RNA–Protein interactions for RNA: ENST00000296031.4

CXCL2-201, Transcript of C-X-C motif chemokine ligand 2, humanhuman

TSL 1 (best)

Gene CXCL2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL2-201ENST00000296031 MIS18AQ9NYP9 233 aa32.86■■■□□ 2.85
CXCL2-201ENST00000296031 STARD3NLO95772 234 aa32.85■■■□□ 2.85
CXCL2-201ENST00000296031 ARHGEF1Q92888 912 aaKnown RBP32.85■■■□□ 2.85
CXCL2-201ENST00000296031 KDM3BQ7LBC6 1761 aa32.84■■■□□ 2.85
CXCL2-201ENST00000296031 RFC4P35249 363 aa32.82■■■□□ 2.84
CXCL2-201ENST00000296031 ZBTB1Q9Y2K1 713 aa32.82■■■□□ 2.84
CXCL2-201ENST00000296031 FHDC1Q9C0D6 1143 aaPredicted RBP32.81■■■□□ 2.84
CXCL2-201ENST00000296031 SOS1Q07889 1333 aaPredicted RBP32.79■■■□□ 2.84
CXCL2-201ENST00000296031 TRIM35Q9UPQ4 493 aa32.79■■■□□ 2.84
CXCL2-201ENST00000296031 APAF1O14727 1248 aa32.78■■■□□ 2.84
CXCL2-201ENST00000296031 SNRPA1P09661 255 aaKnown RBP32.78■■■□□ 2.84
CXCL2-201ENST00000296031 CANXP27824 592 aaKnown RBP32.78■■■□□ 2.84
CXCL2-201ENST00000296031 KLHL34Q8N239 644 aa32.77■■■□□ 2.84
CXCL2-201ENST00000296031 PRAMEF22A3QJZ6 481 aa32.76■■■□□ 2.83
CXCL2-201ENST00000296031 COL15A1P39059 1388 aa32.75■■■□□ 2.83
CXCL2-201ENST00000296031 SRP68Q9UHB9 627 aaKnown RBP32.75■■■□□ 2.83
CXCL2-201ENST00000296031 NLGN1Q8N2Q7 840 aa32.74■■■□□ 2.83
CXCL2-201ENST00000296031 TSPYL4Q9UJ04 414 aa32.74■■■□□ 2.83
CXCL2-201ENST00000296031 USP16Q9Y5T5 823 aa32.74■■■□□ 2.83
CXCL2-201ENST00000296031 GYS1P13807 737 aa32.73■■■□□ 2.83
CXCL2-201ENST00000296031 SYT17Q9BSW7 474 aa32.73■■■□□ 2.83
CXCL2-201ENST00000296031 BABAM1Q9NWV8 329 aa32.73■■■□□ 2.83
CXCL2-201ENST00000296031 USP42Q9H9J4 1324 aaKnown RBP32.73■■■□□ 2.83
CXCL2-201ENST00000296031 A1BGP04217 495 aa32.72■■■□□ 2.83
CXCL2-201ENST00000296031 EIF4A1P60842 406 aaKnown RBP32.72■■■□□ 2.83
CXCL2-201ENST00000296031 LAMB4A4D0S4 1761 aa32.71■■■□□ 2.83
CXCL2-201ENST00000296031 ZPR1O75312 459 aa32.7■■■□□ 2.83
CXCL2-201ENST00000296031 EIF5P55010 431 aaKnown RBP32.7■■■□□ 2.83
CXCL2-201ENST00000296031 ZNF330Q9Y3S2 320 aaPredicted RBP32.7■■■□□ 2.83
CXCL2-201ENST00000296031 MMP10P09238 476 aa32.69■■■□□ 2.82
CXCL2-201ENST00000296031 IL6STP40189 918 aaPredicted RBP32.68■■■□□ 2.82
CXCL2-201ENST00000296031 LAS1LQ9Y4W2 734 aaKnown RBP32.68■■■□□ 2.82
CXCL2-201ENST00000296031 GIGYF1O75420 1035 aaPredicted RBP32.67■■■□□ 2.82
CXCL2-201ENST00000296031 USPL1Q5W0Q7 1092 aa32.67■■■□□ 2.82
CXCL2-201ENST00000296031 NARFQ9UHQ1 456 aa32.67■■■□□ 2.82
CXCL2-201ENST00000296031 PIP4K2AP48426 406 aaPredicted RBP32.66■■■□□ 2.82
CXCL2-201ENST00000296031 A0A087WZG4 1122 aa32.65■■■□□ 2.82
CXCL2-201ENST00000296031 CHL1O00533 1208 aa32.65■■■□□ 2.82
CXCL2-201ENST00000296031 FKBP8Q14318 412 aa32.65■■■□□ 2.82
CXCL2-201ENST00000296031 SENP3-EIF4A1A0A087X0R7 540 aa32.64■■■□□ 2.82
CXCL2-201ENST00000296031 NPM2Q86SE8 214 aaKnown RBP32.64■■■□□ 2.82
CXCL2-201ENST00000296031 FAM9BQ8IZU0 186 aa32.61■■■□□ 2.81
CXCL2-201ENST00000296031 NLGN2Q8NFZ4 835 aa32.61■■■□□ 2.81
CXCL2-201ENST00000296031 CFAP44Q96MT7 982 aa32.61■■■□□ 2.81
CXCL2-201ENST00000296031 CALD1Q05682 793 aaKnown RBP32.6■■■□□ 2.81
CXCL2-201ENST00000296031 TBC1D2BQ9UPU7 963 aa32.6■■■□□ 2.81
CXCL2-201ENST00000296031 CD2APQ9Y5K6 639 aa32.6■■■□□ 2.81
CXCL2-201ENST00000296031 PARP3Q9Y6F1 533 aa32.6■■■□□ 2.81
CXCL2-201ENST00000296031 SCN7AQ01118 1682 aa32.59■■■□□ 2.81
CXCL2-201ENST00000296031 NBPF26B4DH59 902 aa32.59■■■□□ 2.81
CXCL2-201ENST00000296031 NBPF10Q6P3W6 841 aaKnown RBP32.59■■■□□ 2.81
CXCL2-201ENST00000296031 NBPF15Q8N660 670 aa32.59■■■□□ 2.81
CXCL2-201ENST00000296031 DCAF8L1A6NGE4 600 aa32.57■■■□□ 2.8
CXCL2-201ENST00000296031 BCL2L12Q9HB09 334 aa32.57■■■□□ 2.8
CXCL2-201ENST00000296031 CCDC27Q2M243 656 aa32.56■■■□□ 2.8
CXCL2-201ENST00000296031 ZNF853P0CG23 659 aa32.55■■■□□ 2.8
CXCL2-201ENST00000296031 TM4SF1P30408 202 aa32.55■■■□□ 2.8
CXCL2-201ENST00000296031 DDR1Q08345 913 aa32.55■■■□□ 2.8
CXCL2-201ENST00000296031 NCBP3Q53F19 620 aaKnown RBP32.55■■■□□ 2.8
CXCL2-201ENST00000296031 DZIP3Q86Y13 1208 aaKnown RBP32.55■■■□□ 2.8
CXCL2-201ENST00000296031 IFT57Q9NWB7 429 aa32.55■■■□□ 2.8
CXCL2-201ENST00000296031 BCORQ6W2J9 1755 aa32.55■■■□□ 2.8
CXCL2-201ENST00000296031 GNAI1P63096 354 aa32.53■■■□□ 2.8
CXCL2-201ENST00000296031 MBIPQ9NS73 344 aa32.53■■■□□ 2.8
CXCL2-201ENST00000296031 KIF13BQ9NQT8 1826 aa32.52■■■□□ 2.8
CXCL2-201ENST00000296031 CAMTA2O94983 1202 aa32.52■■■□□ 2.8
CXCL2-201ENST00000296031 NFIXQ14938 502 aa32.52■■■□□ 2.8
CXCL2-201ENST00000296031 KRT24Q2M2I5 525 aa32.52■■■□□ 2.8
CXCL2-201ENST00000296031 POLRMTO00411 1230 aaKnown RBP32.51■■■□□ 2.79
CXCL2-201ENST00000296031 EIF2S2P20042 333 aaKnown RBP32.51■■■□□ 2.79
CXCL2-201ENST00000296031 WWC1Q8IX03 1113 aa32.51■■■□□ 2.79
CXCL2-201ENST00000296031 C10orf71Q711Q0 1435 aa32.51■■■□□ 2.79
CXCL2-201ENST00000296031 BICDL1Q6ZP65 573 aa32.5■■■□□ 2.79
CXCL2-201ENST00000296031 MYL6BP14649 208 aa32.49■■■□□ 2.79
CXCL2-201ENST00000296031 NGEFQ8N5V2 710 aa32.49■■■□□ 2.79
CXCL2-201ENST00000296031 AFDNP55196 1824 aaKnown RBP32.49■■■□□ 2.79
CXCL2-201ENST00000296031 ERBB4Q15303 1308 aa32.49■■■□□ 2.79
CXCL2-201ENST00000296031 PELP1Q8IZL8 1130 aaKnown RBP32.48■■■□□ 2.79
CXCL2-201ENST00000296031 SALL2Q9Y467 1007 aaPredicted RBP32.48■■■□□ 2.79
CXCL2-201ENST00000296031 CCER2I3L3R5 266 aa32.47■■■□□ 2.79
CXCL2-201ENST00000296031 TBC1D9BQ66K14 1250 aa32.47■■■□□ 2.79
CXCL2-201ENST00000296031 NECTIN2Q92692 538 aa32.47■■■□□ 2.79
CXCL2-201ENST00000296031 DIEXFQ68CQ4 756 aaKnown RBP32.46■■■□□ 2.79
CXCL2-201ENST00000296031 GPR162Q16538 588 aa32.45■■■□□ 2.79
CXCL2-201ENST00000296031 NRXN2Q9P2S2 1712 aa32.44■■■□□ 2.78
CXCL2-201ENST00000296031 HOXB7P09629 217 aa32.44■■■□□ 2.78
CXCL2-201ENST00000296031 N4BP2Q86UW6 1770 aaPredicted RBP32.44■■■□□ 2.78
CXCL2-201ENST00000296031 KIAA1551Q9HCM1 1747 aa32.43■■■□□ 2.78
CXCL2-201ENST00000296031 SERPINB2P05120 415 aa32.43■■■□□ 2.78
CXCL2-201ENST00000296031 PDIA6Q15084 440 aa32.43■■■□□ 2.78
CXCL2-201ENST00000296031 CLEC4GQ6UXB4 293 aa32.43■■■□□ 2.78
CXCL2-201ENST00000296031 ZNF652Q9Y2D9 606 aa32.43■■■□□ 2.78
CXCL2-201ENST00000296031 DUSP27Q5VZP5 1158 aa32.42■■■□□ 2.78
CXCL2-201ENST00000296031 PXDNLA1KZ92 1463 aa32.42■■■□□ 2.78
CXCL2-201ENST00000296031 RGL2O15211 777 aa32.41■■■□□ 2.78
CXCL2-201ENST00000296031 TGFB2P61812 414 aa32.41■■■□□ 2.78
CXCL2-201ENST00000296031 ANXA1P04083 346 aa32.4■■■□□ 2.78
CXCL2-201ENST00000296031 PROSER3Q2NL68 480 aa32.4■■■□□ 2.78
CXCL2-201ENST00000296031 HDGFL1Q5TGJ6 251 aa32.4■■■□□ 2.78
CXCL2-201ENST00000296031 KIF6Q6ZMV9 814 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms