RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 STARD3NLO95772 234 aa23.24■■□□□ 1.31
TMED3-201ENST00000299705 KCNQ4P56696 695 aa23.24■■□□□ 1.31
TMED3-201ENST00000299705 TAF1LQ8IZX4 1826 aa23.23■■□□□ 1.31
TMED3-201ENST00000299705 RREB1Q92766 1687 aa23.23■■□□□ 1.31
TMED3-201ENST00000299705 CYP19A1P11511 503 aaPredicted RBP23.23■■□□□ 1.31
TMED3-201ENST00000299705 LINC00116Q8NCU8 138 aa23.22■■□□□ 1.31
TMED3-201ENST00000299705 ZNF428Q96B54 188 aa23.21■■□□□ 1.31
TMED3-201ENST00000299705 RC3H1Q5TC82 1133 aaKnown RBP23.2■■□□□ 1.3
TMED3-201ENST00000299705 CNTNAP4Q9C0A0 1308 aa23.2■■□□□ 1.3
TMED3-201ENST00000299705 EIF2S2P20042 333 aaKnown RBP23.19■■□□□ 1.3
TMED3-201ENST00000299705 HDGFL1Q5TGJ6 251 aa23.19■■□□□ 1.3
TMED3-201ENST00000299705 ERBB4Q15303 1308 aa23.19■■□□□ 1.3
TMED3-201ENST00000299705 C4BP0C0L5 1744 aa23.19■■□□□ 1.3
TMED3-201ENST00000299705 CRKLP46109 303 aaKnown RBP23.18■■□□□ 1.3
TMED3-201ENST00000299705 CCDC30Q5VVM6 783 aa23.17■■□□□ 1.3
TMED3-201ENST00000299705 CCDC87Q9NVE4 849 aa23.17■■□□□ 1.3
TMED3-201ENST00000299705 NUP188Q5SRE5 1749 aa23.17■■□□□ 1.3
TMED3-201ENST00000299705 INTS5Q6P9B9 1019 aaKnown RBP23.17■■□□□ 1.3
TMED3-201ENST00000299705 A1BGP04217 495 aa23.16■■□□□ 1.3
TMED3-201ENST00000299705 NECTIN2Q92692 538 aa23.15■■□□□ 1.3
TMED3-201ENST00000299705 DBF4Q9UBU7 674 aaPredicted RBP23.15■■□□□ 1.3
TMED3-201ENST00000299705 MYH14Q7Z406 1995 aaKnown RBP23.14■■□□□ 1.3
TMED3-201ENST00000299705 DDX21Q9NR30 783 aaKnown RBP eCLIP23.14■■□□□ 1.29
TMED3-201ENST00000299705 PDIA6Q15084 440 aa23.13■■□□□ 1.29
TMED3-201ENST00000299705 ALDH1L2Q3SY69 923 aa23.13■■□□□ 1.29
TMED3-201ENST00000299705 AKT1S1Q96B36 256 aa23.13■■□□□ 1.29
TMED3-201ENST00000299705 ZBTB1Q9Y2K1 713 aa23.13■■□□□ 1.29
TMED3-201ENST00000299705 NBPF26B4DH59 902 aa23.12■■□□□ 1.29
TMED3-201ENST00000299705 RPS6KA4O75676 772 aa23.12■■□□□ 1.29
TMED3-201ENST00000299705 IL6STP40189 918 aaPredicted RBP23.12■■□□□ 1.29
TMED3-201ENST00000299705 NBPF14Q5TI25 921 aa23.12■■□□□ 1.29
TMED3-201ENST00000299705 NBPF10Q6P3W6 841 aaKnown RBP23.12■■□□□ 1.29
TMED3-201ENST00000299705 NBPF15Q8N660 670 aa23.12■■□□□ 1.29
TMED3-201ENST00000299705 AK7Q96M32 723 aa23.12■■□□□ 1.29
TMED3-201ENST00000299705 STK31Q9BXU1 1019 aa23.12■■□□□ 1.29
TMED3-201ENST00000299705 CHPF2Q9P2E5 772 aa23.12■■□□□ 1.29
TMED3-201ENST00000299705 CANXP27824 592 aaKnown RBP23.11■■□□□ 1.29
TMED3-201ENST00000299705 RARSP54136 660 aaKnown RBP23.11■■□□□ 1.29
TMED3-201ENST00000299705 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
TMED3-201ENST00000299705 GNPATO15228 680 aa23.1■■□□□ 1.29
TMED3-201ENST00000299705 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
TMED3-201ENST00000299705 ZNF827Q17R98 1081 aa23.1■■□□□ 1.29
TMED3-201ENST00000299705 HYPKQ9NX55 129 aa23.1■■□□□ 1.29
TMED3-201ENST00000299705 RTCBQ9Y3I0 505 aaKnown RBP23.1■■□□□ 1.29
TMED3-201ENST00000299705 LRP10Q7Z4F1 713 aa23.09■■□□□ 1.29
TMED3-201ENST00000299705 SSH1Q8WYL5 1049 aa23.09■■□□□ 1.29
TMED3-201ENST00000299705 STK32BQ9NY57 414 aa23.09■■□□□ 1.29
TMED3-201ENST00000299705 SLC4A2P04920 1241 aa23.08■■□□□ 1.29
TMED3-201ENST00000299705 PIP4K2AP48426 406 aaPredicted RBP23.08■■□□□ 1.29
TMED3-201ENST00000299705 BRPF1P55201 1214 aaPredicted RBP23.08■■□□□ 1.29
TMED3-201ENST00000299705 SLC15A2Q16348 729 aa23.08■■□□□ 1.29
TMED3-201ENST00000299705 PROSER3Q2NL68 480 aa23.08■■□□□ 1.29
TMED3-201ENST00000299705 ANO8Q9HCE9 1232 aaPredicted RBP23.08■■□□□ 1.29
TMED3-201ENST00000299705 UBR3Q6ZT12 1888 aa23.08■■□□□ 1.28
TMED3-201ENST00000299705 TCERG1O14776 1098 aaKnown RBP23.07■■□□□ 1.28
TMED3-201ENST00000299705 MYL6BP14649 208 aa23.07■■□□□ 1.28
TMED3-201ENST00000299705 ADRA2BP18089 450 aa23.07■■□□□ 1.28
TMED3-201ENST00000299705 SSFA2P28290 1259 aa23.07■■□□□ 1.28
TMED3-201ENST00000299705 TFCP2L1Q9NZI6 479 aa23.07■■□□□ 1.28
TMED3-201ENST00000299705 ANXA1P04083 346 aa23.06■■□□□ 1.28
TMED3-201ENST00000299705 MRPL50Q8N5N7 158 aaKnown RBP23.06■■□□□ 1.28
TMED3-201ENST00000299705 NPM2Q86SE8 214 aaKnown RBP23.05■■□□□ 1.28
TMED3-201ENST00000299705 FLAD1Q8NFF5 587 aa23.05■■□□□ 1.28
TMED3-201ENST00000299705 SMC4Q9NTJ3 1288 aa23.05■■□□□ 1.28
TMED3-201ENST00000299705 RCAN3Q9UKA8 241 aa23.05■■□□□ 1.28
TMED3-201ENST00000299705 QSER1Q2KHR3 1735 aa23.05■■□□□ 1.28
TMED3-201ENST00000299705 A0A087WZG4 1122 aa23.05■■□□□ 1.28
TMED3-201ENST00000299705 AMIGO3Q86WK7 504 aa23.05■■□□□ 1.28
TMED3-201ENST00000299705 COL15A1P39059 1388 aa23.04■■□□□ 1.28
TMED3-201ENST00000299705 TRAPPC3LQ5T215 181 aa23.04■■□□□ 1.28
TMED3-201ENST00000299705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.03■■□□□ 1.28
TMED3-201ENST00000299705 COPS6Q7L5N1 327 aa23.03■■□□□ 1.28
TMED3-201ENST00000299705 BCL2L13Q9BXK5 485 aa23.03■■□□□ 1.28
TMED3-201ENST00000299705 PHAXQ9H814 394 aaKnown RBP23.03■■□□□ 1.28
TMED3-201ENST00000299705 TUBGCP6Q96RT7 1819 aa23.02■■□□□ 1.28
TMED3-201ENST00000299705 XAGE3Q8WTP9 111 aa23.02■■□□□ 1.28
TMED3-201ENST00000299705 ARHGEF1Q92888 912 aaKnown RBP23.02■■□□□ 1.28
TMED3-201ENST00000299705 ZNF330Q9Y3S2 320 aaPredicted RBP23.02■■□□□ 1.28
TMED3-201ENST00000299705 BCAR3O75815 825 aa23.01■■□□□ 1.27
TMED3-201ENST00000299705 FLIIQ13045 1269 aa23.01■■□□□ 1.27
TMED3-201ENST00000299705 PHF14O94880 888 aa23■■□□□ 1.27
TMED3-201ENST00000299705 G2E3Q7L622 706 aa23■■□□□ 1.27
TMED3-201ENST00000299705 DZIP3Q86Y13 1208 aaKnown RBP23■■□□□ 1.27
TMED3-201ENST00000299705 PNPLA7Q6ZV29 1317 aa23■■□□□ 1.27
TMED3-201ENST00000299705 KIF16BQ96L93 1317 aa23■■□□□ 1.27
TMED3-201ENST00000299705 RFC4P35249 363 aa22.99■■□□□ 1.27
TMED3-201ENST00000299705 AIMP1Q12904 312 aaKnown RBP22.99■■□□□ 1.27
TMED3-201ENST00000299705 TTLL7Q6ZT98 887 aa22.99■■□□□ 1.27
TMED3-201ENST00000299705 SMIM5Q71RC9 77 aa22.99■■□□□ 1.27
TMED3-201ENST00000299705 DDX58O95786 925 aaKnown RBP22.98■■□□□ 1.27
TMED3-201ENST00000299705 KIF6Q6ZMV9 814 aa22.98■■□□□ 1.27
TMED3-201ENST00000299705 NARFQ9UHQ1 456 aa22.98■■□□□ 1.27
TMED3-201ENST00000299705 PTPRCP08575 1304 aa22.98■■□□□ 1.27
TMED3-201ENST00000299705 C4AP0C0L4 1744 aa22.98■■□□□ 1.27
TMED3-201ENST00000299705 ERVV-1B6SEH8 477 aa22.98■■□□□ 1.27
TMED3-201ENST00000299705 RGL2O15211 777 aa22.98■■□□□ 1.27
TMED3-201ENST00000299705 ANKRD13DQ6ZTN6 518 aa22.98■■□□□ 1.27
TMED3-201ENST00000299705 COL23A1Q86Y22 540 aaPredicted RBP22.98■■□□□ 1.27
TMED3-201ENST00000299705 ARHGAP45Q92619 1136 aa22.98■■□□□ 1.27
TMED3-201ENST00000299705 TBC1D2BQ9UPU7 963 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms