32BQ9NY57 414 aa22.41■■□□□ 1.18
CHGA-202ENST00000334654 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
CHGA-202ENST00000334654 PNPLA7Q6ZV29 1317 aa22.4■■□□□ 1.18
CHGA-202ENST00000334654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.4■■□□□ 1.18
CHGA-202ENST00000334654 ZNF330Q9Y3S2 320 aaPredicted RBP22.4■■□□□ 1.18
CHGA-202ENST00000334654 ADRA2BP18089 450 aa22.39■■□□□ 1.17
CHGA-202ENST00000334654 AIMP1Q12904 312 aaKnown RBP22.39■■□□□ 1.17
CHGA-202ENST00000334654 PHF14O94880 888 aa22.38■■□□□ 1.17
CHGA-202ENST00000334654 TRAPPC3LQ5T215 181 aa22.38■■□□□ 1.17
CHGA-202ENST00000334654 COL23A1Q86Y22 540 aaPredicted RBP22.38■■□□□ 1.17
CHGA-202ENST00000334654 NOB1Q9ULX3 412 aaKnown RBP22.38■■□□□ 1.17
CHGA-202ENST00000334654 TBC1D2BQ9UPU7 963 aa22.38■■□□□ 1.17
CHGA-202ENST00000334654 DZIP3Q86Y13 1208 aaKnown RBP22.37■■□□□ 1.17
CHGA-202ENST00000334654 BCORQ6W2J9 1755 aa22.36■■□□□ 1.17
CHGA-202ENST00000334654 ADCY9O60503 1353 aa22.36■■□□□ 1.17
CHGA-202ENST00000334654 A0A087WZG4 1122 aa22.35■■□□□ 1.17
CHGA-202ENST00000334654 CAMTA2O94983 1202 aa22.35■■□□□ 1.17
CHGA-202ENST00000334654 NARFQ9UHQ1 456 aa22.35■■□□□ 1.17
CHGA-202ENST00000334654 NUP98P52948 1817 aa22.35■■□□□ 1.17
CHGA-202ENST00000334654 MAP3K15Q6ZN16 1313 aa22.35■■□□□ 1.17
CHGA-202ENST00000334654 KIF16BQ96L93 1317 aa22.35■■□□□ 1.17
CHGA-202ENST00000334654 ANKRD13DQ6ZTN6 518 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 FLAD1Q8NFF5 587 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 BCL2L12Q9HB09 334 aa22.34■■□□□ 1.17
CHGA-202ENST00000334654 SRP68Q9UHB9 627 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms