RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 LAMB4A4D0S4 1761 aa22.74■■□□□ 1.23
SWSAP1-201ENST00000312423 ZNF853P0CG23 659 aa22.74■■□□□ 1.23
SWSAP1-201ENST00000312423 RTCBQ9Y3I0 505 aaKnown RBP22.74■■□□□ 1.23
SWSAP1-201ENST00000312423 PNPLA7Q6ZV29 1317 aa22.74■■□□□ 1.23
SWSAP1-201ENST00000312423 SMIM5Q71RC9 77 aa22.73■■□□□ 1.23
SWSAP1-201ENST00000312423 USP16Q9Y5T5 823 aa22.73■■□□□ 1.23
SWSAP1-201ENST00000312423 IL16Q14005 1332 aa22.73■■□□□ 1.23
SWSAP1-201ENST00000312423 GIGYF1O75420 1035 aaPredicted RBP22.72■■□□□ 1.23
SWSAP1-201ENST00000312423 INTS5Q6P9B9 1019 aaKnown RBP22.72■■□□□ 1.23
SWSAP1-201ENST00000312423 PDGFDQ9GZP0 370 aaPredicted RBP22.72■■□□□ 1.23
SWSAP1-201ENST00000312423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.71■■□□□ 1.23
SWSAP1-201ENST00000312423 CANXP27824 592 aaKnown RBP22.71■■□□□ 1.23
SWSAP1-201ENST00000312423 AMIGO3Q86WK7 504 aa22.71■■□□□ 1.23
SWSAP1-201ENST00000312423 TSR2Q969E8 191 aaKnown RBP22.71■■□□□ 1.23
SWSAP1-201ENST00000312423 CASZ1Q86V15 1759 aa22.71■■□□□ 1.23
SWSAP1-201ENST00000312423 SSFA2P28290 1259 aa22.71■■□□□ 1.23
SWSAP1-201ENST00000312423 KRT24Q2M2I5 525 aa22.71■■□□□ 1.23
SWSAP1-201ENST00000312423 FLAD1Q8NFF5 587 aa22.71■■□□□ 1.23
SWSAP1-201ENST00000312423 ZBTB1Q9Y2K1 713 aa22.71■■□□□ 1.23
SWSAP1-201ENST00000312423 RPS6KA4O75676 772 aa22.7■■□□□ 1.22
SWSAP1-201ENST00000312423 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
SWSAP1-201ENST00000312423 ZNF330Q9Y3S2 320 aaPredicted RBP22.7■■□□□ 1.22
SWSAP1-201ENST00000312423 A1BGP04217 495 aa22.69■■□□□ 1.22
SWSAP1-201ENST00000312423 COL23A1Q86Y22 540 aaPredicted RBP22.69■■□□□ 1.22
SWSAP1-201ENST00000312423 TRAPPC3LQ5T215 181 aa22.68■■□□□ 1.22
SWSAP1-201ENST00000312423 ZNF521Q96K83 1311 aa22.68■■□□□ 1.22
SWSAP1-201ENST00000312423 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
SWSAP1-201ENST00000312423 PIP4K2AP48426 406 aaPredicted RBP22.68■■□□□ 1.22
SWSAP1-201ENST00000312423 ZBTB7AO95365 584 aa22.67■■□□□ 1.22
SWSAP1-201ENST00000312423 NPM2Q86SE8 214 aaKnown RBP22.67■■□□□ 1.22
SWSAP1-201ENST00000312423 SOS1Q07889 1333 aaPredicted RBP22.66■■□□□ 1.22
SWSAP1-201ENST00000312423 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
SWSAP1-201ENST00000312423 ADRA2BP18089 450 aa22.66■■□□□ 1.22
SWSAP1-201ENST00000312423 MYH16Q9H6N6 1097 aa22.66■■□□□ 1.22
SWSAP1-201ENST00000312423 ELL2O00472 640 aaPredicted RBP22.65■■□□□ 1.22
SWSAP1-201ENST00000312423 RFC4P35249 363 aa22.65■■□□□ 1.22
SWSAP1-201ENST00000312423 GOLGA2Q08379 1002 aa22.65■■□□□ 1.22
SWSAP1-201ENST00000312423 DUSP27Q5VZP5 1158 aa22.65■■□□□ 1.22
SWSAP1-201ENST00000312423 NECTIN2Q92692 538 aa22.65■■□□□ 1.22
SWSAP1-201ENST00000312423 SPINK5Q9NQ38 1064 aaPredicted RBP22.65■■□□□ 1.22
SWSAP1-201ENST00000312423 C4AP0C0L4 1744 aa22.65■■□□□ 1.22
SWSAP1-201ENST00000312423 COL15A1P39059 1388 aa22.65■■□□□ 1.22
SWSAP1-201ENST00000312423 ARHGEF1Q92888 912 aaKnown RBP22.65■■□□□ 1.22
SWSAP1-201ENST00000312423 ARXQ96QS3 562 aa22.64■■□□□ 1.21
SWSAP1-201ENST00000312423 C8orf58Q8NAV2 365 aa22.63■■□□□ 1.21
SWSAP1-201ENST00000312423 HOXB7P09629 217 aa22.62■■□□□ 1.21
SWSAP1-201ENST00000312423 IL6STP40189 918 aaPredicted RBP22.62■■□□□ 1.21
SWSAP1-201ENST00000312423 HDGFL1Q5TGJ6 251 aa22.62■■□□□ 1.21
SWSAP1-201ENST00000312423 SLC16A10Q8TF71 515 aa22.62■■□□□ 1.21
SWSAP1-201ENST00000312423 MTFR1LQ9H019 292 aa22.62■■□□□ 1.21
SWSAP1-201ENST00000312423 ATF5Q9Y2D1 282 aaPredicted RBP22.62■■□□□ 1.21
SWSAP1-201ENST00000312423 MSL1Q68DK7 614 aa22.62■■□□□ 1.21
SWSAP1-201ENST00000312423 NBPF26B4DH59 902 aa22.61■■□□□ 1.21
SWSAP1-201ENST00000312423 E9PSI1 815 aa22.61■■□□□ 1.21
SWSAP1-201ENST00000312423 MYL6BP14649 208 aa22.61■■□□□ 1.21
SWSAP1-201ENST00000312423 EIF5P55010 431 aaKnown RBP22.61■■□□□ 1.21
SWSAP1-201ENST00000312423 NBPF10Q6P3W6 841 aaKnown RBP22.61■■□□□ 1.21
SWSAP1-201ENST00000312423 NBPF15Q8N660 670 aa22.61■■□□□ 1.21
SWSAP1-201ENST00000312423 ZPR1O75312 459 aa22.6■■□□□ 1.21
SWSAP1-201ENST00000312423 SPON1Q9HCB6 807 aa22.6■■□□□ 1.21
SWSAP1-201ENST00000312423 A0A087WZG4 1122 aa22.59■■□□□ 1.21
SWSAP1-201ENST00000312423 TSPYL6Q8N831 410 aa22.59■■□□□ 1.21
SWSAP1-201ENST00000312423 SRP68Q9UHB9 627 aaKnown RBP22.59■■□□□ 1.21
SWSAP1-201ENST00000312423 ERBB4Q15303 1308 aa22.59■■□□□ 1.21
SWSAP1-201ENST00000312423 EXOSC9Q06265 439 aaKnown RBP22.58■■□□□ 1.21
SWSAP1-201ENST00000312423 TWISTNBQ3B726 338 aaPredicted RBP22.58■■□□□ 1.21
SWSAP1-201ENST00000312423 CDCA7LQ96GN5 454 aa22.58■■□□□ 1.21
SWSAP1-201ENST00000312423 TBC1D2BQ9UPU7 963 aa22.58■■□□□ 1.2
SWSAP1-201ENST00000312423 USP42Q9H9J4 1324 aaKnown RBP22.57■■□□□ 1.2
SWSAP1-201ENST00000312423 SLFN5Q08AF3 891 aa22.57■■□□□ 1.2
SWSAP1-201ENST00000312423 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
SWSAP1-201ENST00000312423 ANXA1P04083 346 aa22.56■■□□□ 1.2
SWSAP1-201ENST00000312423 USPL1Q5W0Q7 1092 aa22.56■■□□□ 1.2
SWSAP1-201ENST00000312423 DZIP3Q86Y13 1208 aaKnown RBP22.56■■□□□ 1.2
SWSAP1-201ENST00000312423 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
SWSAP1-201ENST00000312423 PROSER3Q2NL68 480 aa22.55■■□□□ 1.2
SWSAP1-201ENST00000312423 NARFQ9UHQ1 456 aa22.55■■□□□ 1.2
SWSAP1-201ENST00000312423 CHMP4AQ9BY43 222 aa22.55■■□□□ 1.2
SWSAP1-201ENST00000312423 GYS1P13807 737 aa22.54■■□□□ 1.2
SWSAP1-201ENST00000312423 POLD1P28340 1107 aa22.54■■□□□ 1.2
SWSAP1-201ENST00000312423 CCDC30Q5VVM6 783 aa22.54■■□□□ 1.2
SWSAP1-201ENST00000312423 DDX21Q9NR30 783 aaKnown RBP eCLIP22.54■■□□□ 1.2
SWSAP1-201ENST00000312423 DBF4Q9UBU7 674 aaPredicted RBP22.54■■□□□ 1.2
SWSAP1-201ENST00000312423 SCN7AQ01118 1682 aa22.53■■□□□ 1.2
SWSAP1-201ENST00000312423 PDIA6Q15084 440 aa22.53■■□□□ 1.2
SWSAP1-201ENST00000312423 ZBED9Q6R2W3 1325 aa22.53■■□□□ 1.2
SWSAP1-201ENST00000312423 LRP5O75197 1615 aa22.53■■□□□ 1.2
SWSAP1-201ENST00000312423 KIF6Q6ZMV9 814 aa22.52■■□□□ 1.2
SWSAP1-201ENST00000312423 NLGN1Q8N2Q7 840 aa22.52■■□□□ 1.2
SWSAP1-201ENST00000312423 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.2
SWSAP1-201ENST00000312423 FKBP8Q14318 412 aa22.52■■□□□ 1.2
SWSAP1-201ENST00000312423 BCORQ6W2J9 1755 aa22.52■■□□□ 1.2
SWSAP1-201ENST00000312423 STK31Q9BXU1 1019 aa22.52■■□□□ 1.2
SWSAP1-201ENST00000312423 PPP1R1BQ9UD71 204 aaPredicted RBP22.52■■□□□ 1.2
SWSAP1-201ENST00000312423 PTGER2P43116 358 aa22.51■■□□□ 1.19
SWSAP1-201ENST00000312423 AIMP1Q12904 312 aaKnown RBP22.51■■□□□ 1.19
SWSAP1-201ENST00000312423 TTLL7Q6ZT98 887 aa22.5■■□□□ 1.19
SWSAP1-201ENST00000312423 COL24A1Q17RW2 1714 aa22.5■■□□□ 1.19
SWSAP1-201ENST00000312423 CAMTA2O94983 1202 aa22.49■■□□□ 1.19
SWSAP1-201ENST00000312423 XAGE3Q8WTP9 111 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms