RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 TEX13AQ9BXU3 409 aaPredicted RBP35.79■■■■□ 3.32
CHCHD4-201ENST00000295767 C4BP0C0L5 1744 aa35.79■■■■□ 3.32
CHCHD4-201ENST00000295767 LINC00116Q8NCU8 138 aa35.78■■■■□ 3.32
CHCHD4-201ENST00000295767 EIF2S2P20042 333 aaKnown RBP35.77■■■■□ 3.32
CHCHD4-201ENST00000295767 CYP19A1P11511 503 aaPredicted RBP35.76■■■■□ 3.32
CHCHD4-201ENST00000295767 NECTIN2Q92692 538 aa35.76■■■■□ 3.32
CHCHD4-201ENST00000295767 HDGFL1Q5TGJ6 251 aa35.75■■■■□ 3.31
CHCHD4-201ENST00000295767 STARD3NLO95772 234 aa35.74■■■■□ 3.31
CHCHD4-201ENST00000295767 CT47B1P0C2W7 299 aaPredicted RBP35.73■■■■□ 3.31
CHCHD4-201ENST00000295767 CACNA1FO60840 1977 aa35.73■■■■□ 3.31
CHCHD4-201ENST00000295767 CRKLP46109 303 aaKnown RBP35.71■■■■□ 3.31
CHCHD4-201ENST00000295767 A1BGP04217 495 aa35.69■■■■□ 3.3
CHCHD4-201ENST00000295767 CNTNAP4Q9C0A0 1308 aa35.69■■■■□ 3.3
CHCHD4-201ENST00000295767 TCERG1O14776 1098 aaKnown RBP35.68■■■■□ 3.3
CHCHD4-201ENST00000295767 CCDC30Q5VVM6 783 aa35.68■■■■□ 3.3
CHCHD4-201ENST00000295767 UBR3Q6ZT12 1888 aa35.68■■■■□ 3.3
CHCHD4-201ENST00000295767 PIP4K2AP48426 406 aaPredicted RBP35.68■■■■□ 3.3
CHCHD4-201ENST00000295767 CCDC87Q9NVE4 849 aa35.68■■■■□ 3.3
CHCHD4-201ENST00000295767 INTS5Q6P9B9 1019 aaKnown RBP35.67■■■■□ 3.3
CHCHD4-201ENST00000295767 ZBTB1Q9Y2K1 713 aa35.67■■■■□ 3.3
CHCHD4-201ENST00000295767 TUBGCP6Q96RT7 1819 aa35.67■■■■□ 3.3
CHCHD4-201ENST00000295767 ZNF428Q96B54 188 aa35.66■■■■□ 3.3
CHCHD4-201ENST00000295767 CHMP4AQ9BY43 222 aa35.66■■■■□ 3.3
CHCHD4-201ENST00000295767 CHPF2Q9P2E5 772 aa35.66■■■■□ 3.3
CHCHD4-201ENST00000295767 NBPF26B4DH59 902 aa35.65■■■■□ 3.3
CHCHD4-201ENST00000295767 NBPF14Q5TI25 921 aa35.65■■■■□ 3.3
CHCHD4-201ENST00000295767 NBPF10Q6P3W6 841 aaKnown RBP35.65■■■■□ 3.3
CHCHD4-201ENST00000295767 NBPF15Q8N660 670 aa35.65■■■■□ 3.3
CHCHD4-201ENST00000295767 ERBB4Q15303 1308 aa35.65■■■■□ 3.3
CHCHD4-201ENST00000295767 PDIA6Q15084 440 aa35.65■■■■□ 3.3
CHCHD4-201ENST00000295767 RC3H1Q5TC82 1133 aaKnown RBP35.65■■■■□ 3.3
CHCHD4-201ENST00000295767 ANXA1P04083 346 aa35.63■■■■□ 3.29
CHCHD4-201ENST00000295767 HMGB2P26583 209 aaKnown RBP35.63■■■■□ 3.29
CHCHD4-201ENST00000295767 PROSER3Q2NL68 480 aa35.63■■■■□ 3.29
CHCHD4-201ENST00000295767 DBF4Q9UBU7 674 aaPredicted RBP35.63■■■■□ 3.29
CHCHD4-201ENST00000295767 CANXP27824 592 aaKnown RBP35.62■■■■□ 3.29
CHCHD4-201ENST00000295767 SSH1Q8WYL5 1049 aa35.62■■■■□ 3.29
CHCHD4-201ENST00000295767 STK31Q9BXU1 1019 aa35.62■■■■□ 3.29
CHCHD4-201ENST00000295767 RARSP54136 660 aaKnown RBP35.61■■■■□ 3.29
CHCHD4-201ENST00000295767 AK7Q96M32 723 aa35.61■■■■□ 3.29
CHCHD4-201ENST00000295767 DDX21Q9NR30 783 aaKnown RBP eCLIP35.61■■■■□ 3.29
CHCHD4-201ENST00000295767 MYL6BP14649 208 aa35.61■■■■□ 3.29
CHCHD4-201ENST00000295767 BCL2L13Q9BXK5 485 aa35.61■■■■□ 3.29
CHCHD4-201ENST00000295767 ZNF827Q17R98 1081 aa35.6■■■■□ 3.29
CHCHD4-201ENST00000295767 ALDH1L2Q3SY69 923 aa35.6■■■■□ 3.29
CHCHD4-201ENST00000295767 GNPATO15228 680 aa35.59■■■■□ 3.29
CHCHD4-201ENST00000295767 AKT1S1Q96B36 256 aa35.59■■■■□ 3.29
CHCHD4-201ENST00000295767 LRP10Q7Z4F1 713 aa35.58■■■■□ 3.29
CHCHD4-201ENST00000295767 ANO8Q9HCE9 1232 aaPredicted RBP35.58■■■■□ 3.29
CHCHD4-201ENST00000295767 SLC4A2P04920 1241 aa35.57■■■■□ 3.29
CHCHD4-201ENST00000295767 SMC4Q9NTJ3 1288 aa35.57■■■■□ 3.29
CHCHD4-201ENST00000295767 C4AP0C0L4 1744 aa35.57■■■■□ 3.28
CHCHD4-201ENST00000295767 RCAN3Q9UKA8 241 aa35.57■■■■□ 3.28
CHCHD4-201ENST00000295767 QSER1Q2KHR3 1735 aa35.56■■■■□ 3.28
CHCHD4-201ENST00000295767 RPS6KA4O75676 772 aa35.56■■■■□ 3.28
CHCHD4-201ENST00000295767 IL6STP40189 918 aaPredicted RBP35.56■■■■□ 3.28
CHCHD4-201ENST00000295767 AMIGO3Q86WK7 504 aa35.56■■■■□ 3.28
CHCHD4-201ENST00000295767 MRPL50Q8N5N7 158 aaKnown RBP35.55■■■■□ 3.28
CHCHD4-201ENST00000295767 ZNF330Q9Y3S2 320 aaPredicted RBP35.55■■■■□ 3.28
CHCHD4-201ENST00000295767 EIF5P55010 431 aaKnown RBP35.54■■■■□ 3.28
CHCHD4-201ENST00000295767 SMIM5Q71RC9 77 aa35.54■■■■□ 3.28
CHCHD4-201ENST00000295767 HYPKQ9NX55 129 aa35.54■■■■□ 3.28
CHCHD4-201ENST00000295767 BCAR3O75815 825 aa35.54■■■■□ 3.28
CHCHD4-201ENST00000295767 PHAXQ9H814 394 aaKnown RBP35.54■■■■□ 3.28
CHCHD4-201ENST00000295767 RTCBQ9Y3I0 505 aaKnown RBP35.54■■■■□ 3.28
CHCHD4-201ENST00000295767 COL15A1P39059 1388 aa35.53■■■■□ 3.28
CHCHD4-201ENST00000295767 G2E3Q7L622 706 aa35.52■■■■□ 3.28
CHCHD4-201ENST00000295767 STK32BQ9NY57 414 aa35.51■■■■□ 3.28
CHCHD4-201ENST00000295767 SLC15A2Q16348 729 aa35.5■■■■□ 3.27
CHCHD4-201ENST00000295767 TFCP2L1Q9NZI6 479 aa35.5■■■■□ 3.27
CHCHD4-201ENST00000295767 PHF14O94880 888 aa35.49■■■■□ 3.27
CHCHD4-201ENST00000295767 XAGE3Q8WTP9 111 aa35.49■■■■□ 3.27
CHCHD4-201ENST00000295767 BRPF1P55201 1214 aaPredicted RBP35.48■■■■□ 3.27
CHCHD4-201ENST00000295767 COPS6Q7L5N1 327 aa35.48■■■■□ 3.27
CHCHD4-201ENST00000295767 BCORQ6W2J9 1755 aa35.48■■■■□ 3.27
CHCHD4-201ENST00000295767 SSFA2P28290 1259 aa35.47■■■■□ 3.27
CHCHD4-201ENST00000295767 AIMP1Q12904 312 aaKnown RBP35.47■■■■□ 3.27
CHCHD4-201ENST00000295767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.46■■■■□ 3.27
CHCHD4-201ENST00000295767 FLIIQ13045 1269 aa35.46■■■■□ 3.27
CHCHD4-201ENST00000295767 NPM2Q86SE8 214 aaKnown RBP35.46■■■■□ 3.27
CHCHD4-201ENST00000295767 ARFGEF2Q9Y6D5 1785 aa35.46■■■■□ 3.27
CHCHD4-201ENST00000295767 TTLL7Q6ZT98 887 aa35.46■■■■□ 3.27
CHCHD4-201ENST00000295767 SCN7AQ01118 1682 aa35.45■■■■□ 3.27
CHCHD4-201ENST00000295767 SOCS7O14512 581 aa35.44■■■■□ 3.26
CHCHD4-201ENST00000295767 ADRA2BP18089 450 aa35.44■■■■□ 3.26
CHCHD4-201ENST00000295767 ARHGEF1Q92888 912 aaKnown RBP35.44■■■■□ 3.26
CHCHD4-201ENST00000295767 TRAPPC3LQ5T215 181 aa35.43■■■■□ 3.26
CHCHD4-201ENST00000295767 DZIP3Q86Y13 1208 aaKnown RBP35.43■■■■□ 3.26
CHCHD4-201ENST00000295767 TBC1D2BQ9UPU7 963 aa35.43■■■■□ 3.26
CHCHD4-201ENST00000295767 PNPLA7Q6ZV29 1317 aa35.43■■■■□ 3.26
CHCHD4-201ENST00000295767 KIF16BQ96L93 1317 aa35.43■■■■□ 3.26
CHCHD4-201ENST00000295767 NUP98P52948 1817 aa35.43■■■■□ 3.26
CHCHD4-201ENST00000295767 CENPBP07199 599 aaPredicted RBP35.43■■■■□ 3.26
CHCHD4-201ENST00000295767 ARXQ96QS3 562 aa35.43■■■■□ 3.26
CHCHD4-201ENST00000295767 A0A087WZG4 1122 aa35.42■■■■□ 3.26
CHCHD4-201ENST00000295767 NOB1Q9ULX3 412 aaKnown RBP35.42■■■■□ 3.26
CHCHD4-201ENST00000295767 FKBP5Q13451 457 aaPredicted RBP35.4■■■■□ 3.26
CHCHD4-201ENST00000295767 KIF6Q6ZMV9 814 aa35.39■■■■□ 3.26
CHCHD4-201ENST00000295767 FRAT1Q92837 279 aaPredicted RBP35.39■■■■□ 3.26
CHCHD4-201ENST00000295767 PTPRCP08575 1304 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms