RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 COL15A1P39059 1388 aa24.31■■□□□ 1.48
RPA2-201ENST00000313433 PRAMEF22A3QJZ6 481 aa24.31■■□□□ 1.48
RPA2-201ENST00000313433 RFC4P35249 363 aa24.31■■□□□ 1.48
RPA2-201ENST00000313433 N4BP2Q86UW6 1770 aaPredicted RBP24.31■■□□□ 1.48
RPA2-201ENST00000313433 AFDNP55196 1824 aaKnown RBP24.29■■□□□ 1.48
RPA2-201ENST00000313433 FKBP8Q14318 412 aa24.29■■□□□ 1.48
RPA2-201ENST00000313433 FMNL2Q96PY5 1086 aa24.29■■□□□ 1.48
RPA2-201ENST00000313433 CD2APQ9Y5K6 639 aa24.29■■□□□ 1.48
RPA2-201ENST00000313433 CHD4Q14839 1912 aa24.29■■□□□ 1.48
RPA2-201ENST00000313433 BCORQ6W2J9 1755 aa24.29■■□□□ 1.48
RPA2-201ENST00000313433 C10orf71Q711Q0 1435 aa24.28■■□□□ 1.48
RPA2-201ENST00000313433 NRXN2Q9P2S2 1712 aa24.28■■□□□ 1.48
RPA2-201ENST00000313433 MIS18AQ9NYP9 233 aa24.28■■□□□ 1.48
RPA2-201ENST00000313433 NLGN1Q8N2Q7 840 aa24.27■■□□□ 1.48
RPA2-201ENST00000313433 BRCA1P38398 1863 aaKnown RBP24.27■■□□□ 1.48
RPA2-201ENST00000313433 MAPK8IP3Q9UPT6 1336 aa24.27■■□□□ 1.48
RPA2-201ENST00000313433 YBX3P16989 372 aaKnown RBP eCLIP24.26■■□□□ 1.471e-6■■■□□ 17.4
RPA2-201ENST00000313433 CANXP27824 592 aaKnown RBP24.26■■□□□ 1.47
RPA2-201ENST00000313433 EIF5P55010 431 aaKnown RBP24.26■■□□□ 1.47
RPA2-201ENST00000313433 DDR1Q08345 913 aa24.26■■□□□ 1.47
RPA2-201ENST00000313433 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
RPA2-201ENST00000313433 BCL2L12Q9HB09 334 aa24.26■■□□□ 1.47
RPA2-201ENST00000313433 ADAMTS8Q9UP79 889 aa24.26■■□□□ 1.47
RPA2-201ENST00000313433 PXDNLA1KZ92 1463 aa24.26■■□□□ 1.47
RPA2-201ENST00000313433 TAF7Q15545 349 aaPredicted RBP24.25■■□□□ 1.47
RPA2-201ENST00000313433 USPL1Q5W0Q7 1092 aa24.25■■□□□ 1.47
RPA2-201ENST00000313433 USP16Q9Y5T5 823 aa24.25■■□□□ 1.47
RPA2-201ENST00000313433 A1BGP04217 495 aa24.24■■□□□ 1.47
RPA2-201ENST00000313433 STARD3NLO95772 234 aa24.23■■□□□ 1.47
RPA2-201ENST00000313433 TMPOP42166 694 aaKnown RBP24.23■■□□□ 1.47
RPA2-201ENST00000313433 PNNQ9H307 717 aaKnown RBP24.23■■□□□ 1.47
RPA2-201ENST00000313433 NARFQ9UHQ1 456 aa24.23■■□□□ 1.47
RPA2-201ENST00000313433 NEFMP07197 916 aa24.22■■□□□ 1.47
RPA2-201ENST00000313433 TM4SF1P30408 202 aa24.22■■□□□ 1.47
RPA2-201ENST00000313433 TEX13AQ9BXU3 409 aaPredicted RBP24.22■■□□□ 1.47
RPA2-201ENST00000313433 PIP4K2AP48426 406 aaPredicted RBP24.21■■□□□ 1.47
RPA2-201ENST00000313433 RRP7AQ9Y3A4 280 aaKnown RBP24.21■■□□□ 1.47
RPA2-201ENST00000313433 POLRMTO00411 1230 aaKnown RBP24.2■■□□□ 1.46
RPA2-201ENST00000313433 RIPK4P57078 832 aa24.2■■□□□ 1.46
RPA2-201ENST00000313433 GPR162Q16538 588 aa24.2■■□□□ 1.46
RPA2-201ENST00000313433 DCAF8L1A6NGE4 600 aa24.19■■□□□ 1.46
RPA2-201ENST00000313433 ZPR1O75312 459 aa24.18■■□□□ 1.46
RPA2-201ENST00000313433 SNRPA1P09661 255 aaKnown RBP24.18■■□□□ 1.46
RPA2-201ENST00000313433 WDR43Q15061 677 aaKnown RBP eCLIP24.18■■□□□ 1.46
RPA2-201ENST00000313433 PELP1Q8IZL8 1130 aaKnown RBP24.18■■□□□ 1.46
RPA2-201ENST00000313433 RUNDC1Q96C34 613 aa24.18■■□□□ 1.46
RPA2-201ENST00000313433 TRIM35Q9UPQ4 493 aa24.18■■□□□ 1.46
RPA2-201ENST00000313433 NBPF26B4DH59 902 aa24.17■■□□□ 1.46
RPA2-201ENST00000313433 ANP32CO43423 234 aa24.17■■□□□ 1.46
RPA2-201ENST00000313433 YY1P25490 414 aa24.17■■□□□ 1.46
RPA2-201ENST00000313433 IL6STP40189 918 aaPredicted RBP24.17■■□□□ 1.46
RPA2-201ENST00000313433 EIF4A1P60842 406 aaKnown RBP24.17■■□□□ 1.46
RPA2-201ENST00000313433 NFIXQ14938 502 aa24.17■■□□□ 1.46
RPA2-201ENST00000313433 NBPF10Q6P3W6 841 aaKnown RBP24.17■■□□□ 1.46
RPA2-201ENST00000313433 NBPF15Q8N660 670 aa24.17■■□□□ 1.46
RPA2-201ENST00000313433 WWC3Q9ULE0 1092 aa24.17■■□□□ 1.46
RPA2-201ENST00000313433 PARP3Q9Y6F1 533 aa24.17■■□□□ 1.46
RPA2-201ENST00000313433 ANKRD31Q8N7Z5 1873 aa24.17■■□□□ 1.46
RPA2-201ENST00000313433 TBC1D2BQ9UPU7 963 aa24.15■■□□□ 1.46
RPA2-201ENST00000313433 DLEC1Q9Y238 1755 aa24.15■■□□□ 1.46
RPA2-201ENST00000313433 PNISRQ8TF01 805 aaKnown RBP24.14■■□□□ 1.45
RPA2-201ENST00000313433 GIGYF1O75420 1035 aaPredicted RBP24.13■■□□□ 1.45
RPA2-201ENST00000313433 CAMTA2O94983 1202 aa24.13■■□□□ 1.45
RPA2-201ENST00000313433 NEUROD2Q15784 382 aa24.13■■□□□ 1.45
RPA2-201ENST00000313433 ZNF330Q9Y3S2 320 aaPredicted RBP24.13■■□□□ 1.45
RPA2-201ENST00000313433 CARMIL3Q8ND23 1372 aa24.13■■□□□ 1.45
RPA2-201ENST00000313433 KCNA3P22001 575 aa24.12■■□□□ 1.45
RPA2-201ENST00000313433 ARFGEF1Q9Y6D6 1849 aa24.12■■□□□ 1.45
RPA2-201ENST00000313433 COL11A2P13942 1736 aaPredicted RBP24.11■■□□□ 1.45
RPA2-201ENST00000313433 A0A087WZG4 1122 aa24.11■■□□□ 1.45
RPA2-201ENST00000313433 A0A0G2JLW4 131 aa24.11■■□□□ 1.45
RPA2-201ENST00000313433 DPEP1P16444 411 aa24.11■■□□□ 1.45
RPA2-201ENST00000313433 TBC1D9BQ66K14 1250 aa24.11■■□□□ 1.45
RPA2-201ENST00000313433 TGFB2P61812 414 aa24.1■■□□□ 1.45
RPA2-201ENST00000313433 MRS2Q9HD23 443 aa24.09■■□□□ 1.45
RPA2-201ENST00000313433 TSPYL4Q9UJ04 414 aa24.09■■□□□ 1.45
RPA2-201ENST00000313433 SENP3-EIF4A1A0A087X0R7 540 aa24.08■■□□□ 1.45
RPA2-201ENST00000313433 LMOD3Q0VAK6 560 aa24.08■■□□□ 1.45
RPA2-201ENST00000313433 DZIP3Q86Y13 1208 aaKnown RBP24.08■■□□□ 1.45
RPA2-201ENST00000313433 NUP98P52948 1817 aa24.07■■□□□ 1.44
RPA2-201ENST00000313433 BICDL1Q6ZP65 573 aa24.07■■□□□ 1.44
RPA2-201ENST00000313433 APAF1O14727 1248 aa24.06■■□□□ 1.44
RPA2-201ENST00000313433 SERPINB2P05120 415 aa24.06■■□□□ 1.44
RPA2-201ENST00000313433 CHL1O00533 1208 aa24.05■■□□□ 1.44
RPA2-201ENST00000313433 GRIN3BO60391 1043 aa24.05■■□□□ 1.44
RPA2-201ENST00000313433 CHRNA5P30532 468 aa24.05■■□□□ 1.44
RPA2-201ENST00000313433 KRT24Q2M2I5 525 aa24.05■■□□□ 1.44
RPA2-201ENST00000313433 BABAM1Q9NWV8 329 aa24.05■■□□□ 1.44
RPA2-201ENST00000313433 LRP10Q7Z4F1 713 aa24.03■■□□□ 1.44
RPA2-201ENST00000313433 PDIA6Q15084 440 aa24.01■■□□□ 1.43
RPA2-201ENST00000313433 ZNF784Q8NCA9 323 aaPredicted RBP24.01■■□□□ 1.43
RPA2-201ENST00000313433 HLFQ16534 295 aa24■■□□□ 1.43
RPA2-201ENST00000313433 PROSER3Q2NL68 480 aa24■■□□□ 1.43
RPA2-201ENST00000313433 PRR5LQ6MZQ0 368 aa24■■□□□ 1.43
RPA2-201ENST00000313433 TTLL7Q6ZT98 887 aa24■■□□□ 1.43
RPA2-201ENST00000313433 CCDC24Q8N4L8 307 aa24■■□□□ 1.43
RPA2-201ENST00000313433 BCS1LQ9Y276 419 aa24■■□□□ 1.43
RPA2-201ENST00000313433 ZNF853P0CG23 659 aa23.99■■□□□ 1.43
RPA2-201ENST00000313433 ADCY9O60503 1353 aa23.99■■□□□ 1.43
RPA2-201ENST00000313433 TNRC6CQ9HCJ0 1690 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms