RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 USP42Q9H9J4 1324 aaKnown RBP21.13■□□□□ 0.97
SRGAP2C-201ENST00000304465 MAPK8IP3Q9UPT6 1336 aa21.13■□□□□ 0.97
SRGAP2C-201ENST00000304465 GRIN3BO60391 1043 aa21.13■□□□□ 0.97
SRGAP2C-201ENST00000304465 SRP68Q9UHB9 627 aaKnown RBP21.13■□□□□ 0.97
SRGAP2C-201ENST00000304465 MYH14Q7Z406 1995 aaKnown RBP21.12■□□□□ 0.97
SRGAP2C-201ENST00000304465 HEG1Q9ULI3 1381 aa21.11■□□□□ 0.97
SRGAP2C-201ENST00000304465 SOS1Q07889 1333 aaPredicted RBP21.11■□□□□ 0.97
SRGAP2C-201ENST00000304465 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
SRGAP2C-201ENST00000304465 NPM2Q86SE8 214 aaKnown RBP21.11■□□□□ 0.97
SRGAP2C-201ENST00000304465 ZBTB1Q9Y2K1 713 aa21.11■□□□□ 0.97
SRGAP2C-201ENST00000304465 DCTN1Q14203 1278 aa21.1■□□□□ 0.97
SRGAP2C-201ENST00000304465 COL15A1P39059 1388 aa21.09■□□□□ 0.97
SRGAP2C-201ENST00000304465 YBX3P16989 372 aaKnown RBP eCLIP21.08■□□□□ 0.97
SRGAP2C-201ENST00000304465 FKBP8Q14318 412 aa21.08■□□□□ 0.97
SRGAP2C-201ENST00000304465 USPL1Q5W0Q7 1092 aa21.08■□□□□ 0.97
SRGAP2C-201ENST00000304465 ADAMTS8Q9UP79 889 aa21.08■□□□□ 0.97
SRGAP2C-201ENST00000304465 PLEKHF1Q96S99 279 aa21.07■□□□□ 0.96
SRGAP2C-201ENST00000304465 ZNF330Q9Y3S2 320 aaPredicted RBP21.07■□□□□ 0.96
SRGAP2C-201ENST00000304465 UBR2Q8IWV8 1755 aa21.07■□□□□ 0.96
SRGAP2C-201ENST00000304465 A0A087WZG4 1122 aa21.07■□□□□ 0.96
SRGAP2C-201ENST00000304465 TAF7Q15545 349 aaPredicted RBP21.07■□□□□ 0.96
SRGAP2C-201ENST00000304465 NFE2L2Q16236 605 aa21.07■□□□□ 0.96
SRGAP2C-201ENST00000304465 NARFQ9UHQ1 456 aa21.07■□□□□ 0.96
SRGAP2C-201ENST00000304465 C4AP0C0L4 1744 aa21.06■□□□□ 0.96
SRGAP2C-201ENST00000304465 KCNQ3O43525 872 aa21.06■□□□□ 0.96
SRGAP2C-201ENST00000304465 TGFB2P61812 414 aa21.06■□□□□ 0.96
SRGAP2C-201ENST00000304465 HNRNPUQ00839 825 aaKnown RBP eCLIP21.06■□□□□ 0.96
SRGAP2C-201ENST00000304465 WWC3Q9ULE0 1092 aa21.06■□□□□ 0.96
SRGAP2C-201ENST00000304465 SIPA1L3O60292 1781 aaPredicted RBP21.05■□□□□ 0.96
SRGAP2C-201ENST00000304465 SNRPA1P09661 255 aaKnown RBP21.04■□□□□ 0.96
SRGAP2C-201ENST00000304465 WDR43Q15061 677 aaKnown RBP eCLIP21.04■□□□□ 0.96
SRGAP2C-201ENST00000304465 EIF5P55010 431 aaKnown RBP21.03■□□□□ 0.96
SRGAP2C-201ENST00000304465 IL6STP40189 918 aaPredicted RBP21.02■□□□□ 0.96
SRGAP2C-201ENST00000304465 C10orf71Q711Q0 1435 aa21.02■□□□□ 0.96
SRGAP2C-201ENST00000304465 A0A0G2JLW4 131 aa21.01■□□□□ 0.95
SRGAP2C-201ENST00000304465 A1BGP04217 495 aa21.01■□□□□ 0.95
SRGAP2C-201ENST00000304465 TM4SF1P30408 202 aa21.01■□□□□ 0.95
SRGAP2C-201ENST00000304465 DDR1Q08345 913 aa21.01■□□□□ 0.95
SRGAP2C-201ENST00000304465 POLRMTO00411 1230 aaKnown RBP21.01■□□□□ 0.95
SRGAP2C-201ENST00000304465 USP16Q9Y5T5 823 aa21.01■□□□□ 0.95
SRGAP2C-201ENST00000304465 CHD4Q14839 1912 aa21■□□□□ 0.95
SRGAP2C-201ENST00000304465 ZNF784Q8NCA9 323 aaPredicted RBP21■□□□□ 0.95
SRGAP2C-201ENST00000304465 MIS18AQ9NYP9 233 aa21■□□□□ 0.95
SRGAP2C-201ENST00000304465 PXDNLA1KZ92 1463 aa21■□□□□ 0.95
SRGAP2C-201ENST00000304465 CENPBP07199 599 aaPredicted RBP20.99■□□□□ 0.95
SRGAP2C-201ENST00000304465 RIPK4P57078 832 aa20.99■□□□□ 0.95
SRGAP2C-201ENST00000304465 LMOD3Q0VAK6 560 aa20.99■□□□□ 0.95
SRGAP2C-201ENST00000304465 NFIXQ14938 502 aa20.99■□□□□ 0.95
SRGAP2C-201ENST00000304465 ZBED9Q6R2W3 1325 aa20.99■□□□□ 0.95
SRGAP2C-201ENST00000304465 DPEP1P16444 411 aa20.98■□□□□ 0.95
SRGAP2C-201ENST00000304465 BICDL1Q6ZP65 573 aa20.98■□□□□ 0.95
SRGAP2C-201ENST00000304465 THUMPD2Q9BTF0 503 aaKnown RBP20.98■□□□□ 0.95
SRGAP2C-201ENST00000304465 TBC1D2BQ9UPU7 963 aa20.98■□□□□ 0.95
SRGAP2C-201ENST00000304465 BCS1LQ9Y276 419 aa20.98■□□□□ 0.95
SRGAP2C-201ENST00000304465 UTRNP46939 3433 aa20.97■□□□□ 0.95
SRGAP2C-201ENST00000304465 BCL2L12Q9HB09 334 aa20.97■□□□□ 0.95
SRGAP2C-201ENST00000304465 PRAMEF22A3QJZ6 481 aa20.96■□□□□ 0.95
SRGAP2C-201ENST00000304465 DZIP3Q86Y13 1208 aaKnown RBP20.96■□□□□ 0.95
SRGAP2C-201ENST00000304465 SERPINB2P05120 415 aa20.95■□□□□ 0.94
SRGAP2C-201ENST00000304465 TMPOP42166 694 aaKnown RBP20.95■□□□□ 0.94
SRGAP2C-201ENST00000304465 CCDC146Q8IYE0 955 aa20.95■□□□□ 0.94
SRGAP2C-201ENST00000304465 PIP4K2AP48426 406 aaPredicted RBP20.94■□□□□ 0.94
SRGAP2C-201ENST00000304465 RUNDC1Q96C34 613 aa20.94■□□□□ 0.94
SRGAP2C-201ENST00000304465 PIM2Q9P1W9 311 aa20.94■□□□□ 0.94
SRGAP2C-201ENST00000304465 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
SRGAP2C-201ENST00000304465 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
SRGAP2C-201ENST00000304465 NPHP1O15259 732 aa20.94■□□□□ 0.94
SRGAP2C-201ENST00000304465 NEUROD2Q15784 382 aa20.94■□□□□ 0.94
SRGAP2C-201ENST00000304465 DLG5Q8TDM6 1919 aa20.93■□□□□ 0.94
SRGAP2C-201ENST00000304465 TBC1D9BQ66K14 1250 aa20.93■□□□□ 0.94
SRGAP2C-201ENST00000304465 TSPYL4Q9UJ04 414 aa20.93■□□□□ 0.94
SRGAP2C-201ENST00000304465 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
SRGAP2C-201ENST00000304465 SETDB2Q96T68 719 aa20.92■□□□□ 0.94
SRGAP2C-201ENST00000304465 ZNF652Q9Y2D9 606 aa20.92■□□□□ 0.94
SRGAP2C-201ENST00000304465 RRP7AQ9Y3A4 280 aaKnown RBP20.92■□□□□ 0.94
SRGAP2C-201ENST00000304465 GOLGB1Q14789 3259 aaKnown RBP20.92■□□□□ 0.94
SRGAP2C-201ENST00000304465 N4BP2Q86UW6 1770 aaPredicted RBP20.91■□□□□ 0.94
SRGAP2C-201ENST00000304465 CAMTA2O94983 1202 aa20.91■□□□□ 0.94
SRGAP2C-201ENST00000304465 DALRD3Q5D0E6 543 aaKnown RBP20.91■□□□□ 0.94
SRGAP2C-201ENST00000304465 GIGYF1O75420 1035 aaPredicted RBP20.9■□□□□ 0.94
SRGAP2C-201ENST00000304465 CHRNA5P30532 468 aa20.9■□□□□ 0.94
SRGAP2C-201ENST00000304465 ARHGAP27Q6ZUM4 889 aa20.9■□□□□ 0.94
SRGAP2C-201ENST00000304465 CARMIL3Q8ND23 1372 aa20.9■□□□□ 0.94
SRGAP2C-201ENST00000304465 KCNA3P22001 575 aa20.89■□□□□ 0.94
SRGAP2C-201ENST00000304465 NBPF26B4DH59 902 aa20.88■□□□□ 0.93
SRGAP2C-201ENST00000304465 NBPF10Q6P3W6 841 aaKnown RBP20.88■□□□□ 0.93
SRGAP2C-201ENST00000304465 CLEC4GQ6UXB4 293 aa20.88■□□□□ 0.93
SRGAP2C-201ENST00000304465 NBPF15Q8N660 670 aa20.88■□□□□ 0.93
SRGAP2C-201ENST00000304465 BABAM1Q9NWV8 329 aa20.88■□□□□ 0.93
SRGAP2C-201ENST00000304465 KIAA1551Q9HCM1 1747 aa20.87■□□□□ 0.93
SRGAP2C-201ENST00000304465 H0YIN7 160 aa20.87■□□□□ 0.93
SRGAP2C-201ENST00000304465 APAF1O14727 1248 aa20.87■□□□□ 0.93
SRGAP2C-201ENST00000304465 NGEFQ8N5V2 710 aa20.87■□□□□ 0.93
SRGAP2C-201ENST00000304465 SCN7AQ01118 1682 aa20.86■□□□□ 0.93
SRGAP2C-201ENST00000304465 C2CD5Q86YS7 1000 aa20.86■□□□□ 0.93
SRGAP2C-201ENST00000304465 CNBD1Q8NA66 436 aa20.86■□□□□ 0.93
SRGAP2C-201ENST00000304465 LAS1LQ9Y4W2 734 aaKnown RBP20.86■□□□□ 0.93
SRGAP2C-201ENST00000304465 KDM3BQ7LBC6 1761 aa20.86■□□□□ 0.93
SRGAP2C-201ENST00000304465 ZNF521Q96K83 1311 aa20.85■□□□□ 0.93
SRGAP2C-201ENST00000304465 PDE6BP35913 854 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms