RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 NLRP1Q9C000 1473 aa13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 USP48Q86UV5 1035 aa13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 CHPF2Q9P2E5 772 aa13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 BTBD11A6QL63 1104 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 CCDC39Q9UFE4 941 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 MAP3K19Q56UN5 1328 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 GUCY1B3Q02153 619 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 KLHDC4Q8TBB5 520 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 RUFY2Q8WXA3 655 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 FSD2A1L4K1 749 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 TRIM5Q9C035 493 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 PPLO60437 1756 aa13.61□□□□□ -0.23
ATP1A3-201ENST00000302102 CWF19L2Q2TBE0 894 aaKnown RBP13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 WDR33Q9C0J8 1336 aaKnown RBP13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 GNL2Q13823 731 aaKnown RBP13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 SF3A1Q15459 793 aaKnown RBP13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 TOMM22Q9NS69 142 aa13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 PDRG1Q9NUG6 133 aa13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 RAB11FIP4Q86YS3 637 aa13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 KIF2CQ99661 725 aa13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 ATP6V1DQ9Y5K8 247 aa13.6□□□□□ -0.23
ATP1A3-201ENST00000302102 ZFYVE9O95405 1425 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 PLEKHG1Q9ULL1 1385 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 BECN2A8MW95 431 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 NRXN1Q9ULB1 1477 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 NBPF7P0C2Y1 421 aaPredicted RBP13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 NEXNQ0ZGT2 675 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 SLC39A6Q13433 755 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 GPT2Q8TD30 523 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 ZBTB9Q96C00 473 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 PKNOX2Q96KN3 472 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 CYP46A1Q9Y6A2 500 aa13.59□□□□□ -0.23
ATP1A3-201ENST00000302102 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.23
ATP1A3-201ENST00000302102 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.23
ATP1A3-201ENST00000302102 DNM1Q05193 864 aaKnown RBP13.58□□□□□ -0.24
ATP1A3-201ENST00000302102 RHPN1Q8TCX5 695 aa13.58□□□□□ -0.24
ATP1A3-201ENST00000302102 ADGRB1O14514 1584 aa13.58□□□□□ -0.24
ATP1A3-201ENST00000302102 IGSF3O75054 1194 aa13.58□□□□□ -0.24
ATP1A3-201ENST00000302102 RAB11FIP3O75154 756 aa13.58□□□□□ -0.24
ATP1A3-201ENST00000302102 CHMLP26374 656 aa13.58□□□□□ -0.24
ATP1A3-201ENST00000302102 TAF7LQ5H9L4 462 aa13.58□□□□□ -0.24
ATP1A3-201ENST00000302102 PTPRMP28827 1452 aa13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 GOLGA6L19H0YKK7 550 aa13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 KCNQ3O43525 872 aa13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 ADCY5O95622 1261 aa13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 ISY1Q9ULR0 285 aaKnown RBP13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 ATP5J2-PTCD1G3V325 749 aa13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 CHL1O00533 1208 aa13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 GJB2P29033 226 aa13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 CHMP4CQ96CF2 233 aa13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 LGR6Q9HBX8 967 aa13.57□□□□□ -0.24
ATP1A3-201ENST00000302102 C3P01024 1663 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 MCM2P49736 904 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 AK2P54819 239 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 LRSAM1Q6UWE0 723 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 FILIP1Q7Z7B0 1213 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 ABCC4O15439 1325 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 PTPRCP08575 1304 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 RRP9O43818 475 aaKnown RBP13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 ATF3P18847 181 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 KIF1BPQ96EK5 621 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 PRR36Q9H6K5 1346 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 ADAMTS13Q76LX8 1427 aa13.56□□□□□ -0.24
ATP1A3-201ENST00000302102 STX6O43752 255 aa13.55□□□□□ -0.24
ATP1A3-201ENST00000302102 CBX1P83916 185 aa13.55□□□□□ -0.24
ATP1A3-201ENST00000302102 TTC5Q8N0Z6 440 aa13.55□□□□□ -0.24
ATP1A3-201ENST00000302102 EDC3Q96F86 508 aaKnown RBP13.55□□□□□ -0.24
ATP1A3-201ENST00000302102 APPP05067 770 aa13.55□□□□□ -0.24
ATP1A3-201ENST00000302102 TPM2P07951 284 aa13.55□□□□□ -0.24
ATP1A3-201ENST00000302102 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
ATP1A3-201ENST00000302102 ATP2B1P20020 1258 aa13.55□□□□□ -0.24
ATP1A3-201ENST00000302102 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
ATP1A3-201ENST00000302102 LAMC1P11047 1609 aa13.54□□□□□ -0.24
ATP1A3-201ENST00000302102 TULP1O00294 542 aaPredicted RBP13.54□□□□□ -0.24
ATP1A3-201ENST00000302102 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
ATP1A3-201ENST00000302102 DDX17Q92841 729 aaKnown RBP13.54□□□□□ -0.24
ATP1A3-201ENST00000302102 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
ATP1A3-201ENST00000302102 CCT2P78371 535 aaKnown RBP13.54□□□□□ -0.24
ATP1A3-201ENST00000302102 BLOC1S2Q6QNY1 142 aa13.54□□□□□ -0.24
ATP1A3-201ENST00000302102 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
ATP1A3-201ENST00000302102 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
ATP1A3-201ENST00000302102 GOLGA6L6A8MZA4 724 aa13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 CSPP1Q1MSJ5 1256 aa13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 TNMDQ9H2S6 317 aa13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 RTL1A6NKG5 1358 aa13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 ZHX1Q9UKY1 873 aaPredicted RBP13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 IQGAP1P46940 1657 aa13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 CHST3Q7LGC8 479 aa13.53□□□□□ -0.24
ATP1A3-201ENST00000302102 RNF20Q5VTR2 975 aa13.52□□□□□ -0.24
ATP1A3-201ENST00000302102 ISM2Q6H9L7 571 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms