RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SLFN5Q08AF3 891 aa20.84■□□□□ 0.93
LRRC28-202ENST00000331450 RC3H1Q5TC82 1133 aaKnown RBP20.84■□□□□ 0.93
LRRC28-202ENST00000331450 MYH16Q9H6N6 1097 aa20.84■□□□□ 0.93
LRRC28-202ENST00000331450 HOXB7P09629 217 aa20.83■□□□□ 0.93
LRRC28-202ENST00000331450 CRKLP46109 303 aaKnown RBP20.83■□□□□ 0.93
LRRC28-202ENST00000331450 TRMT2AQ8IZ69 625 aaKnown RBP20.83■□□□□ 0.93
LRRC28-202ENST00000331450 CDCA7LQ96GN5 454 aa20.83■□□□□ 0.93
LRRC28-202ENST00000331450 USP16Q9Y5T5 823 aa20.83■□□□□ 0.93
LRRC28-202ENST00000331450 INTS5Q6P9B9 1019 aaKnown RBP20.82■□□□□ 0.92
LRRC28-202ENST00000331450 BCORQ6W2J9 1755 aa20.82■□□□□ 0.92
LRRC28-202ENST00000331450 SLC15A2Q16348 729 aa20.81■□□□□ 0.92
LRRC28-202ENST00000331450 C8orf58Q8NAV2 365 aa20.81■□□□□ 0.92
LRRC28-202ENST00000331450 CCDC87Q9NVE4 849 aa20.81■□□□□ 0.92
LRRC28-202ENST00000331450 SOS1Q07889 1333 aaPredicted RBP20.8■□□□□ 0.92
LRRC28-202ENST00000331450 SCN7AQ01118 1682 aa20.8■□□□□ 0.92
LRRC28-202ENST00000331450 STARD3NLO95772 234 aa20.8■□□□□ 0.92
LRRC28-202ENST00000331450 NBPF14Q5TI25 921 aa20.8■□□□□ 0.92
LRRC28-202ENST00000331450 DUSP27Q5VZP5 1158 aa20.8■□□□□ 0.92
LRRC28-202ENST00000331450 STK32BQ9NY57 414 aa20.8■□□□□ 0.92
LRRC28-202ENST00000331450 COL24A1Q17RW2 1714 aa20.8■□□□□ 0.92
LRRC28-202ENST00000331450 CACNA1FO60840 1977 aa20.79■□□□□ 0.92
LRRC28-202ENST00000331450 AMIGO3Q86WK7 504 aa20.79■□□□□ 0.92
LRRC28-202ENST00000331450 TSPYL6Q8N831 410 aa20.79■□□□□ 0.92
LRRC28-202ENST00000331450 AK7Q96M32 723 aa20.79■□□□□ 0.92
LRRC28-202ENST00000331450 ZBTB1Q9Y2K1 713 aa20.79■□□□□ 0.92
LRRC28-202ENST00000331450 EXOSC9Q06265 439 aaKnown RBP20.78■□□□□ 0.92
LRRC28-202ENST00000331450 ERBB4Q15303 1308 aa20.78■□□□□ 0.92
LRRC28-202ENST00000331450 GNPATO15228 680 aa20.77■□□□□ 0.92
LRRC28-202ENST00000331450 RPS6KA4O75676 772 aa20.77■□□□□ 0.92
LRRC28-202ENST00000331450 PNPLA7Q6ZV29 1317 aa20.77■□□□□ 0.91
LRRC28-202ENST00000331450 A1BGP04217 495 aa20.76■□□□□ 0.91
LRRC28-202ENST00000331450 COL15A1P39059 1388 aa20.75■□□□□ 0.91
LRRC28-202ENST00000331450 NBPF26B4DH59 902 aa20.75■□□□□ 0.91
LRRC28-202ENST00000331450 SSFA2P28290 1259 aa20.75■□□□□ 0.91
LRRC28-202ENST00000331450 TWISTNBQ3B726 338 aaPredicted RBP20.75■□□□□ 0.91
LRRC28-202ENST00000331450 NBPF10Q6P3W6 841 aaKnown RBP20.75■□□□□ 0.91
LRRC28-202ENST00000331450 NBPF15Q8N660 670 aa20.75■□□□□ 0.91
LRRC28-202ENST00000331450 TFCP2L1Q9NZI6 479 aa20.75■□□□□ 0.91
LRRC28-202ENST00000331450 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
LRRC28-202ENST00000331450 PDIA6Q15084 440 aa20.74■□□□□ 0.91
LRRC28-202ENST00000331450 HDGFL1Q5TGJ6 251 aa20.74■□□□□ 0.91
LRRC28-202ENST00000331450 RTCBQ9Y3I0 505 aaKnown RBP20.74■□□□□ 0.91
LRRC28-202ENST00000331450 ADRA2BP18089 450 aa20.73■□□□□ 0.91
LRRC28-202ENST00000331450 EIF2S2P20042 333 aaKnown RBP20.73■□□□□ 0.91
LRRC28-202ENST00000331450 CANXP27824 592 aaKnown RBP20.73■□□□□ 0.91
LRRC28-202ENST00000331450 IL6STP40189 918 aaPredicted RBP20.73■□□□□ 0.91
LRRC28-202ENST00000331450 EIF5P55010 431 aaKnown RBP20.73■□□□□ 0.91
LRRC28-202ENST00000331450 R3HDM1Q15032 1099 aaKnown RBP20.73■□□□□ 0.91
LRRC28-202ENST00000331450 SMIM5Q71RC9 77 aa20.73■□□□□ 0.91
LRRC28-202ENST00000331450 LRP10Q7Z4F1 713 aa20.73■□□□□ 0.91
LRRC28-202ENST00000331450 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.72■□□□□ 0.91
LRRC28-202ENST00000331450 VAMP4O75379 141 aa20.72■□□□□ 0.91
LRRC28-202ENST00000331450 PIP4K2AP48426 406 aaPredicted RBP20.72■□□□□ 0.91
LRRC28-202ENST00000331450 COL23A1Q86Y22 540 aaPredicted RBP20.71■□□□□ 0.91
LRRC28-202ENST00000331450 FLAD1Q8NFF5 587 aa20.71■□□□□ 0.91
LRRC28-202ENST00000331450 NECTIN2Q92692 538 aa20.71■□□□□ 0.91
LRRC28-202ENST00000331450 ANKRD36CQ5JPF3 1778 aa20.71■□□□□ 0.91
LRRC28-202ENST00000331450 ARFGEF2Q9Y6D5 1785 aa20.7■□□□□ 0.9
LRRC28-202ENST00000331450 NUP98P52948 1817 aa20.7■□□□□ 0.9
LRRC28-202ENST00000331450 PSDA5PKW4 1024 aaPredicted RBP20.7■□□□□ 0.9
LRRC28-202ENST00000331450 PHF14O94880 888 aa20.7■□□□□ 0.9
LRRC28-202ENST00000331450 PROSER3Q2NL68 480 aa20.7■□□□□ 0.9
LRRC28-202ENST00000331450 YTHDC1Q96MU7 727 aaKnown RBP20.7■□□□□ 0.9
LRRC28-202ENST00000331450 PDGFDQ9GZP0 370 aaPredicted RBP20.7■□□□□ 0.9
LRRC28-202ENST00000331450 DDX21Q9NR30 783 aaKnown RBP eCLIP20.7■□□□□ 0.9
LRRC28-202ENST00000331450 CHPF2Q9P2E5 772 aa20.7■□□□□ 0.9
LRRC28-202ENST00000331450 ARHGEF1Q92888 912 aaKnown RBP20.69■□□□□ 0.9
LRRC28-202ENST00000331450 CCDC30Q5VVM6 783 aa20.68■□□□□ 0.9
LRRC28-202ENST00000331450 CHMP4AQ9BY43 222 aa20.68■□□□□ 0.9
LRRC28-202ENST00000331450 DBF4Q9UBU7 674 aaPredicted RBP20.68■□□□□ 0.9
LRRC28-202ENST00000331450 ANXA1P04083 346 aa20.67■□□□□ 0.9
LRRC28-202ENST00000331450 CT47B1P0C2W7 299 aaPredicted RBP20.67■□□□□ 0.9
LRRC28-202ENST00000331450 MYL6BP14649 208 aa20.67■□□□□ 0.9
LRRC28-202ENST00000331450 TRAPPC3LQ5T215 181 aa20.67■□□□□ 0.9
LRRC28-202ENST00000331450 USP42Q9H9J4 1324 aaKnown RBP20.67■□□□□ 0.9
LRRC28-202ENST00000331450 A0A087WZG4 1122 aa20.65■□□□□ 0.9
LRRC28-202ENST00000331450 ZNF428Q96B54 188 aa20.65■□□□□ 0.9
LRRC28-202ENST00000331450 SLC16A10Q8TF71 515 aa20.64■□□□□ 0.89
LRRC28-202ENST00000331450 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
LRRC28-202ENST00000331450 NARFQ9UHQ1 456 aa20.64■□□□□ 0.89
LRRC28-202ENST00000331450 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
LRRC28-202ENST00000331450 RFC4P35249 363 aa20.63■□□□□ 0.89
LRRC28-202ENST00000331450 DZIP3Q86Y13 1208 aaKnown RBP20.63■□□□□ 0.89
LRRC28-202ENST00000331450 STK31Q9BXU1 1019 aa20.63■□□□□ 0.89
LRRC28-202ENST00000331450 SRP68Q9UHB9 627 aaKnown RBP20.63■□□□□ 0.89
LRRC28-202ENST00000331450 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
LRRC28-202ENST00000331450 CAMTA2O94983 1202 aa20.62■□□□□ 0.89
LRRC28-202ENST00000331450 TTLL7Q6ZT98 887 aa20.62■□□□□ 0.89
LRRC28-202ENST00000331450 TBC1D2BQ9UPU7 963 aa20.62■□□□□ 0.89
LRRC28-202ENST00000331450 LRP5O75197 1615 aa20.62■□□□□ 0.89
LRRC28-202ENST00000331450 N4BP2Q86UW6 1770 aaPredicted RBP20.62■□□□□ 0.89
LRRC28-202ENST00000331450 NRXN2Q9P2S2 1712 aa20.61■□□□□ 0.89
LRRC28-202ENST00000331450 GYS1P13807 737 aa20.61■□□□□ 0.89
LRRC28-202ENST00000331450 XAGE3Q8WTP9 111 aa20.61■□□□□ 0.89
LRRC28-202ENST00000331450 PHAXQ9H814 394 aaKnown RBP20.61■□□□□ 0.89
LRRC28-202ENST00000331450 BCL2L12Q9HB09 334 aa20.61■□□□□ 0.89
LRRC28-202ENST00000331450 AFDNP55196 1824 aaKnown RBP20.61■□□□□ 0.89
LRRC28-202ENST00000331450 MAP3K15Q6ZN16 1313 aa20.6■□□□□ 0.89
LRRC28-202ENST00000331450 RGL2O15211 777 aa20.6■□□□□ 0.89
LRRC28-202ENST00000331450 MSH5O43196 834 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms