RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 UBR2Q8IWV8 1755 aa24.77■■□□□ 1.56
MRPL54-201ENST00000330133 TUBGCP6Q96RT7 1819 aa24.77■■□□□ 1.56
MRPL54-201ENST00000330133 CICQ96RK0 1608 aaPredicted RBP24.77■■□□□ 1.56
MRPL54-201ENST00000330133 EIF4A1P60842 406 aaKnown RBP24.77■■□□□ 1.56
MRPL54-201ENST00000330133 CALD1Q05682 793 aaKnown RBP24.77■■□□□ 1.56
MRPL54-201ENST00000330133 COL5A3P25940 1745 aaPredicted RBP24.77■■□□□ 1.56
MRPL54-201ENST00000330133 CCER2I3L3R5 266 aa24.76■■□□□ 1.55
MRPL54-201ENST00000330133 CANXP27824 592 aaKnown RBP24.76■■□□□ 1.55
MRPL54-201ENST00000330133 MSL1Q68DK7 614 aa24.76■■□□□ 1.55
MRPL54-201ENST00000330133 ZBTB1Q9Y2K1 713 aa24.76■■□□□ 1.55
MRPL54-201ENST00000330133 SGIP1Q9BQI5 828 aa24.75■■□□□ 1.55
MRPL54-201ENST00000330133 USP16Q9Y5T5 823 aa24.75■■□□□ 1.55
MRPL54-201ENST00000330133 UBR3Q6ZT12 1888 aa24.75■■□□□ 1.55
MRPL54-201ENST00000330133 PRAMEF22A3QJZ6 481 aa24.74■■□□□ 1.55
MRPL54-201ENST00000330133 CHL1O00533 1208 aa24.74■■□□□ 1.55
MRPL54-201ENST00000330133 SOS1Q07889 1333 aaPredicted RBP24.74■■□□□ 1.55
MRPL54-201ENST00000330133 A1BGP04217 495 aa24.73■■□□□ 1.55
MRPL54-201ENST00000330133 ARXQ96QS3 562 aa24.73■■□□□ 1.55
MRPL54-201ENST00000330133 SENP3-EIF4A1A0A087X0R7 540 aa24.72■■□□□ 1.55
MRPL54-201ENST00000330133 GIGYF1O75420 1035 aaPredicted RBP24.72■■□□□ 1.55
MRPL54-201ENST00000330133 NCBP3Q53F19 620 aaKnown RBP24.72■■□□□ 1.55
MRPL54-201ENST00000330133 NPM2Q86SE8 214 aaKnown RBP24.72■■□□□ 1.55
MRPL54-201ENST00000330133 CCDC27Q2M243 656 aa24.71■■□□□ 1.55
MRPL54-201ENST00000330133 CFAP44Q96MT7 982 aa24.71■■□□□ 1.55
MRPL54-201ENST00000330133 A0A087WZG4 1122 aa24.7■■□□□ 1.54
MRPL54-201ENST00000330133 ZPR1O75312 459 aa24.7■■□□□ 1.54
MRPL54-201ENST00000330133 NLGN1Q8N2Q7 840 aa24.7■■□□□ 1.54
MRPL54-201ENST00000330133 MYH14Q7Z406 1995 aaKnown RBP24.7■■□□□ 1.54
MRPL54-201ENST00000330133 IL6STP40189 918 aaPredicted RBP24.69■■□□□ 1.54
MRPL54-201ENST00000330133 EIF5P55010 431 aaKnown RBP24.69■■□□□ 1.54
MRPL54-201ENST00000330133 GNAI1P63096 354 aa24.69■■□□□ 1.54
MRPL54-201ENST00000330133 IFT57Q9NWB7 429 aa24.69■■□□□ 1.54
MRPL54-201ENST00000330133 ZNF330Q9Y3S2 320 aaPredicted RBP24.69■■□□□ 1.54
MRPL54-201ENST00000330133 COL15A1P39059 1388 aa24.68■■□□□ 1.54
MRPL54-201ENST00000330133 WWC1Q8IX03 1113 aa24.68■■□□□ 1.54
MRPL54-201ENST00000330133 SRP68Q9UHB9 627 aaKnown RBP24.68■■□□□ 1.54
MRPL54-201ENST00000330133 SALL2Q9Y467 1007 aaPredicted RBP24.68■■□□□ 1.54
MRPL54-201ENST00000330133 KDM3BQ7LBC6 1761 aa24.67■■□□□ 1.54
MRPL54-201ENST00000330133 GYS1P13807 737 aa24.67■■□□□ 1.54
MRPL54-201ENST00000330133 USP42Q9H9J4 1324 aaKnown RBP24.66■■□□□ 1.54
MRPL54-201ENST00000330133 ZNF853P0CG23 659 aa24.66■■□□□ 1.54
MRPL54-201ENST00000330133 MIER1Q8N108 512 aa24.66■■□□□ 1.54
MRPL54-201ENST00000330133 NARFQ9UHQ1 456 aa24.66■■□□□ 1.54
MRPL54-201ENST00000330133 NGEFQ8N5V2 710 aa24.65■■□□□ 1.54
MRPL54-201ENST00000330133 MBIPQ9NS73 344 aa24.65■■□□□ 1.54
MRPL54-201ENST00000330133 PIP4K2AP48426 406 aaPredicted RBP24.64■■□□□ 1.54
MRPL54-201ENST00000330133 USPL1Q5W0Q7 1092 aa24.64■■□□□ 1.54
MRPL54-201ENST00000330133 NBPF26B4DH59 902 aa24.62■■□□□ 1.53
MRPL54-201ENST00000330133 MMP10P09238 476 aa24.62■■□□□ 1.53
MRPL54-201ENST00000330133 EIF2S2P20042 333 aaKnown RBP24.62■■□□□ 1.53
MRPL54-201ENST00000330133 FKBP8Q14318 412 aa24.62■■□□□ 1.53
MRPL54-201ENST00000330133 NBPF10Q6P3W6 841 aaKnown RBP24.62■■□□□ 1.53
MRPL54-201ENST00000330133 KLHL34Q8N239 644 aa24.62■■□□□ 1.53
MRPL54-201ENST00000330133 NBPF15Q8N660 670 aa24.62■■□□□ 1.53
MRPL54-201ENST00000330133 FHDC1Q9C0D6 1143 aaPredicted RBP24.62■■□□□ 1.53
MRPL54-201ENST00000330133 TBC1D2BQ9UPU7 963 aa24.62■■□□□ 1.53
MRPL54-201ENST00000330133 IL16Q14005 1332 aa24.61■■□□□ 1.53
MRPL54-201ENST00000330133 KRT24Q2M2I5 525 aa24.6■■□□□ 1.53
MRPL54-201ENST00000330133 DZIP3Q86Y13 1208 aaKnown RBP24.6■■□□□ 1.53
MRPL54-201ENST00000330133 WDR63Q8IWG1 891 aa24.6■■□□□ 1.53
MRPL54-201ENST00000330133 PARP3Q9Y6F1 533 aa24.6■■□□□ 1.53
MRPL54-201ENST00000330133 SRCAPQ6ZRS2 3230 aa24.6■■□□□ 1.53
MRPL54-201ENST00000330133 ERBB4Q15303 1308 aa24.6■■□□□ 1.53
MRPL54-201ENST00000330133 COL24A1Q17RW2 1714 aa24.59■■□□□ 1.53
MRPL54-201ENST00000330133 SYT17Q9BSW7 474 aa24.59■■□□□ 1.53
MRPL54-201ENST00000330133 HOXB7P09629 217 aa24.58■■□□□ 1.53
MRPL54-201ENST00000330133 DUSP27Q5VZP5 1158 aa24.58■■□□□ 1.53
MRPL54-201ENST00000330133 MYL6BP14649 208 aa24.57■■□□□ 1.52
MRPL54-201ENST00000330133 BCL2L12Q9HB09 334 aa24.57■■□□□ 1.52
MRPL54-201ENST00000330133 TM4SF1P30408 202 aa24.56■■□□□ 1.52
MRPL54-201ENST00000330133 NECTIN2Q92692 538 aa24.56■■□□□ 1.52
MRPL54-201ENST00000330133 C4AP0C0L4 1744 aa24.55■■□□□ 1.52
MRPL54-201ENST00000330133 CAMTA2O94983 1202 aa24.55■■□□□ 1.52
MRPL54-201ENST00000330133 CD2APQ9Y5K6 639 aa24.55■■□□□ 1.52
MRPL54-201ENST00000330133 HDGFL1Q5TGJ6 251 aa24.54■■□□□ 1.52
MRPL54-201ENST00000330133 TSR2Q969E8 191 aaKnown RBP24.54■■□□□ 1.52
MRPL54-201ENST00000330133 LAMB4A4D0S4 1761 aa24.53■■□□□ 1.52
MRPL54-201ENST00000330133 ELL2O00472 640 aaPredicted RBP24.53■■□□□ 1.52
MRPL54-201ENST00000330133 NFIXQ14938 502 aa24.53■■□□□ 1.52
MRPL54-201ENST00000330133 ZNF652Q9Y2D9 606 aa24.53■■□□□ 1.52
MRPL54-201ENST00000330133 KIF6Q6ZMV9 814 aa24.52■■□□□ 1.52
MRPL54-201ENST00000330133 BICDL1Q6ZP65 573 aa24.52■■□□□ 1.52
MRPL54-201ENST00000330133 C8orf58Q8NAV2 365 aa24.52■■□□□ 1.52
MRPL54-201ENST00000330133 CHMP4AQ9BY43 222 aa24.52■■□□□ 1.52
MRPL54-201ENST00000330133 POLRMTO00411 1230 aaKnown RBP24.51■■□□□ 1.51
MRPL54-201ENST00000330133 DDR1Q08345 913 aa24.51■■□□□ 1.51
MRPL54-201ENST00000330133 PDIA6Q15084 440 aa24.51■■□□□ 1.51
MRPL54-201ENST00000330133 CLEC4GQ6UXB4 293 aa24.51■■□□□ 1.51
MRPL54-201ENST00000330133 DDX21Q9NR30 783 aaKnown RBP eCLIP24.51■■□□□ 1.51
MRPL54-201ENST00000330133 DCAF8L1A6NGE4 600 aa24.5■■□□□ 1.51
MRPL54-201ENST00000330133 TBC1D9BQ66K14 1250 aa24.5■■□□□ 1.51
MRPL54-201ENST00000330133 RGL2O15211 777 aa24.49■■□□□ 1.51
MRPL54-201ENST00000330133 ANXA1P04083 346 aa24.49■■□□□ 1.51
MRPL54-201ENST00000330133 GOLGA2Q08379 1002 aa24.49■■□□□ 1.51
MRPL54-201ENST00000330133 PROSER3Q2NL68 480 aa24.49■■□□□ 1.51
MRPL54-201ENST00000330133 TTLL7Q6ZT98 887 aa24.49■■□□□ 1.51
MRPL54-201ENST00000330133 SETDB2Q96T68 719 aa24.49■■□□□ 1.51
MRPL54-201ENST00000330133 DBF4Q9UBU7 674 aaPredicted RBP24.49■■□□□ 1.51
MRPL54-201ENST00000330133 ERVV-1B6SEH8 477 aa24.48■■□□□ 1.51
MRPL54-201ENST00000330133 NLGN2Q8NFZ4 835 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms