RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ERBB3P21860 1342 aa17.86■□□□□ 0.45
TPM3-206ENST00000330188 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
TPM3-206ENST00000330188 IL1RAPL2Q9NP60 686 aa17.86■□□□□ 0.45
TPM3-206ENST00000330188 SURF6O75683 361 aaKnown RBP17.84■□□□□ 0.45
TPM3-206ENST00000330188 CHMLP26374 656 aa17.84■□□□□ 0.45
TPM3-206ENST00000330188 L1TD1Q5T7N2 865 aaKnown RBP17.84■□□□□ 0.45
TPM3-206ENST00000330188 STRCP1A6NGW2 1772 aa17.84■□□□□ 0.45
TPM3-206ENST00000330188 TRIM6-TRIM34B2RNG4 842 aa17.84■□□□□ 0.45
TPM3-206ENST00000330188 SRGAP3O43295 1099 aa17.84■□□□□ 0.45
TPM3-206ENST00000330188 ST18O60284 1047 aa17.84■□□□□ 0.45
TPM3-206ENST00000330188 RILPL2Q969X0 211 aa17.84■□□□□ 0.45
TPM3-206ENST00000330188 GZF1Q9H116 711 aaPredicted RBP17.84■□□□□ 0.45
TPM3-206ENST00000330188 CRYBG1Q9Y4K1 1723 aa17.83■□□□□ 0.45
TPM3-206ENST00000330188 SSFA2P28290 1259 aa17.83■□□□□ 0.45
TPM3-206ENST00000330188 ZC3H6P61129 1189 aaKnown RBP17.83■□□□□ 0.45
TPM3-206ENST00000330188 RHPN1Q8TCX5 695 aa17.83■□□□□ 0.45
TPM3-206ENST00000330188 AK9Q5TCS8 1911 aa17.83■□□□□ 0.45
TPM3-206ENST00000330188 SCN11AQ9UI33 1791 aa17.83■□□□□ 0.44
TPM3-206ENST00000330188 FSD2A1L4K1 749 aa17.83■□□□□ 0.44
TPM3-206ENST00000330188 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
TPM3-206ENST00000330188 PROSER3Q2NL68 480 aa17.83■□□□□ 0.44
TPM3-206ENST00000330188 UNC5CLQ8IV45 518 aa17.83■□□□□ 0.44
TPM3-206ENST00000330188 COL18A1P39060 1754 aa17.82■□□□□ 0.44
TPM3-206ENST00000330188 NUTM1Q86Y26 1132 aa17.82■□□□□ 0.44
TPM3-206ENST00000330188 CLEC17AQ6ZS10 378 aa17.81■□□□□ 0.44
TPM3-206ENST00000330188 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
TPM3-206ENST00000330188 MAP3K2Q9Y2U5 619 aa17.81■□□□□ 0.44
TPM3-206ENST00000330188 ALDH1L1O75891 902 aa17.8■□□□□ 0.44
TPM3-206ENST00000330188 KSR2Q6VAB6 950 aa17.8■□□□□ 0.44
TPM3-206ENST00000330188 C5P01031 1676 aa17.8■□□□□ 0.44
TPM3-206ENST00000330188 TMEM94Q12767 1356 aa17.8■□□□□ 0.44
TPM3-206ENST00000330188 DCCP43146 1447 aa17.8■□□□□ 0.44
TPM3-206ENST00000330188 GOLGA6L3A6NEY3 463 aa17.8■□□□□ 0.44
TPM3-206ENST00000330188 PTMSP20962 102 aa17.8■□□□□ 0.44
TPM3-206ENST00000330188 MTX1Q13505 466 aa17.8■□□□□ 0.44
TPM3-206ENST00000330188 PI4K2BQ8TCG2 481 aa17.8■□□□□ 0.44
TPM3-206ENST00000330188 ATF3P18847 181 aa17.79■□□□□ 0.44
TPM3-206ENST00000330188 DDX17Q92841 729 aaKnown RBP17.79■□□□□ 0.44
TPM3-206ENST00000330188 KDM6AO15550 1401 aaPredicted RBP17.79■□□□□ 0.44
TPM3-206ENST00000330188 CYP2E1P05181 493 aaPredicted RBP17.78■□□□□ 0.44
TPM3-206ENST00000330188 HSP90AB4PQ58FF6 505 aa17.78■□□□□ 0.44
TPM3-206ENST00000330188 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
TPM3-206ENST00000330188 ABCC6O95255 1503 aa17.78■□□□□ 0.44
TPM3-206ENST00000330188 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
TPM3-206ENST00000330188 CWC22Q9HCG8 908 aaKnown RBP17.78■□□□□ 0.44
TPM3-206ENST00000330188 ANO2Q9NQ90 1003 aa17.78■□□□□ 0.44
TPM3-206ENST00000330188 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
TPM3-206ENST00000330188 MCCP23508 829 aa17.77■□□□□ 0.44
TPM3-206ENST00000330188 NUCB2P80303 420 aa17.77■□□□□ 0.44
TPM3-206ENST00000330188 SKOR2Q2VWA4 1001 aaPredicted RBP17.77■□□□□ 0.44
TPM3-206ENST00000330188 DDX21Q9NR30 783 aaKnown RBP eCLIP17.77■□□□□ 0.44
TPM3-206ENST00000330188 NLRP2Q9NX02 1062 aa17.77■□□□□ 0.44
TPM3-206ENST00000330188 PALD1Q9ULE6 856 aa17.77■□□□□ 0.44
TPM3-206ENST00000330188 NPHP3Q7Z494 1330 aa17.77■□□□□ 0.44
TPM3-206ENST00000330188 MEGF6O75095 1541 aa17.77■□□□□ 0.43
TPM3-206ENST00000330188 BAG4O95429 457 aaKnown RBP17.77■□□□□ 0.43
TPM3-206ENST00000330188 ANAPC15P60006 121 aa17.77■□□□□ 0.43
TPM3-206ENST00000330188 IL17RAQ96F46 866 aa17.77■□□□□ 0.43
TPM3-206ENST00000330188 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.439e-13■□□□□ 8.6
TPM3-206ENST00000330188 PDIA6Q15084 440 aa17.76■□□□□ 0.43
TPM3-206ENST00000330188 CWF19L2Q2TBE0 894 aaKnown RBP17.76■□□□□ 0.43
TPM3-206ENST00000330188 ZGPATQ8N5A5 531 aaKnown RBP17.76■□□□□ 0.43
TPM3-206ENST00000330188 IL25Q9H293 177 aa17.76■□□□□ 0.43
TPM3-206ENST00000330188 C9orf78Q9NZ63 289 aaPredicted RBP17.76■□□□□ 0.43
TPM3-206ENST00000330188 PHKG2P15735 406 aa17.75■□□□□ 0.43
TPM3-206ENST00000330188 TATP17735 454 aaPredicted RBP17.75■□□□□ 0.43
TPM3-206ENST00000330188 NEK4P51957 841 aa17.75■□□□□ 0.43
TPM3-206ENST00000330188 ZNF790Q6PG37 636 aa17.75■□□□□ 0.43
TPM3-206ENST00000330188 SLC52A2Q9HAB3 445 aa17.75■□□□□ 0.43
TPM3-206ENST00000330188 USP42Q9H9J4 1324 aaKnown RBP17.75■□□□□ 0.43
TPM3-206ENST00000330188 EPB41L2O43491 1005 aaKnown RBP17.75■□□□□ 0.43
TPM3-206ENST00000330188 MAP4K4O95819 1239 aaPredicted RBP17.75■□□□□ 0.43
TPM3-206ENST00000330188 TNS3Q68CZ2 1445 aa17.74■□□□□ 0.43
TPM3-206ENST00000330188 SLC39A6Q13433 755 aa17.74■□□□□ 0.43
TPM3-206ENST00000330188 PKP1Q13835 747 aa17.74■□□□□ 0.43
TPM3-206ENST00000330188 LINS1Q8NG48 757 aa17.74■□□□□ 0.43
TPM3-206ENST00000330188 ARXQ96QS3 562 aa17.74■□□□□ 0.43
TPM3-206ENST00000330188 UTYO14607 1347 aa17.74■□□□□ 0.43
TPM3-206ENST00000330188 DDX58O95786 925 aaKnown RBP17.74■□□□□ 0.43
TPM3-206ENST00000330188 MCM2P49736 904 aa17.74■□□□□ 0.43
TPM3-206ENST00000330188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.74■□□□□ 0.434e-7■■■□□ 17.2
TPM3-206ENST00000330188 SPG7Q9UQ90 795 aa17.74■□□□□ 0.43
TPM3-206ENST00000330188 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
TPM3-206ENST00000330188 PKD1L3Q7Z443 1732 aa17.73■□□□□ 0.43
TPM3-206ENST00000330188 GOLGA6L22H0YM25 854 aa17.73■□□□□ 0.43
TPM3-206ENST00000330188 OS9Q13438 667 aaPredicted RBP17.73■□□□□ 0.43
TPM3-206ENST00000330188 MRC1P22897 1456 aa17.73■□□□□ 0.43
TPM3-206ENST00000330188 TTC41PQ6P2S7 1318 aa17.72■□□□□ 0.43
TPM3-206ENST00000330188 CNTROBQ8N137 903 aa17.72■□□□□ 0.43
TPM3-206ENST00000330188 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
TPM3-206ENST00000330188 TMX3Q96JJ7 454 aa17.72■□□□□ 0.43
TPM3-206ENST00000330188 PLEKHG2Q9H7P9 1386 aa17.72■□□□□ 0.43
TPM3-206ENST00000330188 GRM8O00222 908 aa17.72■□□□□ 0.43
TPM3-206ENST00000330188 AIMP1Q12904 312 aaKnown RBP17.72■□□□□ 0.43
TPM3-206ENST00000330188 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
TPM3-206ENST00000330188 SUCLG2Q96I99 432 aa17.72■□□□□ 0.43
TPM3-206ENST00000330188 SGSM2O43147 1006 aa17.71■□□□□ 0.43
TPM3-206ENST00000330188 IFNL2Q8IZJ0 200 aa17.71■□□□□ 0.43
TPM3-206ENST00000330188 KAZALD1Q96I82 304 aa17.71■□□□□ 0.43
TPM3-206ENST00000330188 ISY1Q9ULR0 285 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms