RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 DOT1LQ8TEK3 1739 aa8.34□□□□□ -1.07
TMC1-201ENST00000297784 KCPQ6ZWJ8 1503 aa8.34□□□□□ -1.07
TMC1-201ENST00000297784 ERVV-2B6SEH9 535 aa8.33□□□□□ -1.08
TMC1-201ENST00000297784 HSP90AB1P08238 724 aaKnown RBP8.33□□□□□ -1.08
TMC1-201ENST00000297784 ARHGAP45Q92619 1136 aa8.33□□□□□ -1.08
TMC1-201ENST00000297784 NECTIN2Q92692 538 aa8.33□□□□□ -1.08
TMC1-201ENST00000297784 THSD7AQ9UPZ6 1657 aa8.33□□□□□ -1.08
TMC1-201ENST00000297784 BECN1Q14457 450 aa8.33□□□□□ -1.08
TMC1-201ENST00000297784 DZIP1LQ8IYY4 767 aaKnown RBP8.33□□□□□ -1.08
TMC1-201ENST00000297784 ZNF496Q96IT1 587 aaPredicted RBP8.33□□□□□ -1.08
TMC1-201ENST00000297784 KIF16BQ96L93 1317 aa8.33□□□□□ -1.08
TMC1-201ENST00000297784 EXOC5O00471 708 aa8.33□□□□□ -1.08
TMC1-201ENST00000297784 TMEM57Q8N5G2 664 aa8.33□□□□□ -1.08
TMC1-201ENST00000297784 MARCH10Q8NA82 808 aaPredicted RBP8.33□□□□□ -1.08
TMC1-201ENST00000297784 NAP1L5Q96NT1 182 aaPredicted RBP8.33□□□□□ -1.08
TMC1-201ENST00000297784 USP21Q9UK80 565 aa8.33□□□□□ -1.08
TMC1-201ENST00000297784 ABCC4O15439 1325 aa8.32□□□□□ -1.08
TMC1-201ENST00000297784 KAT6BQ8WYB5 2073 aa8.32□□□□□ -1.08
TMC1-201ENST00000297784 CABP4P57796 275 aa8.32□□□□□ -1.08
TMC1-201ENST00000297784 ANTXR1Q9H6X2 564 aa8.32□□□□□ -1.08
TMC1-201ENST00000297784 SOS1Q07889 1333 aaPredicted RBP8.32□□□□□ -1.08
TMC1-201ENST00000297784 CANXP27824 592 aaKnown RBP8.32□□□□□ -1.08
TMC1-201ENST00000297784 MVPQ14764 893 aaKnown RBP8.32□□□□□ -1.08
TMC1-201ENST00000297784 PDIA6Q15084 440 aa8.32□□□□□ -1.08
TMC1-201ENST00000297784 FAM98CQ17RN3 349 aaKnown RBP8.32□□□□□ -1.08
TMC1-201ENST00000297784 PIGBQ92521 554 aa8.32□□□□□ -1.08
TMC1-201ENST00000297784 HOXB7P09629 217 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 XRCC6P12956 609 aaKnown RBP eCLIP8.31□□□□□ -1.08
TMC1-201ENST00000297784 PHAXQ9H814 394 aaKnown RBP8.31□□□□□ -1.08
TMC1-201ENST00000297784 LAMB4A4D0S4 1761 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 N4BP2Q86UW6 1770 aaPredicted RBP8.31□□□□□ -1.08
TMC1-201ENST00000297784 PROSER3Q2NL68 480 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 BCL9O00512 1426 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 AFF2P51816 1311 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 GOLGA6L3A6NEY3 463 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 EIF2S2P20042 333 aaKnown RBP8.31□□□□□ -1.08
TMC1-201ENST00000297784 DDB1Q16531 1140 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 CCDC30Q5VVM6 783 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 LRP10Q7Z4F1 713 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 CDCA7Q9BWT1 371 aaPredicted RBP8.31□□□□□ -1.08
TMC1-201ENST00000297784 CHPF2Q9P2E5 772 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 USP16Q9Y5T5 823 aa8.31□□□□□ -1.08
TMC1-201ENST00000297784 ZBTB7BO15156 539 aaPredicted RBP8.3□□□□□ -1.08
TMC1-201ENST00000297784 IPO8O15397 1037 aaKnown RBP8.3□□□□□ -1.08
TMC1-201ENST00000297784 ANXA1P04083 346 aa8.3□□□□□ -1.08
TMC1-201ENST00000297784 HDGFL1Q5TGJ6 251 aa8.3□□□□□ -1.08
TMC1-201ENST00000297784 ASAP1Q9ULH1 1129 aa8.3□□□□□ -1.08
TMC1-201ENST00000297784 ISY1Q9ULR0 285 aaKnown RBP8.3□□□□□ -1.08
TMC1-201ENST00000297784 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
TMC1-201ENST00000297784 ATRNO75882 1429 aa8.3□□□□□ -1.08
TMC1-201ENST00000297784 CCDC9Q9Y3X0 531 aaKnown RBP8.3□□□□□ -1.08
TMC1-201ENST00000297784 F6X3S4 739 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 ONECUT3O60422 494 aaPredicted RBP8.29□□□□□ -1.08
TMC1-201ENST00000297784 IGHDP01880 384 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 FTSJ3Q8IY81 847 aaKnown RBP8.29□□□□□ -1.08
TMC1-201ENST00000297784 GJD4Q96KN9 370 aaPredicted RBP8.29□□□□□ -1.08
TMC1-201ENST00000297784 ATG3Q9NT62 314 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 ZBTB40Q9NUA8 1239 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 PTPRCP08575 1304 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 TPM2P07951 284 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 FLIIQ13045 1269 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 SLC4A9Q96Q91 983 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 SBF2Q86WG5 1849 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 INTS3Q68E01 1043 aaKnown RBP8.29□□□□□ -1.08
TMC1-201ENST00000297784 BRWD3Q6RI45 1802 aa8.29□□□□□ -1.08
TMC1-201ENST00000297784 PRIM1P49642 420 aaKnown RBP8.28□□□□□ -1.08
TMC1-201ENST00000297784 PTF1AQ7RTS3 328 aa8.28□□□□□ -1.08
TMC1-201ENST00000297784 ITPRIPQ8IWB1 547 aa8.28□□□□□ -1.08
TMC1-201ENST00000297784 KCNQ2O43526 872 aa8.28□□□□□ -1.08
TMC1-201ENST00000297784 MRE11P49959 708 aa8.28□□□□□ -1.08
TMC1-201ENST00000297784 MEX3CQ5U5Q3 659 aaKnown RBP8.28□□□□□ -1.08
TMC1-201ENST00000297784 FMNL2Q96PY5 1086 aa8.28□□□□□ -1.08
TMC1-201ENST00000297784 TMOD3Q9NYL9 352 aa8.28□□□□□ -1.08
TMC1-201ENST00000297784 TJP1Q07157 1748 aa8.28□□□□□ -1.08
TMC1-201ENST00000297784 SNRPA1P09661 255 aaKnown RBP8.27□□□□□ -1.08
TMC1-201ENST00000297784 PIP4K2AP48426 406 aaPredicted RBP8.27□□□□□ -1.08
TMC1-201ENST00000297784 TTC5Q8N0Z6 440 aa8.27□□□□□ -1.08
TMC1-201ENST00000297784 STK31Q9BXU1 1019 aa8.27□□□□□ -1.08
TMC1-201ENST00000297784 PTCD1O75127 700 aaKnown RBP8.27□□□□□ -1.09
TMC1-201ENST00000297784 API5Q9BZZ5 524 aaKnown RBP8.27□□□□□ -1.09
TMC1-201ENST00000297784 PDCL3Q9H2J4 239 aa8.27□□□□□ -1.09
TMC1-201ENST00000297784 DBF4Q9UBU7 674 aaPredicted RBP8.27□□□□□ -1.09
TMC1-201ENST00000297784 DDX19BQ9UMR2 479 aa8.27□□□□□ -1.09
TMC1-201ENST00000297784 ADCY9O60503 1353 aa8.27□□□□□ -1.09
TMC1-201ENST00000297784 NBPF26B4DH59 902 aa8.27□□□□□ -1.09
TMC1-201ENST00000297784 GOLGB1Q14789 3259 aaKnown RBP8.27□□□□□ -1.09
TMC1-201ENST00000297784 FAM182BQ5T319 152 aa8.27□□□□□ -1.09
TMC1-201ENST00000297784 NBPF14Q5TI25 921 aa8.27□□□□□ -1.09
TMC1-201ENST00000297784 NBPF10Q6P3W6 841 aaKnown RBP8.27□□□□□ -1.09
TMC1-201ENST00000297784 NBPF15Q8N660 670 aa8.27□□□□□ -1.09
TMC1-201ENST00000297784 ACSBG1Q96GR2 724 aa8.27□□□□□ -1.09
TMC1-201ENST00000297784 QTRT2Q9H974 415 aaKnown RBP8.26□□□□□ -1.09
TMC1-201ENST00000297784 FKBP5Q13451 457 aaPredicted RBP8.26□□□□□ -1.09
TMC1-201ENST00000297784 DDX21Q9NR30 783 aaKnown RBP eCLIP8.26□□□□□ -1.09
TMC1-201ENST00000297784 NUP188Q5SRE5 1749 aa8.26□□□□□ -1.09
TMC1-201ENST00000297784 MCM4P33991 863 aa8.25□□□□□ -1.09
TMC1-201ENST00000297784 SIRT2Q8IXJ6 389 aa8.25□□□□□ -1.09
TMC1-201ENST00000297784 TRPC5Q9UL62 973 aaPredicted RBP8.25□□□□□ -1.09
TMC1-201ENST00000297784 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
TMC1-201ENST00000297784 MYH14Q7Z406 1995 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms